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The map label for this gene is 225861170

Identifier: 225861170

GI number: 225861170

Start: 1200671

End: 1200988

Strand: Reverse

Name: 225861170

Synonym: SPT_1263

Alternate gene names: NA

Gene position: 1200988-1200671 (Counterclockwise)

Preceding gene: 225861171

Following gene: 225861169

Centisome position: 56.86

GC content: 42.77

Gene sequence:

>318_bases
ATGGACAAAAAAGAATTATTTGACGCGCTGGATGATTTTTCCCAACAATTATTGGTAACCTTAGCCGATGTGGAAGCCAT
CAAGAAAAATCTCAAGAGCTTGGTAGAAGAAAATACAGCTCTTCGCTTGGAAAATAGTAAGTTGCGAGAACGCTTGGGTG
AGGTGGAAGCAGACGCTCCCGTCAAGGCCAAGCATGTTCGCGAAAGTGTCCGTCGTATTTACCGTGATGGATTTCACGTA
TGTAATGATTTTTATGGACAACGTCGAGAGCAGGACGAAGAATGTATGTTCTGTGATGAGTTGTTATACAGGGAGTAA

Upstream 100 bases:

>100_bases
GTGGCAAGCTAATGTCAGCTTTCAAAATGCCATGGAATATCTGGTCTTGAAAGAAATATAAACTCAAAAATGAATGATAA
AGAAAGGAAAGGGCTGTTTT

Downstream 100 bases:

>100_bases
GCATGCAAATTCAAAAAAGTTTTAAGGGGCAGTCTCCCTATGGCAAGCTGTATCTAGTGGCAACGCCGATTGGCAATCTA
GATGATATGACTTTTCGTGC

Product: DNA replication intiation control protein YabA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHV
CNDFYGQRREQDEECMFCDELLYRE

Sequences:

>Translated_105_residues
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHV
CNDFYGQRREQDEECMFCDELLYRE
>Mature_105_residues
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHV
CNDFYGQRREQDEECMFCDELLYRE

Specific function: Involved in initiation control of chromosome replication

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YABA_STRP2 (Q04KY8)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816310.1
- STRING:   Q04KY8
- EnsemblBacteria:   EBSTRT00000019814
- GeneID:   4442815
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_0827
- eggNOG:   COG4467
- GeneTree:   EBGT00050000028195
- HOGENOM:   HBG514867
- OMA:   VHYGSVR
- ProtClustDB:   PRK13169
- HAMAP:   MF_01159
- InterPro:   IPR010377
- PIRSF:   PIRSF021439

Pfam domain/function: PF06156 DUF972

EC number: NA

Molecular weight: Translated: 12411; Mature: 12411

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VKAKHVRESVRRIYRDGFHVCNDFYGQRREQDEECMFCDELLYRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VKAKHVRESVRRIYRDGFHVCNDFYGQRREQDEECMFCDELLYRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA