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The map label for this gene is rbsB [H]

Identifier: 225686752

GI number: 225686752

Start: 961774

End: 962943

Strand: Reverse

Name: rbsB [H]

Synonym: BMEA_B0981

Alternate gene names: 225686752

Gene position: 962943-961774 (Counterclockwise)

Preceding gene: 225686754

Following gene: 225686751

Centisome position: 81.23

GC content: 57.35

Gene sequence:

>1170_bases
ATGATGCATTTTATAACCAGAGCCGGATCGGGCTTGCGTATGCTGCTGGCGGGCGTAAGCGGCGCTGCACTTCTGTGCAT
GGCGGGTGCGGGGTCGGCTGAAGCGGCTGCAAATTGCGTGAAGGGAGATCGCAAGGCGCCGTATATGGTGGGCTGGGCAA
ATATCTATGCCGTGCCGACCTGGATGAAGCAGACTGAGGACACGATTGTCGATGAAGTTGCACAGCTGAAGAAGGAAGGT
CTGGTCAAGGACCTGATGATTACCGATGCGCAGGGCAATGCGCAGACGCAAATCCAGCAAATCCAATCGATGATCGACGC
CAATATGGATGCAATCGTCATTGATGCAGGCTCGTCTTCCGCGCTCGACCGTGTCATTGCCGATGCTTGCGAGAAAGGTA
TCGCCGTCATCAATTTCGACAGCCTTGTCGATACGGAAAATCTGACCGCAAAAATCAATACCGATTCCGCCGAATGGGGC
GAACGGGCAGCCCAGTGGATGGTTGACCAACTGGGTGGCAAGGGCAAGATCATCATCATGAATGGCCCCGCAGGCGTTTC
GGTCAGCGATGATCGCCGCAAGGGCGCCCAGCCGGTTCTCGACGCCAACAAGGGCATCGAGATCATCACCGAGACGAATA
CGGAATATAATGTCGCTCCCGCTCAGGAAGCGATGACCAGCCTGCTGTTCGCCAACCCGGAAATCGACGGTGTACTGTCG
CTAAGCGGCGCAATCGCGGCTGGCGCAGTTCTCGCCTTTGACCGCCAGGGGCGCGATCCGGTGCCGATAACGGGTGAAAA
TGCCCGTCAGTTTCTGGAACTCTGGAAGGAAAAAGGCCTGAAAGCCTGGGCGACCATGCAGCCCAACTGGCTTGGTGCAT
TCTCCGTCTATGCAGCCGTACAGGCCCTTGAAGGCAAGGATATTCCAAAGTCGATCAAGGTTCCGCTTCCTGTCATCGAT
GCCAGCAATGTCGATACTTATCTGGCGCGCGCGGACAAGTTTCCTGCCGACGGTTATGTCTATTCGGACTACGACCGGGC
CCTGTTCGACAAGTTGCTGGGGCAGCAAGCGGCGCCATGCAGGTTTCATCCAGGCCTGTCGTGGACGCGCCGGCTCCGCT
GCTCGAAGCGCGCAACGTGTTCAAGGGGTTTTTCGGCAACCCGGTGCTGA

Upstream 100 bases:

>100_bases
AAATAATTCCTATGATTGCCGTGTCTGATAATTCAGACATATGTACACTATAACAGACATAAGCAATGCTGTGAATGTGT
CAAATTTGGAGGAGGGGACA

Downstream 100 bases:

>100_bases
AGGGGGTCAGCATCGCCTTGCGGCCCGGCCGCGTGCACGCACTGCTTGGAGAAAACGGTGCGGGCAAGTCCACACTCATC
AATCTGCTGTCCGGCGCCTT

Product: rhizopine-binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MMHFITRAGSGLRMLLAGVSGAALLCMAGAGSAEAAANCVKGDRKAPYMVGWANIYAVPTWMKQTEDTIVDEVAQLKKEG
LVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGSSSALDRVIADACEKGIAVINFDSLVDTENLTAKINTDSAEWG
ERAAQWMVDQLGGKGKIIIMNGPAGVSVSDDRRKGAQPVLDANKGIEIITETNTEYNVAPAQEAMTSLLFANPEIDGVLS
LSGAIAAGAVLAFDRQGRDPVPITGENARQFLELWKEKGLKAWATMQPNWLGAFSVYAAVQALEGKDIPKSIKVPLPVID
ASNVDTYLARADKFPADGYVYSDYDRALFDKLLGQQAAPCRFHPGLSWTRRLRCSKRATCSRGFSATRC

Sequences:

>Translated_389_residues
MMHFITRAGSGLRMLLAGVSGAALLCMAGAGSAEAAANCVKGDRKAPYMVGWANIYAVPTWMKQTEDTIVDEVAQLKKEG
LVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGSSSALDRVIADACEKGIAVINFDSLVDTENLTAKINTDSAEWG
ERAAQWMVDQLGGKGKIIIMNGPAGVSVSDDRRKGAQPVLDANKGIEIITETNTEYNVAPAQEAMTSLLFANPEIDGVLS
LSGAIAAGAVLAFDRQGRDPVPITGENARQFLELWKEKGLKAWATMQPNWLGAFSVYAAVQALEGKDIPKSIKVPLPVID
ASNVDTYLARADKFPADGYVYSDYDRALFDKLLGQQAAPCRFHPGLSWTRRLRCSKRATCSRGFSATRC
>Mature_389_residues
MMHFITRAGSGLRMLLAGVSGAALLCMAGAGSAEAAANCVKGDRKAPYMVGWANIYAVPTWMKQTEDTIVDEVAQLKKEG
LVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGSSSALDRVIADACEKGIAVINFDSLVDTENLTAKINTDSAEWG
ERAAQWMVDQLGGKGKIIIMNGPAGVSVSDDRRKGAQPVLDANKGIEIITETNTEYNVAPAQEAMTSLLFANPEIDGVLS
LSGAIAAGAVLAFDRQGRDPVPITGENARQFLELWKEKGLKAWATMQPNWLGAFSVYAAVQALEGKDIPKSIKVPLPVID
ASNVDTYLARADKFPADGYVYSDYDRALFDKLLGQQAAPCRFHPGLSWTRRLRCSKRATCSRGFSATRC

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=265, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790192, Length=298, Percent_Identity=23.489932885906, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789990, Length=199, Percent_Identity=28.643216080402, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 41812; Mature: 41812

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHFITRAGSGLRMLLAGVSGAALLCMAGAGSAEAAANCVKGDRKAPYMVGWANIYAVPT
CCEEEECCCCCCEEHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEHHEEEECH
WMKQTEDTIVDEVAQLKKEGLVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGSSS
HHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH
ALDRVIADACEKGIAVINFDSLVDTENLTAKINTDSAEWGERAAQWMVDQLGGKGKIIIM
HHHHHHHHHHHCCEEEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
NGPAGVSVSDDRRKGAQPVLDANKGIEIITETNTEYNVAPAQEAMTSLLFANPEIDGVLS
ECCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEE
LSGAIAAGAVLAFDRQGRDPVPITGENARQFLELWKEKGLKAWATMQPNWLGAFSVYAAV
ECCHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
QALEGKDIPKSIKVPLPVIDASNVDTYLARADKFPADGYVYSDYDRALFDKLLGQQAAPC
HHHCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCC
RFHPGLSWTRRLRCSKRATCSRGFSATRC
EECCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMHFITRAGSGLRMLLAGVSGAALLCMAGAGSAEAAANCVKGDRKAPYMVGWANIYAVPT
CCEEEECCCCCCEEHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEHHEEEECH
WMKQTEDTIVDEVAQLKKEGLVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGSSS
HHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH
ALDRVIADACEKGIAVINFDSLVDTENLTAKINTDSAEWGERAAQWMVDQLGGKGKIIIM
HHHHHHHHHHHCCEEEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
NGPAGVSVSDDRRKGAQPVLDANKGIEIITETNTEYNVAPAQEAMTSLLFANPEIDGVLS
ECCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEE
LSGAIAAGAVLAFDRQGRDPVPITGENARQFLELWKEKGLKAWATMQPNWLGAFSVYAAV
ECCHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
QALEGKDIPKSIKVPLPVIDASNVDTYLARADKFPADGYVYSDYDRALFDKLLGQQAAPC
HHHCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCC
RFHPGLSWTRRLRCSKRATCSRGFSATRC
EECCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]