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The map label for this gene is yvoA [H]

Identifier: 225686920

GI number: 225686920

Start: 1158824

End: 1159558

Strand: Reverse

Name: yvoA [H]

Synonym: BMEA_B1174

Alternate gene names: 225686920

Gene position: 1159558-1158824 (Counterclockwise)

Preceding gene: 225686921

Following gene: 225686919

Centisome position: 97.81

GC content: 54.01

Gene sequence:

>735_bases
ATGAATGTTGAATCGGATCATGCGCCCCTCTATGCCAAGGTCGAGGCTGCTTTGGCAGCCGAGATTGCCAAAGGCATCTT
TCCTCGTGGTTCCCGGCTCCCGCCTGAAGATAGCTTGATCGAGAGGTTCGGTGTCAGCCGGACCACCGTTCGCAAGGCCA
TTGAAAATCTGGTCATGCGTGGCCTGGTCGAGATCCGACGCGGCAAAGGAACCTTCGTTGCGGAGCCAAAGATTCGGCAG
GAATTGACTGAATTGAGCGGCTTCGTGGAAGATATGGTTGCCTTGGGTCGCAAGCCAACCGCAAATCTGCTCGACAAGCG
ATCGGTTCCCGCTTGTGAGGAAGTGGCAGAGCATCTTGGCGTTGCTGTTGGAACGCAGGTCTATCGCATCGAGCGTGTGC
GATTGGCCGATGGCGTCGCCATGTCGTTCGACGAAACCTATTTGCCCCTCGATATCGGCGAGAAGATTGCCAGCAACGAT
TTGGAAGTTGAACCGATCTTTTCATTGCTTGAAAACAAGTATGGCATGCCACTTGTCGAAGCAGACTACCAGCTGGAGGC
TGTTACGGCTGACGACCATGTTGCGCAGGCGCTGGGAATTGCGCCGGGAAGCCCAATATTTCTGATTGAGCGGACGACCT
ATTGCAAAGGGTCGGAGCCGGTGGATTATGAAAAGCTTTATTATCGGGGCGATCTCATCAAGTTTTGCACGCGATTATCA
CGTCGGACAAGGTAG

Upstream 100 bases:

>100_bases
GAAGCCGCTGGGACCGCTCCATCTGTCAAAAGCATTGCTTCGATATATCGGGACATACCCATCCATTGACATCGTGACGT
AATGACATCATGATGTCATA

Downstream 100 bases:

>100_bases
AAGCCATGACCGGGGTGCTCGATGGAAGCGCAATTGCTTCTTTGTGGTTGTTCGTGGCGGCTTTCGGCGCAAGCATGCTC
GGAGGCATGCTGGGTATGGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNVESDHAPLYAKVEAALAAEIAKGIFPRGSRLPPEDSLIERFGVSRTTVRKAIENLVMRGLVEIRRGKGTFVAEPKIRQ
ELTELSGFVEDMVALGRKPTANLLDKRSVPACEEVAEHLGVAVGTQVYRIERVRLADGVAMSFDETYLPLDIGEKIASND
LEVEPIFSLLENKYGMPLVEADYQLEAVTADDHVAQALGIAPGSPIFLIERTTYCKGSEPVDYEKLYYRGDLIKFCTRLS
RRTR

Sequences:

>Translated_244_residues
MNVESDHAPLYAKVEAALAAEIAKGIFPRGSRLPPEDSLIERFGVSRTTVRKAIENLVMRGLVEIRRGKGTFVAEPKIRQ
ELTELSGFVEDMVALGRKPTANLLDKRSVPACEEVAEHLGVAVGTQVYRIERVRLADGVAMSFDETYLPLDIGEKIASND
LEVEPIFSLLENKYGMPLVEADYQLEAVTADDHVAQALGIAPGSPIFLIERTTYCKGSEPVDYEKLYYRGDLIKFCTRLS
RRTR
>Mature_244_residues
MNVESDHAPLYAKVEAALAAEIAKGIFPRGSRLPPEDSLIERFGVSRTTVRKAIENLVMRGLVEIRRGKGTFVAEPKIRQ
ELTELSGFVEDMVALGRKPTANLLDKRSVPACEEVAEHLGVAVGTQVYRIERVRLADGVAMSFDETYLPLDIGEKIASND
LEVEPIFSLLENKYGMPLVEADYQLEAVTADDHVAQALGIAPGSPIFLIERTTYCKGSEPVDYEKLYYRGDLIKFCTRLS
RRTR

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=227, Percent_Identity=27.7533039647577, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790118, Length=219, Percent_Identity=29.2237442922374, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788418, Length=231, Percent_Identity=27.7056277056277, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1786950, Length=237, Percent_Identity=24.4725738396624, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1790540, Length=226, Percent_Identity=27.8761061946903, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790304, Length=226, Percent_Identity=26.5486725663717, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27130; Mature: 27130

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVESDHAPLYAKVEAALAAEIAKGIFPRGSRLPPEDSLIERFGVSRTTVRKAIENLVMR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
GLVEIRRGKGTFVAEPKIRQELTELSGFVEDMVALGRKPTANLLDKRSVPACEEVAEHLG
HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHC
VAVGTQVYRIERVRLADGVAMSFDETYLPLDIGEKIASNDLEVEPIFSLLENKYGMPLVE
HHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEE
ADYQLEAVTADDHVAQALGIAPGSPIFLIERTTYCKGSEPVDYEKLYYRGDLIKFCTRLS
CCCEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RRTR
HCCC
>Mature Secondary Structure
MNVESDHAPLYAKVEAALAAEIAKGIFPRGSRLPPEDSLIERFGVSRTTVRKAIENLVMR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
GLVEIRRGKGTFVAEPKIRQELTELSGFVEDMVALGRKPTANLLDKRSVPACEEVAEHLG
HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHC
VAVGTQVYRIERVRLADGVAMSFDETYLPLDIGEKIASNDLEVEPIFSLLENKYGMPLVE
HHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEE
ADYQLEAVTADDHVAQALGIAPGSPIFLIERTTYCKGSEPVDYEKLYYRGDLIKFCTRLS
CCCEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RRTR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]