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The map label for this gene is yvoA [H]

Identifier: 225686672

GI number: 225686672

Start: 874513

End: 875280

Strand: Reverse

Name: yvoA [H]

Synonym: BMEA_B0895

Alternate gene names: 225686672

Gene position: 875280-874513 (Counterclockwise)

Preceding gene: 225686673

Following gene: 225686671

Centisome position: 73.83

GC content: 61.59

Gene sequence:

>768_bases
ATGAATAGAACCACTTTGATCAATGCCATTGAAGGGCGCGGGTTGCGCGATCCGCAGCTTGCGGGGCCGCTCTATCGCAG
CCTCGCGCGGATTCTGGGCGAACTGATCGAGGAAGGGCAGCTTGCGCCCGCAGTGGGGCTTCCGCCGGAACGCGACCTTG
CGGAGCAATTGGGCATCGGCCGCATCACCGTGCGCAAGGCCTATAAGGAACTTCTGACCCAGGGCTTTGTGGAATCGCGG
CGCGGCAGCGGCACCTTCGTTGCTGAACGGCCAGTGCGCATCAGCCAGCATTTGTGGCGGCTCACTTCCTTCTCGCAGGA
TATGATTTCGCGCGGTAAGGAACCCGGCGCGCGCGTGGTGACGAACAGGATCGACAAGCCTTCGCCGGATGAGGCTTTCC
GGCTCGGCATCGGTGTGGATGCCAGTGTCGTGCGGCTTGATCGCCTGCGACTTGCCGATGGTGTTCCTATGGCCTTCGAG
CGCGCGGTGGTGCCGCGCCATTATCTCGATCAGGACCGTGTGGACGAAACATCGCTTTACGAAGCACTGGCGCGGCGCGG
CCACAAGCCGGTGCGCGCCTTGCAGCGCCTCACCGCCGTTACGCTCGACCCCGGCACTGCCCATTTGCTGGGTGTGCACC
ACGGCGCGCCGGCCCTGCTCATCGAACGTGTCTCGCATCTCGAAGACGATCGGATCGTTGAATATACCCGCTCGCATTAT
CGTGCTGACGCTTATGACTTTGTTGCGGAATTGAAAATTGGAGAATGA

Upstream 100 bases:

>100_bases
GAATGAGAGTGCTTGAAATTAAAAATGCCCGCCGTCGAGCGGGCATTTTCATGAAAACATCACTTGCTATTGGTTCTATA
TCGGTTCTATTATACCGCGC

Downstream 100 bases:

>100_bases
CTATGAACAGCCCTTCCTCCCTGATGTTGCAGGAAACAGAACAATCGCCTGCCGTCGTTGCGAAGCTGCTTGAAAAAGAG
GCGGGGACGTTTGCGGAAAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNRTTLINAIEGRGLRDPQLAGPLYRSLARILGELIEEGQLAPAVGLPPERDLAEQLGIGRITVRKAYKELLTQGFVESR
RGSGTFVAERPVRISQHLWRLTSFSQDMISRGKEPGARVVTNRIDKPSPDEAFRLGIGVDASVVRLDRLRLADGVPMAFE
RAVVPRHYLDQDRVDETSLYEALARRGHKPVRALQRLTAVTLDPGTAHLLGVHHGAPALLIERVSHLEDDRIVEYTRSHY
RADAYDFVAELKIGE

Sequences:

>Translated_255_residues
MNRTTLINAIEGRGLRDPQLAGPLYRSLARILGELIEEGQLAPAVGLPPERDLAEQLGIGRITVRKAYKELLTQGFVESR
RGSGTFVAERPVRISQHLWRLTSFSQDMISRGKEPGARVVTNRIDKPSPDEAFRLGIGVDASVVRLDRLRLADGVPMAFE
RAVVPRHYLDQDRVDETSLYEALARRGHKPVRALQRLTAVTLDPGTAHLLGVHHGAPALLIERVSHLEDDRIVEYTRSHY
RADAYDFVAELKIGE
>Mature_255_residues
MNRTTLINAIEGRGLRDPQLAGPLYRSLARILGELIEEGQLAPAVGLPPERDLAEQLGIGRITVRKAYKELLTQGFVESR
RGSGTFVAERPVRISQHLWRLTSFSQDMISRGKEPGARVVTNRIDKPSPDEAFRLGIGVDASVVRLDRLRLADGVPMAFE
RAVVPRHYLDQDRVDETSLYEALARRGHKPVRALQRLTAVTLDPGTAHLLGVHHGAPALLIERVSHLEDDRIVEYTRSHY
RADAYDFVAELKIGE

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=228, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786950, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790540, Length=212, Percent_Identity=26.8867924528302, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790118, Length=226, Percent_Identity=25.2212389380531, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28477; Mature: 28477

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTTLINAIEGRGLRDPQLAGPLYRSLARILGELIEEGQLAPAVGLPPERDLAEQLGIG
CCCCCEEEHHCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
RITVRKAYKELLTQGFVESRRGSGTFVAERPVRISQHLWRLTSFSQDMISRGKEPGARVV
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TNRIDKPSPDEAFRLGIGVDASVVRLDRLRLADGVPMAFERAVVPRHYLDQDRVDETSLY
HHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCHHHHH
EALARRGHKPVRALQRLTAVTLDPGTAHLLGVHHGAPALLIERVSHLEDDRIVEYTRSHY
HHHHHCCCHHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH
RADAYDFVAELKIGE
CCHHHHHHHHHCCCC
>Mature Secondary Structure
MNRTTLINAIEGRGLRDPQLAGPLYRSLARILGELIEEGQLAPAVGLPPERDLAEQLGIG
CCCCCEEEHHCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
RITVRKAYKELLTQGFVESRRGSGTFVAERPVRISQHLWRLTSFSQDMISRGKEPGARVV
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TNRIDKPSPDEAFRLGIGVDASVVRLDRLRLADGVPMAFERAVVPRHYLDQDRVDETSLY
HHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCHHHHH
EALARRGHKPVRALQRLTAVTLDPGTAHLLGVHHGAPALLIERVSHLEDDRIVEYTRSHY
HHHHHCCCHHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH
RADAYDFVAELKIGE
CCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]