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The map label for this gene is yueF [H]

Identifier: 225861234

GI number: 225861234

Start: 1269314

End: 1270345

Strand: Reverse

Name: yueF [H]

Synonym: SPT_1328

Alternate gene names: 225861234

Gene position: 1270345-1269314 (Counterclockwise)

Preceding gene: 225861236

Following gene: 225861233

Centisome position: 60.14

GC content: 33.43

Gene sequence:

>1032_bases
ATGGGATCTTTGATTAACCCTTTTGTTAGCGTGCTTAATACAATTATGATTCCATTTTTATTAGGGGGCTTTCTTTATTA
TTTGACAAACCCTATTGTTACTTTCTTAAATAAAGTCTGTAAACTCAATCGTTTGCTTGGTATTTTAATTACCTTGTGTA
CTTTGGTCTGGGGAATGGTCATAGGTGTTGTCTATCTCTTACCTATTTTGATTAATCAGTTATCTAGTTTGATTATATCT
AGTCAAACTATTTATAGTCGAGTACAAGACTTAATCATAGACTTATCTAATTATCCTGCGCTCCAGAATTTGGATGTAGA
AGCTACAATTCAGCAGTTAAACTTATCCTATGTTGATATTCTTCAAAATATCCTAAATAGCGTATCAAATAGTGTGGGGA
GCGTCTTGTCAGCTCTTATCAGTACTGTTTTGATTTTGATTATGACTCCAGTTTTTTTGGTTTATTTCTTATTAGATGGA
CATAAATTCTTGCCCATGCTTGAAAGAACGATTCTAAAGAGGGATCGCTTGCATATTGCAGGCTTATTAAAGAATTTAAA
TGCGACGATTGCTCGCTATATTAGTGGAGTTTCGATTGACGCAATCATTATAGGTTGTTTAGCTTATATTGGCTATAGTA
TTATTGGTTTAAAATATGCTTTAGTTTTTGCCATTTTTTCTGGTGTAGCCAATTTAATTCCTTATGTGGGGCCAAGTATT
GGTTTGATTCCTATGATCATCGCAAATATATTCACTGATCCCCATAGACTGCTGATTGCAGTGATTTATATGCTTGTTGT
TCAGCAGGTAGATGGCAATATCTTATATCCTCGAATCGTAGGAAGTGTTATGAAGGTTCATCCAATCACGATTTTAGTTT
TACTTTTGTTGTCAAGCAATATCTATGGTGTAGTTGGAATGATTGTCGCAGTGCCAACCTATTCTATCTTGAAAGAAATT
TCTAAGTTCTTATCCCGTTTGTATGAAAATCATAAAATAATGAAAGAACGAGAAAGAGAATTAGCTAAGTAA

Upstream 100 bases:

>100_bases
AATAAAGTGAGGGAGGTAACTCATGTTTCGTAGAAATAAATTATTTTTTTGGACCACAGAAATTTTACTCTTAACCATCA
TCTTTTACCTATGGAGACAG

Downstream 100 bases:

>100_bases
AAGTCAGGAGAACCCTGATTTTTCTTTACTGGAAGTGGCCTTTAGATTAGAAGACTGAAAATAAGTTAAAGTCTTAAACT
AATTTTCACAGCTAAGAATA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MGSLINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLSSLIIS
SQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDG
HKFLPMLERTILKRDRLHIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSI
GLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIVAVPTYSILKEI
SKFLSRLYENHKIMKERERELAK

Sequences:

>Translated_343_residues
MGSLINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLSSLIIS
SQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDG
HKFLPMLERTILKRDRLHIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSI
GLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIVAVPTYSILKEI
SKFLSRLYENHKIMKERERELAK
>Mature_342_residues
GSLINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLSSLIISS
QTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGH
KFLPMLERTILKRDRLHIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIG
LIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIVAVPTYSILKEIS
KFLSRLYENHKIMKERERELAK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=300, Percent_Identity=24.3333333333333, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082271, Length=319, Percent_Identity=25.0783699059561, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787885, Length=311, Percent_Identity=25.4019292604502, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38048; Mature: 37916

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVVYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHH
LQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHCC
IYGVVGMIVAVPTYSILKEISKFLSRLYENHKIMKERERELAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSLINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVVYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHH
LQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHCC
IYGVVGMIVAVPTYSILKEISKFLSRLYENHKIMKERERELAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]