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The map label for this gene is xylB [H]

Identifier: 225686626

GI number: 225686626

Start: 827869

End: 829422

Strand: Direct

Name: xylB [H]

Synonym: BMEA_B0843

Alternate gene names: 225686626

Gene position: 827869-829422 (Clockwise)

Preceding gene: 225686625

Following gene: 225686627

Centisome position: 69.83

GC content: 62.68

Gene sequence:

>1554_bases
ATGCGTGAAAAAGGTGACATCATCATCGGCATCGACGCGGGCACATCCGTGCTCAAGGCCGTCGCTTTCGATTTCAGCGG
ACGCCAGATCGAATCTGCCGCCGTTCGCAACACATATGTCACTGGCGATCATGGCGCCGTCACACAATCGCTTGCCCAAA
CATGGCAGGACTGCGCGCGCGCCTTGCGCGATCTTGGCGCCAAGCTGCCGGGCCTTGCCCAACGCACCGCCGCGATTGCG
GTCACCGGACAGGGCGACGGAACATGGCTTGTCGGCAAGGATAATCGCCCGGTAGGTGATGCCTGGATCTGGCTTGATGC
CCGCGCTGCCTCAACCGTGACACGGCTTGCCGCAGGCCCGATGAACCGCGCGCGTTTTGAAGCGACCGGCACCGGGCTCA
ACACCTGCCAGCAGGGCGCGCAGATGGCGCATATGGACACAATCGCGCCAGAGCTTCTGGACAATGCCAAAGCGGCGCTC
CATTGCAAGGACTGGCTCTATCTCAATCTCACTGGCGTTCGCGCCACCGATCCCTCGGAAGCAAGCTTCACCTTCGGCAA
TTTCCGCACACGCCAGTATGATGATGTGGTCATCGAGGCGCTGGGGCTTCAGAAACGGCGCAATCTCCTTCCTGAAATCA
TCGACGGGTCGCAGTCACAGCATCCGCTTTCTGCGGAAGCTGCGGCAGCGACCGGCCTTCTTGCCGGAACGCCGGTCAGC
CTCGGCTATGTCGATATGGCCATGACCGCGCTTGGCGCAGGCGTATGCGGCGGCACGGCGGGGGCCGGATGCTCCACCAT
CGGTTCGACCGGTGTGCATATGCGCGCCAAGCCGGTTGCCGATATTCATCTGAACAAGGAAGGCACAGGCTACGTCATCG
CGCTGCCCATTCCCGGCATCGTCACGCAGGTGCAGACCAATATGGGCGCGACAATCAATATAGACTGGATATTGCAGGTC
GCAGCCGACCTCATGTCCACGCCGGAAAAGCCGGTTTCGCTTGGCGATCTCATTCCCCGCCTTGACGACTGGTTCAACGC
CAGCCGTCCTGGCGCGATCCTCTATCACCCTTATATTTCGGAAGCTGGCGAGCGCGGCCCCTTTGTGAATGCCAATGCGC
GCGCCGGTTTCATCGGCCTTTCCAGCCGCGACCGTTTCCCGGAACTGGTGCGCTCGGTCGTGGAGGGCCTCGGCATGGCA
ACGCGCGATTGCTACGCCGCCATGGGGGAAATGCCCGCCGAACTGCGCATCACCGGTGGTGCTGCGCGCTCGAAGGCGCT
GCGCGGCACGCTTTCGGCGGCGGTCAATGCGCCGGTGCGCGTTTCGGCCCGCGAGGAAGCGGGCGCTGCCGGTGCCGCTA
TGATGGCGGCGGTGGCTATCGGCGCTTATCCGGCCATGGATGATTGCATTGCCGAATGGGTGGAGCCGCTTTTGGGCGCA
AGCGAAGCCCCGGATGCGGCGCGGGCGCACCAATATGAAGAACTTTTCGTTGCCTATCGGGAAGCGCGGCTGGCTCTTGC
GCCAGTCTGGGACAAACTCGCTTCCGGCAAATAA

Upstream 100 bases:

>100_bases
AACATGCACCATCGCCCGATTTCGCCATGGAAGGGGCTGCGAGCGACCTGTTTTCAGTCGCGGGAGGAAATCCGGATGTT
TATGAAAGCCTGTGTCAGCC

Downstream 100 bases:

>100_bases
GGAAACATTGAAATGGCTGAACCGGAAACCTGCGACCTGTTTGTAATTGGCGGCGGCATCAACGGTGCGGGCGTGGCCCG
CGACGCGGCCGGGCGCGGCC

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MREKGDIIIGIDAGTSVLKAVAFDFSGRQIESAAVRNTYVTGDHGAVTQSLAQTWQDCARALRDLGAKLPGLAQRTAAIA
VTGQGDGTWLVGKDNRPVGDAWIWLDARAASTVTRLAAGPMNRARFEATGTGLNTCQQGAQMAHMDTIAPELLDNAKAAL
HCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDDVVIEALGLQKRRNLLPEIIDGSQSQHPLSAEAAAATGLLAGTPVS
LGYVDMAMTALGAGVCGGTAGAGCSTIGSTGVHMRAKPVADIHLNKEGTGYVIALPIPGIVTQVQTNMGATINIDWILQV
AADLMSTPEKPVSLGDLIPRLDDWFNASRPGAILYHPYISEAGERGPFVNANARAGFIGLSSRDRFPELVRSVVEGLGMA
TRDCYAAMGEMPAELRITGGAARSKALRGTLSAAVNAPVRVSAREEAGAAGAAMMAAVAIGAYPAMDDCIAEWVEPLLGA
SEAPDAARAHQYEELFVAYREARLALAPVWDKLASGK

Sequences:

>Translated_517_residues
MREKGDIIIGIDAGTSVLKAVAFDFSGRQIESAAVRNTYVTGDHGAVTQSLAQTWQDCARALRDLGAKLPGLAQRTAAIA
VTGQGDGTWLVGKDNRPVGDAWIWLDARAASTVTRLAAGPMNRARFEATGTGLNTCQQGAQMAHMDTIAPELLDNAKAAL
HCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDDVVIEALGLQKRRNLLPEIIDGSQSQHPLSAEAAAATGLLAGTPVS
LGYVDMAMTALGAGVCGGTAGAGCSTIGSTGVHMRAKPVADIHLNKEGTGYVIALPIPGIVTQVQTNMGATINIDWILQV
AADLMSTPEKPVSLGDLIPRLDDWFNASRPGAILYHPYISEAGERGPFVNANARAGFIGLSSRDRFPELVRSVVEGLGMA
TRDCYAAMGEMPAELRITGGAARSKALRGTLSAAVNAPVRVSAREEAGAAGAAMMAAVAIGAYPAMDDCIAEWVEPLLGA
SEAPDAARAHQYEELFVAYREARLALAPVWDKLASGK
>Mature_517_residues
MREKGDIIIGIDAGTSVLKAVAFDFSGRQIESAAVRNTYVTGDHGAVTQSLAQTWQDCARALRDLGAKLPGLAQRTAAIA
VTGQGDGTWLVGKDNRPVGDAWIWLDARAASTVTRLAAGPMNRARFEATGTGLNTCQQGAQMAHMDTIAPELLDNAKAAL
HCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDDVVIEALGLQKRRNLLPEIIDGSQSQHPLSAEAAAATGLLAGTPVS
LGYVDMAMTALGAGVCGGTAGAGCSTIGSTGVHMRAKPVADIHLNKEGTGYVIALPIPGIVTQVQTNMGATINIDWILQV
AADLMSTPEKPVSLGDLIPRLDDWFNASRPGAILYHPYISEAGERGPFVNANARAGFIGLSSRDRFPELVRSVVEGLGMA
TRDCYAAMGEMPAELRITGGAARSKALRGTLSAAVNAPVRVSAREEAGAAGAAMMAAVAIGAYPAMDDCIAEWVEPLLGA
SEAPDAARAHQYEELFVAYREARLALAPVWDKLASGK

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789987, Length=516, Percent_Identity=28.1007751937984, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1790005, Length=510, Percent_Identity=25.2941176470588, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787789, Length=523, Percent_Identity=25.2390057361377, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 54342; Mature: 54342

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKGDIIIGIDAGTSVLKAVAFDFSGRQIESAAVRNTYVTGDHGAVTQSLAQTWQDCAR
CCCCCCEEEEECCCHHHHHHHHHCCCCCEEHHHHHCCCEEECCCHHHHHHHHHHHHHHHH
ALRDLGAKLPGLAQRTAAIAVTGQGDGTWLVGKDNRPVGDAWIWLDARAASTVTRLAAGP
HHHHHCCCCCCCHHCCEEEEEEECCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHCCC
MNRARFEATGTGLNTCQQGAQMAHMDTIAPELLDNAKAALHCKDWLYLNLTGVRATDPSE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEEECCCCCCCC
ASFTFGNFRTRQYDDVVIEALGLQKRRNLLPEIIDGSQSQHPLSAEAAAATGLLAGTPVS
CCEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
LGYVDMAMTALGAGVCGGTAGAGCSTIGSTGVHMRAKPVADIHLNKEGTGYVIALPIPGI
HHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCH
VTQVQTNMGATINIDWILQVAADLMSTPEKPVSLGDLIPRLDDWFNASRPGAILYHPYIS
HHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHH
EAGERGPFVNANARAGFIGLSSRDRFPELVRSVVEGLGMATRDCYAAMGEMPAELRITGG
CCCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECC
AARSKALRGTLSAAVNAPVRVSAREEAGAAGAAMMAAVAIGAYPAMDDCIAEWVEPLLGA
HHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
SEAPDAARAHQYEELFVAYREARLALAPVWDKLASGK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREKGDIIIGIDAGTSVLKAVAFDFSGRQIESAAVRNTYVTGDHGAVTQSLAQTWQDCAR
CCCCCCEEEEECCCHHHHHHHHHCCCCCEEHHHHHCCCEEECCCHHHHHHHHHHHHHHHH
ALRDLGAKLPGLAQRTAAIAVTGQGDGTWLVGKDNRPVGDAWIWLDARAASTVTRLAAGP
HHHHHCCCCCCCHHCCEEEEEEECCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHCCC
MNRARFEATGTGLNTCQQGAQMAHMDTIAPELLDNAKAALHCKDWLYLNLTGVRATDPSE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEEECCCCCCCC
ASFTFGNFRTRQYDDVVIEALGLQKRRNLLPEIIDGSQSQHPLSAEAAAATGLLAGTPVS
CCEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
LGYVDMAMTALGAGVCGGTAGAGCSTIGSTGVHMRAKPVADIHLNKEGTGYVIALPIPGI
HHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCH
VTQVQTNMGATINIDWILQVAADLMSTPEKPVSLGDLIPRLDDWFNASRPGAILYHPYIS
HHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHH
EAGERGPFVNANARAGFIGLSSRDRFPELVRSVVEGLGMATRDCYAAMGEMPAELRITGG
CCCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECC
AARSKALRGTLSAAVNAPVRVSAREEAGAAGAAMMAAVAIGAYPAMDDCIAEWVEPLLGA
HHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
SEAPDAARAHQYEELFVAYREARLALAPVWDKLASGK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]