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The map label for this gene is hpaR [H]

Identifier: 225686906

GI number: 225686906

Start: 1140979

End: 1141470

Strand: Direct

Name: hpaR [H]

Synonym: BMEA_B1158

Alternate gene names: 225686906

Gene position: 1140979-1141470 (Clockwise)

Preceding gene: 225686899

Following gene: 225686913

Centisome position: 96.24

GC content: 60.16

Gene sequence:

>492_bases
ATGCAGGATAAAACCAGAATGCAAGATCAACCGTCGTCCAAGACCAAAACCCGGCAGGATGTCCTGCTTCCCCGCAACAC
GCGCCGTTCGGTGCCCATTGCCCTCCTGCGCGCCCGCGAAGCGGTGATGAGCCATTTCCGGCCGATGCTGGCCCAGCACG
ACATCACCGAGCAGCAGTGGCGCGTCATCCGCATTCTGGCCGAAACGGATATTGTCGACGCCTCGGAAATGGCCGAACGC
GCCTTTATCCTTGCGCCTAGCCTCACCCGCATCATCCGCTCGCTTGAGGAACGCGGCATCATCACCAAGACGAGGGATGA
AAATGACGGACGCCGCGTGCTGTTGCAGATCACCCCGGCTGGCCTTGCGATCATCAAGGAAGTGGCCCCGGAAAGCCGCC
TTATCTATCAGATGATCGAGGAACGCTTTGGCCGCGAGCGGATCGACCAGCTTCTGGACATGCTGGACGATCTGGCGGCG
ATCAACGACTGA

Upstream 100 bases:

>100_bases
TTTGTCGCGATTATATTTAACATGTTAATAATATCGTTTATCCCTGTCAAGCCGTTCCCTCGCGTTCCTCCCGTTCCAAA
TCATTGAAAAGCGCAAAAAA

Downstream 100 bases:

>100_bases
TGCCCTCCTCTTCGACCACCGCGCGCACATCGGCCACATAGCGATTGAGGCGTGCGATATTGTCGGGCAGTTCCGGCCTT
GCAGCCGCCCAGCCAATATA

Product: homoprotocatechuate degradation operon regulator HpaR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MQDKTRMQDQPSSKTKTRQDVLLPRNTRRSVPIALLRAREAVMSHFRPMLAQHDITEQQWRVIRILAETDIVDASEMAER
AFILAPSLTRIIRSLEERGIITKTRDENDGRRVLLQITPAGLAIIKEVAPESRLIYQMIEERFGRERIDQLLDMLDDLAA
IND

Sequences:

>Translated_163_residues
MQDKTRMQDQPSSKTKTRQDVLLPRNTRRSVPIALLRAREAVMSHFRPMLAQHDITEQQWRVIRILAETDIVDASEMAER
AFILAPSLTRIIRSLEERGIITKTRDENDGRRVLLQITPAGLAIIKEVAPESRLIYQMIEERFGRERIDQLLDMLDDLAA
IND
>Mature_163_residues
MQDKTRMQDQPSSKTKTRQDVLLPRNTRRSVPIALLRAREAVMSHFRPMLAQHDITEQQWRVIRILAETDIVDASEMAER
AFILAPSLTRIIRSLEERGIITKTRDENDGRRVLLQITPAGLAIIKEVAPESRLIYQMIEERFGRERIDQLLDMLDDLAA
IND

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18873; Mature: 18873

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKTRMQDQPSSKTKTRQDVLLPRNTRRSVPIALLRAREAVMSHFRPMLAQHDITEQQW
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RVIRILAETDIVDASEMAERAFILAPSLTRIIRSLEERGIITKTRDENDGRRVLLQITPA
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEECCH
GLAIIKEVAPESRLIYQMIEERFGRERIDQLLDMLDDLAAIND
HHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDKTRMQDQPSSKTKTRQDVLLPRNTRRSVPIALLRAREAVMSHFRPMLAQHDITEQQW
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RVIRILAETDIVDASEMAERAFILAPSLTRIIRSLEERGIITKTRDENDGRRVLLQITPA
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEECCH
GLAIIKEVAPESRLIYQMIEERFGRERIDQLLDMLDDLAAIND
HHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]