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The map label for this gene is tnpA [H]

Identifier: 225860483

GI number: 225860483

Start: 460005

End: 461267

Strand: Reverse

Name: tnpA [H]

Synonym: SPT_0499

Alternate gene names: 225860483

Gene position: 461267-460005 (Counterclockwise)

Preceding gene: 225860484

Following gene: 225860481

Centisome position: 21.84

GC content: 37.93

Gene sequence:

>1263_bases
ATGGAACACATCAATCATACCACATTACTCATCGGAATAAAAGACAAAAACATCACCTTAAATAAAGCCATTCAGCACGA
TACCCATATCGAAGTCTTCGCTACACTTGATTATCACCCACCTAAATGTAAACACTGTAAAGGAAAACAAATCAAATACG
ACTTCCAAAAGCCTTCTAAAATCCCTTTTATCGAGATTGGTGGTTTCCCTAGCCTCATTCATTTGAAAAAGAGACGATTT
CAATGCAAGTCCTGTCGGAAAGTCACTGTAGCTGAAACAACTCTCGTTCAGAAAAATTGCCAAATCTCGGAAATGGTGAG
ACAGAAAATTGCCCAACTCCTACTCAACAGAGAGGCTCTTACACATATCGCTTCTAAATTAGCCATCTCTACCTCTACCT
CTACCGTCTATCGTAAGCTCAAGCAATTTCATTTCCAAGAGGATTACACCACTTTGCCTGAAATCCTCTCCTGGGATGAA
TTCTCCTACCAGAAGGGGAAATTGGCTTTCATTGCTCAGGATTTCAACACTAAGAAAATCATGACCATTCTTGATAACAG
ACGTCAAACAACCATCCGAAATCATTTCTTCAAGTACTCGAAAGAAGCTAGAAAAAAAGTTAAAGTCGTCACTGTTGATA
TGTCTGGAAGTTATATCCCTCTCATTAAGAAATTATTTCCCAATGCTAAAATTGTTCTCGATCGTTTCCACATTGTCCAA
CACATGAGCAGGGCTCTTAATCAGACTAGAATCAACATCATGAAGCAATTTGATGATAAATCTCTGGAATACAGAGCTCT
TAAATATTACTGGAAATTTATCCTAAAAGATAGTCGGAAACTCTCTCTTAAGCCTTTCTATGCTAGAACTTTCAGAGAGA
CCTTAACTCCTAGGGAGTGTCTGAAGAAAATCTTTACTCTAGTACCTGAACTTAAAGATTACTATGACCTGTATCAACTA
CTCCTATTTCATCTACAAGAGAAGAATACTGACCAGTTTTGGGGCTTAATTCAAGACACGTTACCTCATCTCAACCGCAC
CTTTAAAACCACTTTGAGCACATTTATTCGCTATAAAAACTACATCACTAACGCCATTGAATTGCCTTATTCTAACGCTA
AACTTGAGGCCACTAACAAACTCATCAAAGACATCAAGCGCAATGCCTTTGGTTTTCGGAACTTTGAAAACTTCAAAAAA
CGGATTTTCATCGCTCTGAACATCAAAAAAGAAAGGACAAAATTTGTCCTTTCTCGAGCTTAG

Upstream 100 bases:

>100_bases
GTAAATCCCACTGTGGAGATTATAGGGCTTTTTGAGTATCAAAAAAGTCCCATAAGATTTATAATGAAAAGCGCCTAAAC
AACTCATTAGAAAGTATCTT

Downstream 100 bases:

>100_bases
CTTTTCTTCAACCCACTACAGTTGACAAAGAGCCCTTTTTATTATTCAAGAACTTGATTAGCTCAATGCATCCAAGGCGT
CATCCATTGAAAGAACTTCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MEHINHTTLLIGIKDKNITLNKAIQHDTHIEVFATLDYHPPKCKHCKGKQIKYDFQKPSKIPFIEIGGFPSLIHLKKRRF
QCKSCRKVTVAETTLVQKNCQISEMVRQKIAQLLLNREALTHIASKLAISTSTSTVYRKLKQFHFQEDYTTLPEILSWDE
FSYQKGKLAFIAQDFNTKKIMTILDNRRQTTIRNHFFKYSKEARKKVKVVTVDMSGSYIPLIKKLFPNAKIVLDRFHIVQ
HMSRALNQTRINIMKQFDDKSLEYRALKYYWKFILKDSRKLSLKPFYARTFRETLTPRECLKKIFTLVPELKDYYDLYQL
LLFHLQEKNTDQFWGLIQDTLPHLNRTFKTTLSTFIRYKNYITNAIELPYSNAKLEATNKLIKDIKRNAFGFRNFENFKK
RIFIALNIKKERTKFVLSRA

Sequences:

>Translated_420_residues
MEHINHTTLLIGIKDKNITLNKAIQHDTHIEVFATLDYHPPKCKHCKGKQIKYDFQKPSKIPFIEIGGFPSLIHLKKRRF
QCKSCRKVTVAETTLVQKNCQISEMVRQKIAQLLLNREALTHIASKLAISTSTSTVYRKLKQFHFQEDYTTLPEILSWDE
FSYQKGKLAFIAQDFNTKKIMTILDNRRQTTIRNHFFKYSKEARKKVKVVTVDMSGSYIPLIKKLFPNAKIVLDRFHIVQ
HMSRALNQTRINIMKQFDDKSLEYRALKYYWKFILKDSRKLSLKPFYARTFRETLTPRECLKKIFTLVPELKDYYDLYQL
LLFHLQEKNTDQFWGLIQDTLPHLNRTFKTTLSTFIRYKNYITNAIELPYSNAKLEATNKLIKDIKRNAFGFRNFENFKK
RIFIALNIKKERTKFVLSRA
>Mature_420_residues
MEHINHTTLLIGIKDKNITLNKAIQHDTHIEVFATLDYHPPKCKHCKGKQIKYDFQKPSKIPFIEIGGFPSLIHLKKRRF
QCKSCRKVTVAETTLVQKNCQISEMVRQKIAQLLLNREALTHIASKLAISTSTSTVYRKLKQFHFQEDYTTLPEILSWDE
FSYQKGKLAFIAQDFNTKKIMTILDNRRQTTIRNHFFKYSKEARKKVKVVTVDMSGSYIPLIKKLFPNAKIVLDRFHIVQ
HMSRALNQTRINIMKQFDDKSLEYRALKYYWKFILKDSRKLSLKPFYARTFRETLTPRECLKKIFTLVPELKDYYDLYQL
LLFHLQEKNTDQFWGLIQDTLPHLNRTFKTTLSTFIRYKNYITNAIELPYSNAKLEATNKLIKDIKRNAFGFRNFENFKK
RIFIALNIKKERTKFVLSRA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 49899; Mature: 49899

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHINHTTLLIGIKDKNITLNKAIQHDTHIEVFATLDYHPPKCKHCKGKQIKYDFQKPSK
CCCCCCEEEEEEEECCCEEHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCC
IPFIEIGGFPSLIHLKKRRFQCKSCRKVTVAETTLVQKNCQISEMVRQKIAQLLLNREAL
CCEEEECCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
THIASKLAISTSTSTVYRKLKQFHFQEDYTTLPEILSWDEFSYQKGKLAFIAQDFNTKKI
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH
MTILDNRRQTTIRNHFFKYSKEARKKVKVVTVDMSGSYIPLIKKLFPNAKIVLDRFHIVQ
HHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHH
HMSRALNQTRINIMKQFDDKSLEYRALKYYWKFILKDSRKLSLKPFYARTFRETLTPREC
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH
LKKIFTLVPELKDYYDLYQLLLFHLQEKNTDQFWGLIQDTLPHLNRTFKTTLSTFIRYKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YITNAIELPYSNAKLEATNKLIKDIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MEHINHTTLLIGIKDKNITLNKAIQHDTHIEVFATLDYHPPKCKHCKGKQIKYDFQKPSK
CCCCCCEEEEEEEECCCEEHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCC
IPFIEIGGFPSLIHLKKRRFQCKSCRKVTVAETTLVQKNCQISEMVRQKIAQLLLNREAL
CCEEEECCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
THIASKLAISTSTSTVYRKLKQFHFQEDYTTLPEILSWDEFSYQKGKLAFIAQDFNTKKI
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH
MTILDNRRQTTIRNHFFKYSKEARKKVKVVTVDMSGSYIPLIKKLFPNAKIVLDRFHIVQ
HHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHH
HMSRALNQTRINIMKQFDDKSLEYRALKYYWKFILKDSRKLSLKPFYARTFRETLTPREC
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH
LKKIFTLVPELKDYYDLYQLLLFHLQEKNTDQFWGLIQDTLPHLNRTFKTTLSTFIRYKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YITNAIELPYSNAKLEATNKLIKDIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]