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The map label for this gene is rsmI [H]

Identifier: 225861169

GI number: 225861169

Start: 1199790

End: 1200668

Strand: Reverse

Name: rsmI [H]

Synonym: SPT_1262

Alternate gene names: 225861169

Gene position: 1200668-1199790 (Counterclockwise)

Preceding gene: 225861170

Following gene: 225861168

Centisome position: 56.85

GC content: 43.12

Gene sequence:

>879_bases
ATGCAAATTCAAAAAAGTTTTAAGGGGCAGTCTCCCTATGGCAAGCTGTATCTAGTGGCAACGCCGATTGGCAATCTAGA
TGATATGACTTTTCGTGCTATCCAGACCTTGAAAGAAGTGGACTGGATTGCTGCTGAGGATACGCGCAATACAGGGCTTT
TGCTCAAGCATTTTGACATTTCCACCAAGCAGATCAGTTTTCATGAGCACAATGCCAAGGAAAAAATTCCTGATTTGATT
GGTTTCTTGAAAGCAGGGCAAAGTATTGCTCAGGTCTCTGATGCCGGTTTGCCTAGCATTTCAGACCCTGGTCATGATTT
GGTTAAGGCAGCTATTGAGGAAGAAATTGCAGTTGTTACAGTTCCAGGTGCCTCTGCAGGAATTTCCGCCTTGATTGCCA
GTGGTTTAGCGCCGCAGCCACATATCTTTTACGGCTTTTTACCGAGAAAATCAGGCCAGCAAAAGCAATTTTTCGACTCG
AAAAAAGACTATCCTGAAACTCAGATTTTTTATGAATCGCCCCATCGTGTGGCAGATACATTGGAAAATATGCTAGAAGT
CTACGGTGACCGCTCGGTAGTCTTGGTCAGGGAATTGACTAAAATCTATGAAGAATACCAAAGAGGTACCATTTCTGAAT
TGCTGGAAAGCATCTCTGAAACGTCTCTCAAGGGTGAATGCCTTCTTATTGTTGAAGGTGCCAGTCAGGATGTGGAGGAA
AAAGACGAGGAGGACTTGTTCTTAGAAATCCAAGCCCGCATCCAACATGGTATGAAGAAAAATCAAGCCATTAAGGAAGT
TGCGAAATACTACCAGTGGAATAAAAGTCAGCTTTATGCTGCCTACCACGAATGGGAAGAAAATCAAGAAAATGACTAA

Upstream 100 bases:

>100_bases
ACCGTGATGGATTTCACGTATGTAATGATTTTTATGGACAACGTCGAGAGCAGGACGAAGAATGTATGTTCTGTGATGAG
TTGTTATACAGGGAGTAAGC

Downstream 100 bases:

>100_bases
ACAGGGAAGTTTGCCTTCTTCCCTTTTTTTGTTATACTAGTAGAAGAAAAAAATAGAAAGATTTGTGGGAGTGAAAAAGT
CCTGTGGACTTTTTCAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLI
GFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDS
KKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASQDVEE
KDEEDLFLEIQARIQHGMKKNQAIKEVAKYYQWNKSQLYAAYHEWEENQEND

Sequences:

>Translated_292_residues
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLI
GFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDS
KKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASQDVEE
KDEEDLFLEIQARIQHGMKKNQAIKEVAKYYQWNKSQLYAAYHEWEENQEND
>Mature_292_residues
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLI
GFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDS
KKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASQDVEE
KDEEDLFLEIQARIQHGMKKNQAIKEVAKYYQWNKSQLYAAYHEWEENQEND

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=236, Percent_Identity=47.8813559322034, Blast_Score=204, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32928; Mature: 32928

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
CCCEEECHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEE
VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDSKKDYPETQIFYESPHRVADT
ECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHH
LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASQDVEE
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
KDEEDLFLEIQARIQHGMKKNQAIKEVAKYYQWNKSQLYAAYHEWEENQEND
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
CCCEEECHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEE
VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDSKKDYPETQIFYESPHRVADT
ECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHH
LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASQDVEE
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
KDEEDLFLEIQARIQHGMKKNQAIKEVAKYYQWNKSQLYAAYHEWEENQEND
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]