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The map label for this gene is 226222767

Identifier: 226222767

GI number: 226222767

Start: 132974

End: 133396

Strand: Direct

Name: 226222767

Synonym: Lm4b_00132

Alternate gene names: NA

Gene position: 132974-133396 (Clockwise)

Preceding gene: 226222766

Following gene: 226222768

Centisome position: 4.57

GC content: 38.06

Gene sequence:

>423_bases
ATGGAAGTCATACTAAAAATTGGGATTTTAGGTTTTGGCGCGATATTTGGATACTTGTTTGGGGAAGTGGATTTATTGGT
AAAAGTGCTGGTGTGCTTTATTGTAGCTGACTATATTTCTGGGCTACTCGCTTCAGGGTATCTTGGGGAACTTAGCAGCA
AAATGGGTTTCAAAGGAATCGCGAAAAAAATCGCTATCTTAATTTTAGTGGCTATTGCGCATCAAATAGATTTGATTCTT
GGAACGCATAATACAACGCGGGATGCGGTTATCTTTTTCTATTTGGCGAATGAGCTGATTTCCATATTGGAAAATTTCGT
TCGAATGGGGATGAAGGTCCCGGAAGTATTGAAAAATTTAATTTTGATTTTCGATGCAAAGTCAGGAGAGGATGAGGAAA
AACATGACAAAGATATGGATTGA

Upstream 100 bases:

>100_bases
TGTTTCTGAAACAGAAGTTGCTGGACACAATGATAATACTAATAATGCTTCTTGGGCATTACGTCAGCTAACTGTAATGT
AACTAAAAAGGAGGTTTTCC

Downstream 100 bases:

>100_bases
CGCTGGACACGGTGGTAAGGATTCAGGTGCGAGTGGTAATGGACTTGTTGAAAAAAATTGGGTACTAACTGTAGCAAAAC
AACTTCAAACGGAGTTAGTT

Product: a protein from Bacteriophage phi-105 (ORF 45)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLIL
GTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD

Sequences:

>Translated_140_residues
MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLIL
GTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD
>Mature_140_residues
MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLIL
GTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD

Specific function: Unknown

COG id: COG4824

COG function: function code R; Phage-related holin (Lysis protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cp-1 holin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006480 [H]

Pfam domain/function: PF05105 Phage_holin_4 [H]

EC number: NA

Molecular weight: Translated: 15437; Mature: 15437

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHH
AKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILIFDAKSGEDEEKHDKDMD
HHHHCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHH
AKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILIFDAKSGEDEEKHDKDMD
HHHHCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]