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The map label for this gene is yddQ [C]

Identifier: 225686845

GI number: 225686845

Start: 1057204

End: 1058094

Strand: Reverse

Name: yddQ [C]

Synonym: BMEA_B1084

Alternate gene names: 225686845

Gene position: 1058094-1057204 (Counterclockwise)

Preceding gene: 225686846

Following gene: 225686844

Centisome position: 89.25

GC content: 61.84

Gene sequence:

>891_bases
ATGACTGAGCTGGCAAGCCCGACTTCCTTCTCGATGCCGGATATCGGCAAGAGCCCCGTTGTGCTGACCGCCCGACGCCT
GATGCGGCACCGCTCATTCCGCATCGGCCTGGTCCTTCTGCTGATCGTGGTTCTGGCAGCCGTTCTCGCCCCCTGGATAA
CCAATGGCAAGCCCAACGCGACATCCGTGCGGATGCGGTTTCAGCCGCCCGGCCTCGAACACCTGTTCGGGACGGACAAT
TTCGGCCGTGACCTGTGGATACGGGTTCTTTACGGCGCGCAGGTTTCTCTGTGGATCGGGCTGACGGTCGCGGTTCTTTC
CGCCATTCTGGGCGCGATTATCGGCATTGCGGCGGCATGGTACCGGCGTTTCGACACTTTGCTCATGCGGGTGATGGACG
CCTTGATGGCCTTTCCCGCCATCCTGCTCGCCATTGGCATCAGTGCTGCCCTCGGGCCCCATCTTTCCTTGGTCATCATT
GCCCTGACCTCGGCCTATATTCCCCGCTGCGCCCGCATCGTGCGCGCATCCGCCCTGGTGCTGCGGGAAACCGATTATGT
CGATGCGGCCCGGCTGGCGGGCGCTTCAGATCTGCGCATCATCACCCGGCACATCCTCCCGAATTGCCTCGCACCGCTTC
TGGTGACGCTCACCTTCGTCTTTGCCTATGCCATCCTCGCCGAAGCCACGTTGAGTTTCCTTGGCATCGGAACCCCGCCG
CCCCACGCAAGCTGGGGAAGCATCGTGGCGCAGGGCAGGGACTATTTCGTCGATGCGTGGTGGATCATGCTCTTTCCGGG
CATCGCGATCACCATATCGGCCCTGGCGATCAATCTCATCGGCGACGGTTTGAGAGACGTCCTCGATCCACGGCTTAAAA
TGGAGGGCTGA

Upstream 100 bases:

>100_bases
CCCGTCGTGCAGGGAACCATGCTGTTCCTCGGCTTCCTCTTCGTTGCCATCAATGTGCTGGTGGACATCCTTTATACAAT
CGCTGATCCGAGGGTACGCT

Downstream 100 bases:

>100_bases
CGATGACGATTTCCCTCAAGACTGCTCCTCTGCTCGAAGTCTCCAATCTCAGCGTGGATTTTCGCACCGACGGCGGCTGG
ATCAATGCCGTGGATGATGT

Product: ABC di/oligopeptide transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTELASPTSFSMPDIGKSPVVLTARRLMRHRSFRIGLVLLLIVVLAAVLAPWITNGKPNATSVRMRFQPPGLEHLFGTDN
FGRDLWIRVLYGAQVSLWIGLTVAVLSAILGAIIGIAAAWYRRFDTLLMRVMDALMAFPAILLAIGISAALGPHLSLVII
ALTSAYIPRCARIVRASALVLRETDYVDAARLAGASDLRIITRHILPNCLAPLLVTLTFVFAYAILAEATLSFLGIGTPP
PHASWGSIVAQGRDYFVDAWWIMLFPGIAITISALAINLIGDGLRDVLDPRLKMEG

Sequences:

>Translated_296_residues
MTELASPTSFSMPDIGKSPVVLTARRLMRHRSFRIGLVLLLIVVLAAVLAPWITNGKPNATSVRMRFQPPGLEHLFGTDN
FGRDLWIRVLYGAQVSLWIGLTVAVLSAILGAIIGIAAAWYRRFDTLLMRVMDALMAFPAILLAIGISAALGPHLSLVII
ALTSAYIPRCARIVRASALVLRETDYVDAARLAGASDLRIITRHILPNCLAPLLVTLTFVFAYAILAEATLSFLGIGTPP
PHASWGSIVAQGRDYFVDAWWIMLFPGIAITISALAINLIGDGLRDVLDPRLKMEG
>Mature_295_residues
TELASPTSFSMPDIGKSPVVLTARRLMRHRSFRIGLVLLLIVVLAAVLAPWITNGKPNATSVRMRFQPPGLEHLFGTDNF
GRDLWIRVLYGAQVSLWIGLTVAVLSAILGAIIGIAAAWYRRFDTLLMRVMDALMAFPAILLAIGISAALGPHLSLVIIA
LTSAYIPRCARIVRASALVLRETDYVDAARLAGASDLRIITRHILPNCLAPLLVTLTFVFAYAILAEATLSFLGIGTPPP
HASWGSIVAQGRDYFVDAWWIMLFPGIAITISALAINLIGDGLRDVLDPRLKMEG

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=255, Percent_Identity=41.5686274509804, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=38.86925795053, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=42.5196850393701, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=33.7037037037037, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=36.0323886639676, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1787549, Length=268, Percent_Identity=31.7164179104478, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=32.15859030837, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32119; Mature: 31988

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELASPTSFSMPDIGKSPVVLTARRLMRHRSFRIGLVLLLIVVLAAVLAPWITNGKPNA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSVRMRFQPPGLEHLFGTDNFGRDLWIRVLYGAQVSLWIGLTVAVLSAILGAIIGIAAAW
CEEEEEECCCCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRRFDTLLMRVMDALMAFPAILLAIGISAALGPHLSLVIIALTSAYIPRCARIVRASALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRETDYVDAARLAGASDLRIITRHILPNCLAPLLVTLTFVFAYAILAEATLSFLGIGTPP
HHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PHASWGSIVAQGRDYFVDAWWIMLFPGIAITISALAINLIGDGLRDVLDPRLKMEG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
TELASPTSFSMPDIGKSPVVLTARRLMRHRSFRIGLVLLLIVVLAAVLAPWITNGKPNA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSVRMRFQPPGLEHLFGTDNFGRDLWIRVLYGAQVSLWIGLTVAVLSAILGAIIGIAAAW
CEEEEEECCCCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRRFDTLLMRVMDALMAFPAILLAIGISAALGPHLSLVIIALTSAYIPRCARIVRASALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRETDYVDAARLAGASDLRIITRHILPNCLAPLLVTLTFVFAYAILAEATLSFLGIGTPP
HHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PHASWGSIVAQGRDYFVDAWWIMLFPGIAITISALAINLIGDGLRDVLDPRLKMEG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA