| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226222766
Identifier: 226222766
GI number: 226222766
Start: 132419
End: 132955
Strand: Direct
Name: 226222766
Synonym: Lm4b_00131
Alternate gene names: NA
Gene position: 132419-132955 (Clockwise)
Preceding gene: 226222765
Following gene: 226222767
Centisome position: 4.55
GC content: 35.94
Gene sequence:
>537_bases ATGACTAAAATTGTAAAAATGTCAGAGAAAAACGAACATGGAACTCTAGAACAATTCTATCCAGAAACACATGCAGAGGC TGTTAAAGGACTTGTGTCGGTTTCAGAGGAAGAGAAGGCGACATGGAACGAGAAAGAAACTACTGCGGGTGCGGAACAAA AGGCGAATACTGCTTTGAATAGTGTGAAGGATTATGTTGATACGATTGGAAAAGGAACAGTAATATTTAAAGGGGCCAAT ATTATGGCTGCTGGTCAAAAATATACATGGAATTCTTCCAAACTGAAATTTGGAATCACTTTATTATTCAGTCGTTACGA TTCAGCAAATAATACTCCTTTAGATTATTATTATCACTCTGTTTTCTTATCGAAAGCTCAATTAGCAGAATTAGCAGGTA AAGGTTTGTTAGTTCCTATGCCCTCAGCAACTTATGGGGAAAGAAAATATTTATATGTTTCTGAAACAGAAGTTGCTGGA CACAATGATAATACTAATAATGCTTCTTGGGCATTACGTCAGCTAACTGTAATGTAA
Upstream 100 bases:
>100_bases AAGCAACTACTACAGAAAGTGGTTTTTTGGCAAAAGAGGACAAAGAAAAACTAGACGCGATGCAAATAATCGCGCTGGAA ACTATTAAGGAGGTTATAGA
Downstream 100 bases:
>100_bases CTAAAAAGGAGGTTTTCCATGGAAGTCATACTAAAAATTGGGATTTTAGGTTTTGGCGCGATATTTGGATACTTGTTTGG GGAAGTGGATTTATTGGTAA
Product: protein gp20 from Bacteriophage A118
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNEKETTAGAEQKANTALNSVKDYVDTIGKGTVIFKGAN IMAAGQKYTWNSSKLKFGITLLFSRYDSANNTPLDYYYHSVFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAG HNDNTNNASWALRQLTVM
Sequences:
>Translated_178_residues MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNEKETTAGAEQKANTALNSVKDYVDTIGKGTVIFKGAN IMAAGQKYTWNSSKLKFGITLLFSRYDSANNTPLDYYYHSVFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAG HNDNTNNASWALRQLTVM >Mature_177_residues TKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNEKETTAGAEQKANTALNSVKDYVDTIGKGTVIFKGANI MAAGQKYTWNSSKLKFGITLLFSRYDSANNTPLDYYYHSVFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAGH NDNTNNASWALRQLTVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19745; Mature: 19614
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNEKETTAGAEQKANTALN CCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCHHCCCCHHHHHHHHH SVKDYVDTIGKGTVIFKGANIMAAGQKYTWNSSKLKFGITLLFSRYDSANNTPLDYYYHS HHHHHHHHCCCCEEEEECCCEEECCCEEECCCCCEEEHEEEEEECCCCCCCCCHHHHHHH VFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAGHNDNTNNASWALRQLTVM HHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCEECCCCCCCCCHHHHEEEEECC >Mature Secondary Structure TKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNEKETTAGAEQKANTALN CCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCHHCCCCHHHHHHHHH SVKDYVDTIGKGTVIFKGANIMAAGQKYTWNSSKLKFGITLLFSRYDSANNTPLDYYYHS HHHHHHHHCCCCEEEEECCCEEECCCEEECCCCCEEEHEEEEEECCCCCCCCCHHHHHHH VFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAGHNDNTNNASWALRQLTVM HHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCEECCCCCCCCCHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA