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The map label for this gene is lsrR [H]

Identifier: 225686629

GI number: 225686629

Start: 831911

End: 832861

Strand: Direct

Name: lsrR [H]

Synonym: BMEA_B0846

Alternate gene names: 225686629

Gene position: 831911-832861 (Clockwise)

Preceding gene: 225686628

Following gene: 225686630

Centisome position: 70.17

GC content: 59.83

Gene sequence:

>951_bases
ATGGCAGATGCAGACGATTCTCTGGCGCTTCGCGCCGCCTGGCTTCATTTCGTCGCCGGCATGACTCAGTCTGCCGTTGC
CAAGCGCCTTGGCCTGCCTTCGGTGAAGGCGCATCGTCTCATCGCCAAGGCCGTTGCCGACGGCGCGGTGAAAGTGACCA
TCGACGGTGACATCACCGAATGCATCGATCTGGAAAACCGTCTGGCCGATCTTTACGGCCTCGATTATTGCGAGGTCGCA
CCCGATATTGGCGAGGAAGGCCTGCCGCTGATGGCGCTTGGCCATGCGGGCGCGAATTTCATGCGCCGCGAAATCGAACA
TGGCGATCATGAGGTCATCGGCATCGGCCATGGCCGCACACTTTCGGCAGCGGTTGTTTATATGCCGCGTGTCATGGCCA
ATGATCTGCGTTTCGTCTCGCTGCTGGGCGGCCTCACGCGCAATTTTGCCGCCAACCCGCATGACGTGATGCACCGCATC
GCGGAAAAAACCGGAATGCCCGCTTATATGATGCCGGTGCCCTTCTTCGCCAATACGGCGGAAGACCGCGAAGTGCTGCT
GGCCCAACGCGGTGTCACCACGGTTTTCGACATGGGTTGCCGTGCGGAACTGAAGATCGTCGGCATTGGAACGGTCGATG
CGCAGGCGCAGCTTGTCACATCCGGCATGATAGAACTTGGCGAACTGGAAGAGATCGCCAACCTCGGCGGCGTCGGCGAA
ATGCTCGGCCATTTCTTCAATGCCAATGGCCAATGGCTGGAAACCGCGCTGACGGGCCGCACCATCGCGGCTTCCGTGGA
AAACGCCGATATGAGCCGTATCGTGGCGCTTGCAGGCGGTCTTTCCAAGGTGGACGCCATTCGCGCCGTGCTGAAAAGCG
GGCGTCTTTACGGCCTCATCACCGACGAACGGACAGCAAAGGCCCTTATCGGCCAGCCGAATGGAAAATAA

Upstream 100 bases:

>100_bases
TCCACAGATTGCAGAAAGTGTGGCTTTCTGGGCGCCGCACATTGACACCGGCGCTAAGGACTTGAAGATATAGGAAATTT
CCAGAACCGGACCGCGTTCA

Downstream 100 bases:

>100_bases
CAAAATCACATTTTTGCCGTGGATTTTTTTGTGATTTTGTGATCTAACTTCGTGCGATAATGTTCCGCCCAACAGATCGG
ATAAAGCGTGAAGCGCGACG

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MADADDSLALRAAWLHFVAGMTQSAVAKRLGLPSVKAHRLIAKAVADGAVKVTIDGDITECIDLENRLADLYGLDYCEVA
PDIGEEGLPLMALGHAGANFMRREIEHGDHEVIGIGHGRTLSAAVVYMPRVMANDLRFVSLLGGLTRNFAANPHDVMHRI
AEKTGMPAYMMPVPFFANTAEDREVLLAQRGVTTVFDMGCRAELKIVGIGTVDAQAQLVTSGMIELGELEEIANLGGVGE
MLGHFFNANGQWLETALTGRTIAASVENADMSRIVALAGGLSKVDAIRAVLKSGRLYGLITDERTAKALIGQPNGK

Sequences:

>Translated_316_residues
MADADDSLALRAAWLHFVAGMTQSAVAKRLGLPSVKAHRLIAKAVADGAVKVTIDGDITECIDLENRLADLYGLDYCEVA
PDIGEEGLPLMALGHAGANFMRREIEHGDHEVIGIGHGRTLSAAVVYMPRVMANDLRFVSLLGGLTRNFAANPHDVMHRI
AEKTGMPAYMMPVPFFANTAEDREVLLAQRGVTTVFDMGCRAELKIVGIGTVDAQAQLVTSGMIELGELEEIANLGGVGE
MLGHFFNANGQWLETALTGRTIAASVENADMSRIVALAGGLSKVDAIRAVLKSGRLYGLITDERTAKALIGQPNGK
>Mature_315_residues
ADADDSLALRAAWLHFVAGMTQSAVAKRLGLPSVKAHRLIAKAVADGAVKVTIDGDITECIDLENRLADLYGLDYCEVAP
DIGEEGLPLMALGHAGANFMRREIEHGDHEVIGIGHGRTLSAAVVYMPRVMANDLRFVSLLGGLTRNFAANPHDVMHRIA
EKTGMPAYMMPVPFFANTAEDREVLLAQRGVTTVFDMGCRAELKIVGIGTVDAQAQLVTSGMIELGELEEIANLGGVGEM
LGHFFNANGQWLETALTGRTIAASVENADMSRIVALAGGLSKVDAIRAVLKSGRLYGLITDERTAKALIGQPNGK

Specific function: Regulates transcription of many different genes. In the absence of autoinducer 2 (AI-2), represses transcription of the lsrACDBFG operon and its own transcription. In the presence of AI- 2, lsrR is inactivated by binding phospho-AI-2, leading to the trans

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=308, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082414, Length=314, Percent_Identity=25.1592356687898, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 33675; Mature: 33544

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADADDSLALRAAWLHFVAGMTQSAVAKRLGLPSVKAHRLIAKAVADGAVKVTIDGDITE
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCHHH
CIDLENRLADLYGLDYCEVAPDIGEEGLPLMALGHAGANFMRREIEHGDHEVIGIGHGRT
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCC
LSAAVVYMPRVMANDLRFVSLLGGLTRNFAANPHDVMHRIAEKTGMPAYMMPVPFFANTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC
EDREVLLAQRGVTTVFDMGCRAELKIVGIGTVDAQAQLVTSGMIELGELEEIANLGGVGE
CHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
MLGHFFNANGQWLETALTGRTIAASVENADMSRIVALAGGLSKVDAIRAVLKSGRLYGLI
HHHHHHCCCCCEEHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEE
TDERTAKALIGQPNGK
ECCHHHHHHCCCCCCC
>Mature Secondary Structure 
ADADDSLALRAAWLHFVAGMTQSAVAKRLGLPSVKAHRLIAKAVADGAVKVTIDGDITE
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCHHH
CIDLENRLADLYGLDYCEVAPDIGEEGLPLMALGHAGANFMRREIEHGDHEVIGIGHGRT
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCC
LSAAVVYMPRVMANDLRFVSLLGGLTRNFAANPHDVMHRIAEKTGMPAYMMPVPFFANTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC
EDREVLLAQRGVTTVFDMGCRAELKIVGIGTVDAQAQLVTSGMIELGELEEIANLGGVGE
CHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
MLGHFFNANGQWLETALTGRTIAASVENADMSRIVALAGGLSKVDAIRAVLKSGRLYGLI
HHHHHHCCCCCEEHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEE
TDERTAKALIGQPNGK
ECCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA