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The map label for this gene is 225860484

Identifier: 225860484

GI number: 225860484

Start: 461532

End: 463061

Strand: Reverse

Name: 225860484

Synonym: SPT_0500

Alternate gene names: NA

Gene position: 463061-461532 (Counterclockwise)

Preceding gene: 225860487

Following gene: 225860483

Centisome position: 21.92

GC content: 34.84

Gene sequence:

>1530_bases
ATGCTAAACAAATACATTGAAAAAAGAATTACAGATAAAATTACCATTTTAAATATATTATTGGATATTCGGTCTATTGA
ACTAGATGAACTGTCTACTTTAACTTCATTACAATCTAAAAGTCTCCTAAGCATTTTGCAGGAATTACAAGAAACATTCG
AGGAAGAGTTGACATTTAATTTAGATACGCAACAAGTTCAATTAATCGAACACCATTCTCATCAAACGAATTATTACTTC
CATCAGCTTTATAACCAATCAACTATTTTAAAAATACTCCGCTTCTTTCTACTACAAGGTAATCAAAGCTTTAACGAATT
TACACAAAAAGAGTATATTTCCATCGCAACAGGCTACCGCGTACGACAAAAGTGTGGCTTGTTACTACGTTCAGTAGGTT
TGGACCTTGTGAAAAATCAAGTAGTTGGTCCTGAATATCGCATTCGTTTTTTAATTGCACTCCTCCAGTTTCATTTTGGT
ATTGAGATTTATGATTTGAATGATGGAAGTATGGATTGGGTCACACATATGATTGTGCAGTCTAATTCTCAACTCAGTCA
TGAACTGTTAGAAATCACACCTGACGAGTATGTTCATTTTAGCATACTAGTGGCACTCACTTGGAAACGTCGGGAATTTC
CACTTGAGTTCCCTGAGTCCAAAGAGTTTGAAAAATTAAAAAACCTCTTTATGTATCCGATTTTGATGGAACATTGCCAA
ACTTACTTAGAGCCACATGCCAACATGACTTTTACTCAGGAAGAACTGGATTATATCTTTTTGGTTTATTGTTCTGCTAA
TTCTTCGTTTTCCAAGGACAAATGGAATCAAGAAAAAAAGACTCATACTATTCAACTGATTCTTCAGCATACAAGAGGAA
AGCATCTACTATCCAAGTTCAAGAATATCTTAGGAAATGACATTTCGAATTCTCTTTCTTTTTTAACAGCACTGACTTTC
TTAACAAGAACGTTTTTGTTTGGTTTACAAAATCTAGTTCCCTATTATAATTATTACGAACATTATGGGATTGAAAGCGA
CAAGCCACTGTATCATATTTCGAAAGCAATTGTTCAAGAGTGGATGACTGAGCAGAAGATTGAAGGAGTTATCGACCAGC
ATCGGCTGTACCTTTTCTCACTCTACTTGACAGAAACCATCTTTTCCTCACTACCTGCTATCCCGATTTTTATCATTTTA
AATAATCAAGCAGATGTAAACTTAATAAAGTCCATTATTTTACGGAATTTTACTGACAAAGTTGCCTCTGTTACAGGATA
CAATATTCTAATTAGTCCTCCTCCTTCAGAGGAGCATTTGACAGAGCCATTGATTATTATTACAACGAAAGAATACCTGC
CTTACGTTAAAAAGCAGTATCCCAAAGGGAAACATCACTTTTTGACGATTGCCTTAGATTTGCATGTTAGCCAACAGCGT
CTCATCTATCAGACAATTGTAGATATCCGAAAAGAGGCTTTTGACAAACGGGTCGCAATGATTGCTAAAAAGGCTCACTA
TTTGTTATAA

Upstream 100 bases:

>100_bases
CAATAAAGTCGGAAATTCCACAACCTTTTTGACAAGACAATTAGTTTCTTTTGTATTATAATAATTAAAATTATCTATAT
GCAACTAAGATTCGGTAACT

Downstream 100 bases:

>100_bases
GTTCATCGTACTGTCTACACACAAAAAGGGGCTTCCTAAGCCATCTCTATTCTTATCCCCATATTTCCCAGTTTTGGGTA
AATCTGAACAGAAAAACACT

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: Regulatory Protein-RofA ; RofA Family Transcriptional Regulator; RofA Regulatory Protein; RofA/Nra-Like Transcriptional Regulator; Regulatory Protein RofA ; Transcriptional Regulator RofA Familiy; Regulatory Protein

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MLNKYIEKRITDKITILNILLDIRSIELDELSTLTSLQSKSLLSILQELQETFEEELTFNLDTQQVQLIEHHSHQTNYYF
HQLYNQSTILKILRFFLLQGNQSFNEFTQKEYISIATGYRVRQKCGLLLRSVGLDLVKNQVVGPEYRIRFLIALLQFHFG
IEIYDLNDGSMDWVTHMIVQSNSQLSHELLEITPDEYVHFSILVALTWKRREFPLEFPESKEFEKLKNLFMYPILMEHCQ
TYLEPHANMTFTQEELDYIFLVYCSANSSFSKDKWNQEKKTHTIQLILQHTRGKHLLSKFKNILGNDISNSLSFLTALTF
LTRTFLFGLQNLVPYYNYYEHYGIESDKPLYHISKAIVQEWMTEQKIEGVIDQHRLYLFSLYLTETIFSSLPAIPIFIIL
NNQADVNLIKSIILRNFTDKVASVTGYNILISPPPSEEHLTEPLIIITTKEYLPYVKKQYPKGKHHFLTIALDLHVSQQR
LIYQTIVDIRKEAFDKRVAMIAKKAHYLL

Sequences:

>Translated_509_residues
MLNKYIEKRITDKITILNILLDIRSIELDELSTLTSLQSKSLLSILQELQETFEEELTFNLDTQQVQLIEHHSHQTNYYF
HQLYNQSTILKILRFFLLQGNQSFNEFTQKEYISIATGYRVRQKCGLLLRSVGLDLVKNQVVGPEYRIRFLIALLQFHFG
IEIYDLNDGSMDWVTHMIVQSNSQLSHELLEITPDEYVHFSILVALTWKRREFPLEFPESKEFEKLKNLFMYPILMEHCQ
TYLEPHANMTFTQEELDYIFLVYCSANSSFSKDKWNQEKKTHTIQLILQHTRGKHLLSKFKNILGNDISNSLSFLTALTF
LTRTFLFGLQNLVPYYNYYEHYGIESDKPLYHISKAIVQEWMTEQKIEGVIDQHRLYLFSLYLTETIFSSLPAIPIFIIL
NNQADVNLIKSIILRNFTDKVASVTGYNILISPPPSEEHLTEPLIIITTKEYLPYVKKQYPKGKHHFLTIALDLHVSQQR
LIYQTIVDIRKEAFDKRVAMIAKKAHYLL
>Mature_509_residues
MLNKYIEKRITDKITILNILLDIRSIELDELSTLTSLQSKSLLSILQELQETFEEELTFNLDTQQVQLIEHHSHQTNYYF
HQLYNQSTILKILRFFLLQGNQSFNEFTQKEYISIATGYRVRQKCGLLLRSVGLDLVKNQVVGPEYRIRFLIALLQFHFG
IEIYDLNDGSMDWVTHMIVQSNSQLSHELLEITPDEYVHFSILVALTWKRREFPLEFPESKEFEKLKNLFMYPILMEHCQ
TYLEPHANMTFTQEELDYIFLVYCSANSSFSKDKWNQEKKTHTIQLILQHTRGKHLLSKFKNILGNDISNSLSFLTALTF
LTRTFLFGLQNLVPYYNYYEHYGIESDKPLYHISKAIVQEWMTEQKIEGVIDQHRLYLFSLYLTETIFSSLPAIPIFIIL
NNQADVNLIKSIILRNFTDKVASVTGYNILISPPPSEEHLTEPLIIITTKEYLPYVKKQYPKGKHHFLTIALDLHVSQQR
LIYQTIVDIRKEAFDKRVAMIAKKAHYLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59914; Mature: 59914

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKYIEKRITDKITILNILLDIRSIELDELSTLTSLQSKSLLSILQELQETFEEELTFN
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC
LDTQQVQLIEHHSHQTNYYFHQLYNQSTILKILRFFLLQGNQSFNEFTQKEYISIATGYR
CCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
VRQKCGLLLRSVGLDLVKNQVVGPEYRIRFLIALLQFHFGIEIYDLNDGSMDWVTHMIVQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH
SNSQLSHELLEITPDEYVHFSILVALTWKRREFPLEFPESKEFEKLKNLFMYPILMEHCQ
CCCHHHHHHHHCCCCHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TYLEPHANMTFTQEELDYIFLVYCSANSSFSKDKWNQEKKTHTIQLILQHTRGKHLLSKF
HHHCCCCCCEEEHHCCCEEEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHH
KNILGNDISNSLSFLTALTFLTRTFLFGLQNLVPYYNYYEHYGIESDKPLYHISKAIVQE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
WMTEQKIEGVIDQHRLYLFSLYLTETIFSSLPAIPIFIILNNQADVNLIKSIILRNFTDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
VASVTGYNILISPPPSEEHLTEPLIIITTKEYLPYVKKQYPKGKHHFLTIALDLHVSQQR
HHHHCCCEEEECCCCCHHHCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEEECCHHH
LIYQTIVDIRKEAFDKRVAMIAKKAHYLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNKYIEKRITDKITILNILLDIRSIELDELSTLTSLQSKSLLSILQELQETFEEELTFN
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC
LDTQQVQLIEHHSHQTNYYFHQLYNQSTILKILRFFLLQGNQSFNEFTQKEYISIATGYR
CCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
VRQKCGLLLRSVGLDLVKNQVVGPEYRIRFLIALLQFHFGIEIYDLNDGSMDWVTHMIVQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH
SNSQLSHELLEITPDEYVHFSILVALTWKRREFPLEFPESKEFEKLKNLFMYPILMEHCQ
CCCHHHHHHHHCCCCHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TYLEPHANMTFTQEELDYIFLVYCSANSSFSKDKWNQEKKTHTIQLILQHTRGKHLLSKF
HHHCCCCCCEEEHHCCCEEEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHH
KNILGNDISNSLSFLTALTFLTRTFLFGLQNLVPYYNYYEHYGIESDKPLYHISKAIVQE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
WMTEQKIEGVIDQHRLYLFSLYLTETIFSSLPAIPIFIILNNQADVNLIKSIILRNFTDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
VASVTGYNILISPPPSEEHLTEPLIIITTKEYLPYVKKQYPKGKHHFLTIALDLHVSQQR
HHHHCCCEEEECCCCCHHHCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEEECCHHH
LIYQTIVDIRKEAFDKRVAMIAKKAHYLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA