| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
Click here to switch to the map view.
The map label for this gene is ytgP [H]
Identifier: 225861360
GI number: 225861360
Start: 1396207
End: 1397829
Strand: Reverse
Name: ytgP [H]
Synonym: SPT_1467
Alternate gene names: 225861360
Gene position: 1397829-1396207 (Counterclockwise)
Preceding gene: 225861362
Following gene: 225861359
Centisome position: 66.18
GC content: 44.18
Gene sequence:
>1623_bases ATGTCGCACGAAAACAATCACCAGCAGGCCCAGATGTTACGGGGGACTGCTTGGCTAACGGCTAGTAACTTTATCAGTCG CCTACTCGGGGCTGTTTACATTATCCCTTGGTACATCTGGATGGGGGCTTATGCAGCTAAGGCAAATGGTCTCTTTACCA TGGGTTACAATATCTATGCTTGGTTCTTGTTGGTTTCAACAGCGGGGATTCCAGTTGCGGTGGCCAAGCAAGTTGCCAAG TATAATACCATGCGAGAAGAAGAGCATAGCTTTGCCCTGATTCGGAGCTTCTTAGGCTTTATGACAGGACTAGGCCTGGT TTTTGCTTTAGTCTTGTATGTCTTTGCTCCTTGGCTAGCAGACTTGTCTGGCGTGGGCAAAGACTTGATCCCAATCATGC AAAGCTTGGCTTGGGGAGTCTTGATTTTCCCGTCTATGAGTGTTATCCGAGGATTTTTCCAAGGGATGAATAACCTCAAA CCTTATGCCATGAGCCAAATTGCTGAGCAGGTCATTCGTGTTATCTGGATGCTCCTAGCAACCTTTATCATTATGAAGCT CGGTTCAGGAGATTATCTAGCAGCCGTTACCCAATCAACCTTTGCTGCCTTTGTCGGTATGGTAGCCAGTTTTGCAGTCT TGATTTATTTCCTTGCCCAAGAAGGTTCACTCAAAAGAGTCTTTGAAACAGGAGATAAGATTAACAGTAAGCGTCTCTTG GTTGATACCATTAAGGAAGCCATTCCTTTTATCCTGACAGGGTCTGCCATCCAGCTCTTCCAGATTTTGGATCAGCTGAC CTTTATCAATAGTATGAGCTGGTTTACCAACTACAGCAATGAGGACTTGGTTGTCATGTTTTCTTATTTCTCAGCCAATC CTAATAAAATCACGATGATTTTGATTTCTGTAGGGGTTTCGATTGGGAGTGTTGGTTTGCCACTTTTGACGGAAAACTAT GTCAAGGGGGACTTGAAAGCGGCTTCTCGTCTCGTTCAGGACAGTCTCACCCTACTCTTTATGTTCTTGCTACCAGCAAC GGTTGGAGTGGTTATGGTAGGAGAACCTCTTTATACGGTCTTCTATGGTAAGCCAGATAGTTTGGCTCTGGGCTTATTTG TCTTTGCAGTTTTGCAGTCTATTATTTTAGGCTTGTACATGGTCTTGTCTCCAATGCTTCAGGTCATGTTCCGCAACCGC AAGGCCGTTCTCTATTTTATCTATGGTTCTATTGCCAAGCTAGTCTTGCAACTACCTACCATCGCCCTCTTCCACAGTTA TGGTCCTTTGATTTCAACAACCATTGCTCTCATCATTCCTAACGTCTTGATGTATCGGGATATTTGTAAAGTAACTGGTG TCAAGCGCAAGGTGATTTTGAAGCGAACCATTTTAATCAGTTTGCTGACCCTAGTCATGTTTCTGTTAATAGGAACCATC CAGTGGCTGTTAGGATTTTTCTTCCAACCAAGTGGACGTTTGTGGAGCTTCTTTTATGTAGCTCTTGTCGGTGCCATGGG GGGTGGACTTTATATGGTTATGAGTCTGCGTACCTATTTATTAGATAAGGTAATAGGAAAAGCCCAAGCAGATCGCCTGC GAGCAAAATTTAAGCTTTCGTAA
Upstream 100 bases:
>100_bases CTATTGTAAACCGAAAGTCGCAAATTTACAAGTAACAAGGAAAAGTTTATAATGGAAGATAAGGAGTTTTTCCTAGTTAT CAAAATTGAATGAGGAATCT
Downstream 100 bases:
>100_bases GGTAGCATTTATAAATAAAAGGAATAAGTTGAACAATCTTTTAGGAGAACTTGAAACTTATTCCTTTTTTAGCGTCAAAA TAGCTAAAATTATCTTTCAA
Product: polysaccharide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSHENNHQQAQMLRGTAWLTASNFISRLLGAVYIIPWYIWMGAYAAKANGLFTMGYNIYAWFLLVSTAGIPVAVAKQVAK YNTMREEEHSFALIRSFLGFMTGLGLVFALVLYVFAPWLADLSGVGKDLIPIMQSLAWGVLIFPSMSVIRGFFQGMNNLK PYAMSQIAEQVIRVIWMLLATFIIMKLGSGDYLAAVTQSTFAAFVGMVASFAVLIYFLAQEGSLKRVFETGDKINSKRLL VDTIKEAIPFILTGSAIQLFQILDQLTFINSMSWFTNYSNEDLVVMFSYFSANPNKITMILISVGVSIGSVGLPLLTENY VKGDLKAASRLVQDSLTLLFMFLLPATVGVVMVGEPLYTVFYGKPDSLALGLFVFAVLQSIILGLYMVLSPMLQVMFRNR KAVLYFIYGSIAKLVLQLPTIALFHSYGPLISTTIALIIPNVLMYRDICKVTGVKRKVILKRTILISLLTLVMFLLIGTI QWLLGFFFQPSGRLWSFFYVALVGAMGGGLYMVMSLRTYLLDKVIGKAQADRLRAKFKLS
Sequences:
>Translated_540_residues MSHENNHQQAQMLRGTAWLTASNFISRLLGAVYIIPWYIWMGAYAAKANGLFTMGYNIYAWFLLVSTAGIPVAVAKQVAK YNTMREEEHSFALIRSFLGFMTGLGLVFALVLYVFAPWLADLSGVGKDLIPIMQSLAWGVLIFPSMSVIRGFFQGMNNLK PYAMSQIAEQVIRVIWMLLATFIIMKLGSGDYLAAVTQSTFAAFVGMVASFAVLIYFLAQEGSLKRVFETGDKINSKRLL VDTIKEAIPFILTGSAIQLFQILDQLTFINSMSWFTNYSNEDLVVMFSYFSANPNKITMILISVGVSIGSVGLPLLTENY VKGDLKAASRLVQDSLTLLFMFLLPATVGVVMVGEPLYTVFYGKPDSLALGLFVFAVLQSIILGLYMVLSPMLQVMFRNR KAVLYFIYGSIAKLVLQLPTIALFHSYGPLISTTIALIIPNVLMYRDICKVTGVKRKVILKRTILISLLTLVMFLLIGTI QWLLGFFFQPSGRLWSFFYVALVGAMGGGLYMVMSLRTYLLDKVIGKAQADRLRAKFKLS >Mature_539_residues SHENNHQQAQMLRGTAWLTASNFISRLLGAVYIIPWYIWMGAYAAKANGLFTMGYNIYAWFLLVSTAGIPVAVAKQVAKY NTMREEEHSFALIRSFLGFMTGLGLVFALVLYVFAPWLADLSGVGKDLIPIMQSLAWGVLIFPSMSVIRGFFQGMNNLKP YAMSQIAEQVIRVIWMLLATFIIMKLGSGDYLAAVTQSTFAAFVGMVASFAVLIYFLAQEGSLKRVFETGDKINSKRLLV DTIKEAIPFILTGSAIQLFQILDQLTFINSMSWFTNYSNEDLVVMFSYFSANPNKITMILISVGVSIGSVGLPLLTENYV KGDLKAASRLVQDSLTLLFMFLLPATVGVVMVGEPLYTVFYGKPDSLALGLFVFAVLQSIILGLYMVLSPMLQVMFRNRK AVLYFIYGSIAKLVLQLPTIALFHSYGPLISTTIALIIPNVLMYRDICKVTGVKRKVILKRTILISLLTLVMFLLIGTIQ WLLGFFFQPSGRLWSFFYVALVGAMGGGLYMVMSLRTYLLDKVIGKAQADRLRAKFKLS
Specific function: May play a role in cell division, although it is not essential for growth [H]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 60132; Mature: 60001
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHENNHQQAQMLRGTAWLTASNFISRLLGAVYIIPWYIWMGAYAAKANGLFTMGYNIYA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHH WFLLVSTAGIPVAVAKQVAKYNTMREEEHSFALIRSFLGFMTGLGLVFALVLYVFAPWLA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLSGVGKDLIPIMQSLAWGVLIFPSMSVIRGFFQGMNNLKPYAMSQIAEQVIRVIWMLLA HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH TFIIMKLGSGDYLAAVTQSTFAAFVGMVASFAVLIYFLAQEGSLKRVFETGDKINSKRLL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHH VDTIKEAIPFILTGSAIQLFQILDQLTFINSMSWFTNYSNEDLVVMFSYFSANPNKITMI HHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE LISVGVSIGSVGLPLLTENYVKGDLKAASRLVQDSLTLLFMFLLPATVGVVMVGEPLYTV EEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEE FYGKPDSLALGLFVFAVLQSIILGLYMVLSPMLQVMFRNRKAVLYFIYGSIAKLVLQLPT EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH IALFHSYGPLISTTIALIIPNVLMYRDICKVTGVKRKVILKRTILISLLTLVMFLLIGTI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QWLLGFFFQPSGRLWSFFYVALVGAMGGGLYMVMSLRTYLLDKVIGKAQADRLRAKFKLS HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHENNHQQAQMLRGTAWLTASNFISRLLGAVYIIPWYIWMGAYAAKANGLFTMGYNIYA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHH WFLLVSTAGIPVAVAKQVAKYNTMREEEHSFALIRSFLGFMTGLGLVFALVLYVFAPWLA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLSGVGKDLIPIMQSLAWGVLIFPSMSVIRGFFQGMNNLKPYAMSQIAEQVIRVIWMLLA HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH TFIIMKLGSGDYLAAVTQSTFAAFVGMVASFAVLIYFLAQEGSLKRVFETGDKINSKRLL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHH VDTIKEAIPFILTGSAIQLFQILDQLTFINSMSWFTNYSNEDLVVMFSYFSANPNKITMI HHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE LISVGVSIGSVGLPLLTENYVKGDLKAASRLVQDSLTLLFMFLLPATVGVVMVGEPLYTV EEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEE FYGKPDSLALGLFVFAVLQSIILGLYMVLSPMLQVMFRNRKAVLYFIYGSIAKLVLQLPT EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH IALFHSYGPLISTTIALIIPNVLMYRDICKVTGVKRKVILKRTILISLLTLVMFLLIGTI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QWLLGFFFQPSGRLWSFFYVALVGAMGGGLYMVMSLRTYLLDKVIGKAQADRLRAKFKLS HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]