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The map label for this gene is dppC [H]

Identifier: 225686856

GI number: 225686856

Start: 1074278

End: 1074934

Strand: Direct

Name: dppC [H]

Synonym: BMEA_B1096

Alternate gene names: 225686856

Gene position: 1074278-1074934 (Clockwise)

Preceding gene: 225686855

Following gene: 225686857

Centisome position: 90.62

GC content: 59.97

Gene sequence:

>657_bases
ATGGTTGCCTTATCGAACACGTCGGCACGCCAGTTCAAAATACCGGGCTGGTTCACGTTGCCTCTCCTGATCGGCATTCT
CGTCGTCGGTTTCTGGCTCATCGCTACATTCCTTGCGCCCTATATGACGCCCTATGATCCGCTTCAGATGGCAGACCGTC
GTTTGCAGATTCCGAGCTGGTCCCATTGGCTTGGAACGGATGCTCTTGGCCGCGATGTGCTGGCGCGAACCTTGTACGGC
GCCCGGCATTCGCTGCCGATCGCGCTGGTCGTCGTGGTCAGCGCCGTCATCATCGGCGCGCTTGCCGGTGCTGTTGCCGG
ATATAGGGGCGGCTGGGTCGATGCGGCCATTGCCGCCGGTGCCGGCAGCGGGCGCATTCTTTTCAAGCATATTCTCCCGC
TTTGCTGGACCCCTGTATTAATCAGCGCCACCATGGATCTCGGCCAGGTCATTCTGCTGGCCGCCTCACTCAGTTTCATC
GGCCTTGGCGCGACGCCGCCCACGCCGGAGTGGGGGTCGATGATCGCTGAAGGCGCGGTCCATTTCTACAATTGGTGGAT
CGCCATGGGGCCGGGACTGGCAATCCTGACCATTGTTCTGGGCTTCAATTTCATCGGCGATGGTCTTCGCGACTATTTCG
ATCCGCGCTCCAAATGA

Upstream 100 bases:

>100_bases
CGATCGTGGGCGGGATCATGTTCCTCATGACCAATCTTTTGACCGATATTGCCTATGTGCTGGCCAATCCGCGCGTGCGC
CTAGGCTAAAGGGGGAAGAC

Downstream 100 bases:

>100_bases
TCGGGGAACAAGATGTCAAATCTTAACAAAAGTGCTAGCCTTCTCCGCATAGAAAACCTGCGGGTCGGTTTCGGCCGTGA
TGGAATGGTCCTGGATGCGG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVALSNTSARQFKIPGWFTLPLLIGILVVGFWLIATFLAPYMTPYDPLQMADRRLQIPSWSHWLGTDALGRDVLARTLYG
ARHSLPIALVVVVSAVIIGALAGAVAGYRGGWVDAAIAAGAGSGRILFKHILPLCWTPVLISATMDLGQVILLAASLSFI
GLGATPPTPEWGSMIAEGAVHFYNWWIAMGPGLAILTIVLGFNFIGDGLRDYFDPRSK

Sequences:

>Translated_218_residues
MVALSNTSARQFKIPGWFTLPLLIGILVVGFWLIATFLAPYMTPYDPLQMADRRLQIPSWSHWLGTDALGRDVLARTLYG
ARHSLPIALVVVVSAVIIGALAGAVAGYRGGWVDAAIAAGAGSGRILFKHILPLCWTPVLISATMDLGQVILLAASLSFI
GLGATPPTPEWGSMIAEGAVHFYNWWIAMGPGLAILTIVLGFNFIGDGLRDYFDPRSK
>Mature_218_residues
MVALSNTSARQFKIPGWFTLPLLIGILVVGFWLIATFLAPYMTPYDPLQMADRRLQIPSWSHWLGTDALGRDVLARTLYG
ARHSLPIALVVVVSAVIIGALAGAVAGYRGGWVDAAIAAGAGSGRILFKHILPLCWTPVLISATMDLGQVILLAASLSFI
GLGATPPTPEWGSMIAEGAVHFYNWWIAMGPGLAILTIVLGFNFIGDGLRDYFDPRSK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=109, Percent_Identity=46.7889908256881, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787054, Length=108, Percent_Identity=46.2962962962963, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787760, Length=107, Percent_Identity=43.9252336448598, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789889, Length=106, Percent_Identity=39.622641509434, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787498, Length=111, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788505, Length=57, Percent_Identity=54.3859649122807, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23403; Mature: 23403

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALSNTSARQFKIPGWFTLPLLIGILVVGFWLIATFLAPYMTPYDPLQMADRRLQIPSW
CEECCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
SHWLGTDALGRDVLARTLYGARHSLPIALVVVVSAVIIGALAGAVAGYRGGWVDAAIAAG
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
AGSGRILFKHILPLCWTPVLISATMDLGQVILLAASLSFIGLGATPPTPEWGSMIAEGAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
HFYNWWIAMGPGLAILTIVLGFNFIGDGLRDYFDPRSK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVALSNTSARQFKIPGWFTLPLLIGILVVGFWLIATFLAPYMTPYDPLQMADRRLQIPSW
CEECCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
SHWLGTDALGRDVLARTLYGARHSLPIALVVVVSAVIIGALAGAVAGYRGGWVDAAIAAG
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
AGSGRILFKHILPLCWTPVLISATMDLGQVILLAASLSFIGLGATPPTPEWGSMIAEGAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
HFYNWWIAMGPGLAILTIVLGFNFIGDGLRDYFDPRSK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]