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The map label for this gene is nikR [C]

Identifier: 225686572

GI number: 225686572

Start: 767715

End: 768113

Strand: Direct

Name: nikR [C]

Synonym: BMEA_B0784

Alternate gene names: 225686572

Gene position: 767715-768113 (Clockwise)

Preceding gene: 225686566

Following gene: 225686576

Centisome position: 64.76

GC content: 53.13

Gene sequence:

>399_bases
ATGCAGCGGATTACCATAACGATTGACGATGATCTCATGGCGGCGCTGGATCGGATGATCGAGATCAAGGGATATCAAAA
CCGTTCCGAGGCGCTGCGTGATCTTGCCCGAACCGGGTTGCAGCAGGCATCGCTGGAAGAAGGCCAGATGGAAGCCTGTG
TGGGAGTGCTAAGCTACACCTATGATCACAGTGCCCGCGACCTCTCCAAAAAGCTGACCAATACCCATCACGATCATCAC
AACATCTCGGTCGCCAGCATGCATGTGCATCTTGATCATGATCGATGCCTGGAAGTCAGTATCCTCAAGAGCAAAACGGA
CGATGTCAGGCATTTTGCCGATCACGTAAAAGCGGAGAGACACGTTACTCACGGAACGTTGGCCGTCTTGCCGCTCTGA

Upstream 100 bases:

>100_bases
TGATTCAATCAGATCGAAACACGCTCTAAACGGCTGGACAAAATTGCGATCCGAAGCGAGAACAAACACGCATGGACAAT
ATTTGCGCGGAGGTAAGGCT

Downstream 100 bases:

>100_bases
GCGGAAAAACTTACGTCACCGCACCGACCTGCCACGGCACGAACTCGTTATCGCCATAGTCATAAATCTCACTCAGCGTC
TTCTGGCCGGATGCGACCGC

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYTYDHSARDLSKKLTNTHHDHH
NISVASMHVHLDHDRCLEVSILKSKTDDVRHFADHVKAERHVTHGTLAVLPL

Sequences:

>Translated_132_residues
MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYTYDHSARDLSKKLTNTHHDHH
NISVASMHVHLDHDRCLEVSILKSKTDDVRHFADHVKAERHVTHGTLAVLPL
>Mature_132_residues
MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYTYDHSARDLSKKLTNTHHDHH
NISVASMHVHLDHDRCLEVSILKSKTDDVRHFADHVKAERHVTHGTLAVLPL

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

Organism=Escherichia coli, GI1789892, Length=131, Percent_Identity=49.618320610687, Blast_Score=119, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR014160
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 14960; Mature: 14960

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYT
CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHH
YDHSARDLSKKLTNTHHDHHNISVASMHVHLDHDRCLEVSILKSKTDDVRHFADHVKAER
CCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEHHHHHCCCHHHHHHHHHHHHHH
HVTHGTLAVLPL
CCCCCEEEEECC
>Mature Secondary Structure
MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYT
CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHH
YDHSARDLSKKLTNTHHDHHNISVASMHVHLDHDRCLEVSILKSKTDDVRHFADHVKAER
CCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEHHHHHCCCHHHHHHHHHHHHHH
HVTHGTLAVLPL
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA