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The map label for this gene is rsgA [H]

Identifier: 225861801

GI number: 225861801

Start: 1838673

End: 1839551

Strand: Reverse

Name: rsgA [H]

Synonym: SPT_1963

Alternate gene names: 225861801

Gene position: 1839551-1838673 (Counterclockwise)

Preceding gene: 225861802

Following gene: 225861800

Centisome position: 87.09

GC content: 44.48

Gene sequence:

>879_bases
ATGCAGGGACAAATCATTAAAGCCTTGGCAGGTTTCTACTATGTGGAGAGTGATGGCCAGGTTTATCAAACACGCGCGCG
TGGGAATTTCCGTAAAAAAGGCCATACCCCTTATGTTGGGGACTGGGTAGATTTCTCTGCCGAGGAAAATTCAGAAGGCT
ATATCCTCAAAATTCACGAACGGAAAAACAGTCTGGTTCGTCCGCCTATTGTCAATATCGATCAAGCTGTAGTAATCATG
TCCGTCAAGGAACCTGATTTTAACAGCAATTTGCTGGATCGTTTCTTGGTTCTTTTGGAGCACAAGGGCATCCATCCCAT
TGTCTATATTTCCAAAATGGATTTGTTGGAAGATAGGGGAGAACTGGATTTTTACCAGCAGACCTATGGTGACATCGGCT
ATGACTTTGTGACCAGTAAAGAGGAACTCCTGCCTTTGTTAACAGGCAAGGTTACGGTTTTTATGGGGCAGACAGGTGTT
GGGAAGTCAACTCTTCTCAACAAAATCGCACCAGATCTCAATCTTGAAACAGGAGAAATCTCAGACAGTCTGGGTCGTGG
GCGCCATACTACTCGAGCTGTTAGTTTTTACAATCTCAATGGGGGTAAAATCGCAGACACACCAGGCTTTTCATCTCTGG
ACTATGAAGTATCAAGGGCTGAAGACCTCAATCAGGCCTTTCCAGAGATTGCTACTGTCAGCCGAGATTGTAAGTTTCGT
ACTTGTACCCATACCCATGAGCCGTCTTGTGCCGTCAAGCCAGCTGTAGAAGAGGGGACCATTGCCACCTTCCGTTTTGA
CAACTACCTGCAATTCCTCAGCGAAATTGAAAATCGTAGAGAAACCTATAAAAAAGTCAGCAAAAAAATTCCAAAATAA

Upstream 100 bases:

>100_bases
TTGGACCAGGCAGGCTTGTCACCAAGTGTGCGTGGGGAAGCTCTCAGCTTGGCAGAATTTGCCGGTCTAGCAGACGCACT
TAAAGGGCAAGGACTCTAAG

Downstream 100 bases:

>100_bases
GGAGAAACCTATGTCTCAATACAAGATTGCTCCGTCAATTCTGGCAGCAGATTATGCCAACTTTGAACGTGAAATCAAAC
GTCTAGAAGCAACTGGGGCA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MQGQIIKALAGFYYVESDGQVYQTRARGNFRKKGHTPYVGDWVDFSAEENSEGYILKIHERKNSLVRPPIVNIDQAVVIM
SVKEPDFNSNLLDRFLVLLEHKGIHPIVYISKMDLLEDRGELDFYQQTYGDIGYDFVTSKEELLPLLTGKVTVFMGQTGV
GKSTLLNKIAPDLNLETGEISDSLGRGRHTTRAVSFYNLNGGKIADTPGFSSLDYEVSRAEDLNQAFPEIATVSRDCKFR
TCTHTHEPSCAVKPAVEEGTIATFRFDNYLQFLSEIENRRETYKKVSKKIPK

Sequences:

>Translated_292_residues
MQGQIIKALAGFYYVESDGQVYQTRARGNFRKKGHTPYVGDWVDFSAEENSEGYILKIHERKNSLVRPPIVNIDQAVVIM
SVKEPDFNSNLLDRFLVLLEHKGIHPIVYISKMDLLEDRGELDFYQQTYGDIGYDFVTSKEELLPLLTGKVTVFMGQTGV
GKSTLLNKIAPDLNLETGEISDSLGRGRHTTRAVSFYNLNGGKIADTPGFSSLDYEVSRAEDLNQAFPEIATVSRDCKFR
TCTHTHEPSCAVKPAVEEGTIATFRFDNYLQFLSEIENRRETYKKVSKKIPK
>Mature_292_residues
MQGQIIKALAGFYYVESDGQVYQTRARGNFRKKGHTPYVGDWVDFSAEENSEGYILKIHERKNSLVRPPIVNIDQAVVIM
SVKEPDFNSNLLDRFLVLLEHKGIHPIVYISKMDLLEDRGELDFYQQTYGDIGYDFVTSKEELLPLLTGKVTVFMGQTGV
GKSTLLNKIAPDLNLETGEISDSLGRGRHTTRAVSFYNLNGGKIADTPGFSSLDYEVSRAEDLNQAFPEIATVSRDCKFR
TCTHTHEPSCAVKPAVEEGTIATFRFDNYLQFLSEIENRRETYKKVSKKIPK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=311, Percent_Identity=36.6559485530547, Blast_Score=160, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33006; Mature: 33006

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQIIKALAGFYYVESDGQVYQTRARGNFRKKGHTPYVGDWVDFSAEENSEGYILKIHE
CCCHHHHHHHCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEC
RKNSLVRPPIVNIDQAVVIMSVKEPDFNSNLLDRFLVLLEHKGIHPIVYISKMDLLEDRG
CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCC
ELDFYQQTYGDIGYDFVTSKEELLPLLTGKVTVFMGQTGVGKSTLLNKIAPDLNLETGEI
CCHHHHHHHCCCCCHHHCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCC
SDSLGRGRHTTRAVSFYNLNGGKIADTPGFSSLDYEVSRAEDLNQAFPEIATVSRDCKFR
CHHHCCCCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
TCTHTHEPSCAVKPAVEEGTIATFRFDNYLQFLSEIENRRETYKKVSKKIPK
ECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQGQIIKALAGFYYVESDGQVYQTRARGNFRKKGHTPYVGDWVDFSAEENSEGYILKIHE
CCCHHHHHHHCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEC
RKNSLVRPPIVNIDQAVVIMSVKEPDFNSNLLDRFLVLLEHKGIHPIVYISKMDLLEDRG
CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCC
ELDFYQQTYGDIGYDFVTSKEELLPLLTGKVTVFMGQTGVGKSTLLNKIAPDLNLETGEI
CCHHHHHHHCCCCCHHHCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCC
SDSLGRGRHTTRAVSFYNLNGGKIADTPGFSSLDYEVSRAEDLNQAFPEIATVSRDCKFR
CHHHCCCCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
TCTHTHEPSCAVKPAVEEGTIATFRFDNYLQFLSEIENRRETYKKVSKKIPK
ECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]