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The map label for this gene is 226222797

Identifier: 226222797

GI number: 226222797

Start: 164883

End: 165272

Strand: Direct

Name: 226222797

Synonym: Lm4b_00165

Alternate gene names: NA

Gene position: 164883-165272 (Clockwise)

Preceding gene: 226222796

Following gene: 226222798

Centisome position: 5.66

GC content: 39.74

Gene sequence:

>390_bases
TTGGATAAAAAAGCTATTTTTGACTCAGTCAGTAATATGGAGGAGCAAATTGGCGAATTGTATCAGCAACTTGGAGATCT
AAAGACAAACTTAGGCGAAATGTTGGAAGAAAATAACCGATTAAACCTTGAAAACGAACATTTGCGACGCAGACTTTCTT
TGACGGATGAAGCGACACCAGAACCTAAAGCCGAAATAGAGGCGGAACACGGTGTGATGGCGCCTAATCGTAAGGAAGCA
ATGCAGCAAATGATTGAACTTGGGGAAGGTTATGACAATCTTGTCCAACTTTACAAGGAAGGATTTCATGTTTGCAATGT
ACATTTCGGCAGCCCGCGTGGTAATGATGAAGATTGTTTATTTTGCTTATCCTTGCTCAATAAAAAATAA

Upstream 100 bases:

>100_bases
AGTTTGCCCGAAGAAGAGACGGTTATAGAATACGAGTTGGATGAGTTACGTCCATATAACGAATTTCTAAAACAACCGGC
AAAGTCTTGAGGTGAAAAAA

Downstream 100 bases:

>100_bases
CATGACGGGCCTTTCTCAATTCAAGAGAAGGGCTTTTTGCTAGAAAAGGTGAATCATTTGGAAAAACTCGAATTAATTGG
TGATGAAAGACTAGATTATT

Product: DNA replication intiation control protein YabA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAEIEAEHGVMAPNRKEA
MQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK

Sequences:

>Translated_129_residues
MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAEIEAEHGVMAPNRKEA
MQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
>Mature_129_residues
MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAEIEAEHGVMAPNRKEA
MQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK

Specific function: Involved in initiation control of chromosome replication [H]

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010377 [H]

Pfam domain/function: PF06156 DUF972 [H]

EC number: NA

Molecular weight: Translated: 14797; Mature: 14797

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
EPKAEIEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCL
CCCHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
FCLSLLNKK
HHHHHHCCC
>Mature Secondary Structure
MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
EPKAEIEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCL
CCCHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
FCLSLLNKK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]