| Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_012442 |
| Length | 1,185,518 |
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The map label for this gene is tpiA [H]
Identifier: 225686631
GI number: 225686631
Start: 833726
End: 834496
Strand: Direct
Name: tpiA [H]
Synonym: BMEA_B0848
Alternate gene names: 225686631
Gene position: 833726-834496 (Clockwise)
Preceding gene: 225686630
Following gene: 225686632
Centisome position: 70.33
GC content: 59.92
Gene sequence:
>771_bases ATGACCAAATTCTGGATTGGCACAAGCTGGAAAATGAACAAGACGCTGGCCGAAGCCCGCCTTTTCGCGGAAGCGCTGAA AGCCGCCGATGCAGGCCGCTCGCCAGACATCCAGCGTTTTGTCATCCCGCCTTTCACCGCCGTGCGTGAGGTGAAGGAAA TCCTCTCCGGCACATCCGTGAAGGTCGGCGCGCAGAACATGCACTGGGCCGATCAGGGTACATGGACCGGCGAAATCTCC CCGCTGATGCTGAAAGATTGCAATCTCGACATTGTTGAACTGGGCCATTCGGAGCGCCGCGAACATTTCGGCGAGACCAA CGAGACGGTCGGCTTGAAAGTGGAAGCCGCCGTGCGCCACGGCCTGATCCCGCTCATCTGCATCGGTGAAACGCTGGAAG ACCGTGAAAGCGGACGCGCAGCCGCGGTGCTTGAAGAAGAAGTGCGCGGCGCGCTTTCCAAGCTTTCCGAGGCGCAGAAG CAGGCCGAAATCCTCTTCGCCTATGAGCCAGTCTGGGCCATCGGCGAAAACGGCATTCCCGCTTCCGCCGACTATGCCGA TGCGCGACAGGCCGAAATCATCGCGGTGGCACAAAGCGTGCTCGCTCGCCGCGTGCCGTGCCTTTATGGCGGCTCGGTCA ATCCGGGCAATTGCGAAGAACTGATCGCCTGCCCGCATATCGATGGGCTTTTCATCGGCCGTTCGGCGTGGAACGTCGAA GGCTATCTCGACATTCTGGCCAGGTGCGCCACCAAGGTTCAAGCGAATTAA
Upstream 100 bases:
>100_bases CGCGATCATCACCGATGCATCCCCCGGCACGGCGGTTTTGAACGGACTGAAACAGGCCGGGATCAAACTGACAATAGCAG CAGACTAGGAACAGTTACGC
Downstream 100 bases:
>100_bases GGAGTAAAATCATGAAAGTAGCAGTTGCAGGCGACAGCGCCGGCGAAGGCCTGGCCAAGGTTCTCGCCGATCACCTCAAG GACCGCTTCGAGGTTTCGGA
Product: triosephosphate isomerase
Products: NA
Alternate protein names: TIM 2; Triose-phosphate isomerase 2 [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTKFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSVKVGAQNMHWADQGTWTGEIS PLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRHGLIPLICIGETLEDRESGRAAAVLEEEVRGALSKLSEAQK QAEILFAYEPVWAIGENGIPASADYADARQAEIIAVAQSVLARRVPCLYGGSVNPGNCEELIACPHIDGLFIGRSAWNVE GYLDILARCATKVQAN
Sequences:
>Translated_256_residues MTKFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSVKVGAQNMHWADQGTWTGEIS PLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRHGLIPLICIGETLEDRESGRAAAVLEEEVRGALSKLSEAQK QAEILFAYEPVWAIGENGIPASADYADARQAEIIAVAQSVLARRVPCLYGGSVNPGNCEELIACPHIDGLFIGRSAWNVE GYLDILARCATKVQAN >Mature_255_residues TKFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSVKVGAQNMHWADQGTWTGEISP LMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRHGLIPLICIGETLEDRESGRAAAVLEEEVRGALSKLSEAQKQ AEILFAYEPVWAIGENGIPASADYADARQAEIIAVAQSVLARRVPCLYGGSVNPGNCEELIACPHIDGLFIGRSAWNVEG YLDILARCATKVQAN
Specific function: Plays an important role in several metabolic pathways. [C]
COG id: COG0149
COG function: function code G; Triosephosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the triosephosphate isomerase family [H]
Homologues:
Organism=Homo sapiens, GI4507645, Length=247, Percent_Identity=34.412955465587, Blast_Score=138, Evalue=4e-33, Organism=Homo sapiens, GI226529917, Length=247, Percent_Identity=34.412955465587, Blast_Score=138, Evalue=5e-33, Organism=Escherichia coli, GI1790353, Length=217, Percent_Identity=33.6405529953917, Blast_Score=121, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17536593, Length=235, Percent_Identity=37.4468085106383, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320255, Length=247, Percent_Identity=31.5789473684211, Blast_Score=118, Evalue=8e-28, Organism=Drosophila melanogaster, GI28572008, Length=251, Percent_Identity=35.4581673306773, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI28572006, Length=251, Percent_Identity=35.4581673306773, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI28572004, Length=249, Percent_Identity=34.9397590361446, Blast_Score=128, Evalue=4e-30,
Paralogues:
None
Copy number: 1120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022896 - InterPro: IPR000652 - InterPro: IPR020861 [H]
Pfam domain/function: PF00121 TIM [H]
EC number: =5.3.1.1 [H]
Molecular weight: Translated: 27901; Mature: 27770
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00889 CNMP_BINDING_2 ; PS00171 TIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSV CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCCE KVGAQNMHWADQGTWTGEISPLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRH EECCCCCCCCCCCCCCCCCCCEEEECCCEEHEECCCHHHHHHCCCCCCEEEEEEHHHHHH GLIPLICIGETLEDRESGRAAAVLEEEVRGALSKLSEAQKQAEILFAYEPVWAIGENGIP CCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCC ASADYADARQAEIIAVAQSVLARRVPCLYGGSVNPGNCEELIACPHIDGLFIGRSAWNVE CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHEEECCCCCCEEECCCCCCHH GYLDILARCATKVQAN HHHHHHHHHHHHHCCC >Mature Secondary Structure TKFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSV CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCCE KVGAQNMHWADQGTWTGEISPLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRH EECCCCCCCCCCCCCCCCCCCEEEECCCEEHEECCCHHHHHHCCCCCCEEEEEEHHHHHH GLIPLICIGETLEDRESGRAAAVLEEEVRGALSKLSEAQKQAEILFAYEPVWAIGENGIP CCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCC ASADYADARQAEIIAVAQSVLARRVPCLYGGSVNPGNCEELIACPHIDGLFIGRSAWNVE CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHEEECCCCCCEEECCCCCCHH GYLDILARCATKVQAN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10708387 [H]