| Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_012442 |
| Length | 1,185,518 |
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The map label for this gene is fadJ [H]
Identifier: 225686560
GI number: 225686560
Start: 753937
End: 756153
Strand: Reverse
Name: fadJ [H]
Synonym: BMEA_B0772
Alternate gene names: 225686560
Gene position: 756153-753937 (Counterclockwise)
Preceding gene: 225686561
Following gene: 225686559
Centisome position: 63.78
GC content: 57.92
Gene sequence:
>2217_bases ATGGCTTATGTAAATTTCAAGGTTGAAACCGACGCCGACGGCATTGCTCTCGTTACATGGGACATGCCCGAAAAGTCGAT GAATGTCTTCACCGTCGATGCGATGCAGGAACTGAATGCAATCATCGATGCGGTGATAGCTGACGACAAGATCAAGGGTG TTGTCATCACCTCCGGCAAGGAAACCTTCTCCGGCGGTGCCGACCTGACCATGCTGGAAGGCATGTTCAAGGAATTCCAG AAGCAGAAGGTCAAGGACCCCGAAGGCGCGGTCCAGACCCTGTTCGACAATGTCGGCAAGATGAGCGGCCTGTTCCGTAA GCTTGAAACCTGCGGCAAACCGTGGGTTTCGGCCATCAACGGCACCTGCATGGGCGGCGCATTTGAAATGTCGCTCGCCT GCCATGCGCGTGCGGCGTCCGATGCGCCGGGCGTGAAGATGGCCCTGCCGGAAGTGAAGGTCGGCCTTTTCCCCGGTGCT GGCGGCACGCAGCGCGTTCCGCGCCTTGCCAACCAGCAGGACGCGCTTCAGATGATGACGACGGGTTCAAGCCTCACCGC GCAGCGCGCCAAGGCTATGGGCCTTGTCACCGAGATTGCTCCGGCCAAGAAGCTGGTCGAAACAGCCAAGAAGCTCATCA AGGGTGGCCTCAAGCCGGTTCAGCCCTGGGATGAAAAGGGCTTCAAGCTGCCGGGCGGCGCGATTTATTCGGCTGCCGGT GCAAACCTCTGGCCTGCCGCGACCGCCATCCTGCGTCGCGAAACATCGGGTAATTATCCGGCGGCACTCGCCATTTTGAA GTCGGTTTATGAGGGCCTTCTGGTGCCTTTCGACACCGGCCTCAAGATTGAACAGCGCTATTTCACCGAAATCCTCCAGA CGACCGAAGCGGGCATGATGATCCGCTCGCTCTTCGTGTCGTTGCAGGAGTTGAACAAGGGTGCGCGCCGTCCGGTTGAC GAAAAGCCGACCAGGCTCAAGAAGATCGGCGTCATCGGCGCGGGCTTCATGGGTGCAGGCATTGCCTATGTGACGGCGAA GGCCGGTATTCCGGTCGTGCTGATCGACCGCGATCAGGAATCTGCCGACAAGGGCAAGGCCCACACGGCAGACCTAATCA CCAAGGAAATGCAGAAGGGCCGTGCCACCGAGGCCGACAAGGAAAAACTTCTGTCGCTCATCACAGCAACGCCGGATTAT GCCCAGCTTGAAGGTGCTGATCTGGTGATTGAAGCCGTGTTCGAGGACCGCGAAGTCAAGCGCGTTGCGACCGAGAAGGC CGAGGAAGTGCTGAAATCTTCCGCAGTCTTCGCCTCCAACACCTCGACCCTGCCGATCACCGGTCTTGCCAAAGTGTCGA AGCGTCCGAAGAATTTTATCGGCATCCACTTCTTCTCGCCTGTCGACAAGATGATGCTGGTGGAAGTGATCCTCGGCAAG AAGACCTCTGACAAGGCATTGGCCGTAGCACTCGATTATGTCCGTGCGATCAAGAAGACGCCGATCGTCGTCAACGATAC GCGCGGCTTCTACGTCAACCGTTGCGTGCTGCGCTATATGTCGGAAGCCTACAACATGCTTGTTGAAGGCGTCCCGGCGG CGATGATCGAAAATGCCGCCCGCATGGCCGGTATGCCGGTCGGCCCGCTTGCGCTCAACGACGAAACGGCCATCGACCTG TCGCAGAAGATCCTGAAAGCCACGCTTGCCGATCTTGGTCCGAAGGCCGTTGACCCGCGCCATGTGGAATTGGTGGACAA GCTTGTCAACGAGTTCGACCGCAAGGGCCGCAAGAATGGCAAGGGCTTCTACGATTATCCGGCAAAGCCTGCCAAGAAGC ATTTGTGGCCGGGTCTGAAAGACCTCTATCCGCAGCAGAACCCGGACACGATCGATGTGAAGGAGCTTAAAGAGCGCTTC CTCGTCACCATCGCTCTGGAAGCTGCCCGCGTGATGGAAGAAGGCATTGTGACCGATCCGCGTGAAGCCGATGTCGGCTC CATCCTCGCCTTCGGTTTCGCGCCTTATACGGGCGGCACGCTCTCCTATATCGACGGTATGGGCGCGAAGAAATTCGTCC AGCTCGCCAAGGATTTGCAGAAGAAATATGGCGCACAGTTCAAGGCGCCGAAGCTTCTGCTCGATATGGCCGAGAACGGC GAAACCTTCTACCAGCGTTTCAATCCCTATAAGGGCGAAACGAAAAAAGCAGCCTGA
Upstream 100 bases:
>100_bases GGAACGCCGCAATCTCAATACCGCTCTGGTGACGCTGTGCATCGGTTCCGGTATGGGCACGGCCACGATCATCGAGCGCG TGTAAGGGGAGGTTCAGACA
Downstream 100 bases:
>100_bases CCGGCGGCTCCACCAACCCATCAAGCGCGGCGTATCTCACGCCGCGCTTTTTTTGTTGCTCATCATAAATAAGAAAATTT TCCCTGACAATTTACCTATC
Product: Fatty acid oxidation complex subunit alpha
Products: NA
Alternate protein names: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase [H]
Number of amino acids: Translated: 738; Mature: 737
Protein sequence:
>738_residues MAYVNFKVETDADGIALVTWDMPEKSMNVFTVDAMQELNAIIDAVIADDKIKGVVITSGKETFSGGADLTMLEGMFKEFQ KQKVKDPEGAVQTLFDNVGKMSGLFRKLETCGKPWVSAINGTCMGGAFEMSLACHARAASDAPGVKMALPEVKVGLFPGA GGTQRVPRLANQQDALQMMTTGSSLTAQRAKAMGLVTEIAPAKKLVETAKKLIKGGLKPVQPWDEKGFKLPGGAIYSAAG ANLWPAATAILRRETSGNYPAALAILKSVYEGLLVPFDTGLKIEQRYFTEILQTTEAGMMIRSLFVSLQELNKGARRPVD EKPTRLKKIGVIGAGFMGAGIAYVTAKAGIPVVLIDRDQESADKGKAHTADLITKEMQKGRATEADKEKLLSLITATPDY AQLEGADLVIEAVFEDREVKRVATEKAEEVLKSSAVFASNTSTLPITGLAKVSKRPKNFIGIHFFSPVDKMMLVEVILGK KTSDKALAVALDYVRAIKKTPIVVNDTRGFYVNRCVLRYMSEAYNMLVEGVPAAMIENAARMAGMPVGPLALNDETAIDL SQKILKATLADLGPKAVDPRHVELVDKLVNEFDRKGRKNGKGFYDYPAKPAKKHLWPGLKDLYPQQNPDTIDVKELKERF LVTIALEAARVMEEGIVTDPREADVGSILAFGFAPYTGGTLSYIDGMGAKKFVQLAKDLQKKYGAQFKAPKLLLDMAENG ETFYQRFNPYKGETKKAA
Sequences:
>Translated_738_residues MAYVNFKVETDADGIALVTWDMPEKSMNVFTVDAMQELNAIIDAVIADDKIKGVVITSGKETFSGGADLTMLEGMFKEFQ KQKVKDPEGAVQTLFDNVGKMSGLFRKLETCGKPWVSAINGTCMGGAFEMSLACHARAASDAPGVKMALPEVKVGLFPGA GGTQRVPRLANQQDALQMMTTGSSLTAQRAKAMGLVTEIAPAKKLVETAKKLIKGGLKPVQPWDEKGFKLPGGAIYSAAG ANLWPAATAILRRETSGNYPAALAILKSVYEGLLVPFDTGLKIEQRYFTEILQTTEAGMMIRSLFVSLQELNKGARRPVD EKPTRLKKIGVIGAGFMGAGIAYVTAKAGIPVVLIDRDQESADKGKAHTADLITKEMQKGRATEADKEKLLSLITATPDY AQLEGADLVIEAVFEDREVKRVATEKAEEVLKSSAVFASNTSTLPITGLAKVSKRPKNFIGIHFFSPVDKMMLVEVILGK KTSDKALAVALDYVRAIKKTPIVVNDTRGFYVNRCVLRYMSEAYNMLVEGVPAAMIENAARMAGMPVGPLALNDETAIDL SQKILKATLADLGPKAVDPRHVELVDKLVNEFDRKGRKNGKGFYDYPAKPAKKHLWPGLKDLYPQQNPDTIDVKELKERF LVTIALEAARVMEEGIVTDPREADVGSILAFGFAPYTGGTLSYIDGMGAKKFVQLAKDLQKKYGAQFKAPKLLLDMAENG ETFYQRFNPYKGETKKAA >Mature_737_residues AYVNFKVETDADGIALVTWDMPEKSMNVFTVDAMQELNAIIDAVIADDKIKGVVITSGKETFSGGADLTMLEGMFKEFQK QKVKDPEGAVQTLFDNVGKMSGLFRKLETCGKPWVSAINGTCMGGAFEMSLACHARAASDAPGVKMALPEVKVGLFPGAG GTQRVPRLANQQDALQMMTTGSSLTAQRAKAMGLVTEIAPAKKLVETAKKLIKGGLKPVQPWDEKGFKLPGGAIYSAAGA NLWPAATAILRRETSGNYPAALAILKSVYEGLLVPFDTGLKIEQRYFTEILQTTEAGMMIRSLFVSLQELNKGARRPVDE KPTRLKKIGVIGAGFMGAGIAYVTAKAGIPVVLIDRDQESADKGKAHTADLITKEMQKGRATEADKEKLLSLITATPDYA QLEGADLVIEAVFEDREVKRVATEKAEEVLKSSAVFASNTSTLPITGLAKVSKRPKNFIGIHFFSPVDKMMLVEVILGKK TSDKALAVALDYVRAIKKTPIVVNDTRGFYVNRCVLRYMSEAYNMLVEGVPAAMIENAARMAGMPVGPLALNDETAIDLS QKILKATLADLGPKAVDPRHVELVDKLVNEFDRKGRKNGKGFYDYPAKPAKKHLWPGLKDLYPQQNPDTIDVKELKERFL VTIALEAARVMEEGIVTDPREADVGSILAFGFAPYTGGTLSYIDGMGAKKFVQLAKDLQKKYGAQFKAPKLLLDMAENGE TFYQRFNPYKGETKKAA
Specific function: Catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities [H]
COG id: COG1250
COG function: function code I; 3-hydroxyacyl-CoA dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the central section; belongs to the 3-hydroxyacyl- CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=755, Percent_Identity=33.112582781457, Blast_Score=357, Evalue=2e-98, Organism=Homo sapiens, GI68989263, Length=729, Percent_Identity=28.2578875171468, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI261878539, Length=618, Percent_Identity=29.4498381877023, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI296179429, Length=291, Percent_Identity=36.0824742268041, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI296179427, Length=308, Percent_Identity=34.0909090909091, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI194097323, Length=195, Percent_Identity=31.2820512820513, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI70995211, Length=210, Percent_Identity=27.6190476190476, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1788682, Length=724, Percent_Identity=35.4972375690608, Blast_Score=403, Evalue=1e-113, Organism=Escherichia coli, GI1790281, Length=735, Percent_Identity=31.156462585034, Blast_Score=322, Evalue=5e-89, Organism=Escherichia coli, GI1787661, Length=287, Percent_Identity=33.1010452961672, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1787659, Length=198, Percent_Identity=31.3131313131313, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI221142681, Length=166, Percent_Identity=28.3132530120482, Blast_Score=66, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17558304, Length=759, Percent_Identity=32.9380764163373, Blast_Score=356, Evalue=2e-98, Organism=Caenorhabditis elegans, GI17508953, Length=756, Percent_Identity=33.2010582010582, Blast_Score=345, Evalue=4e-95, Organism=Caenorhabditis elegans, GI17508951, Length=756, Percent_Identity=33.2010582010582, Blast_Score=345, Evalue=5e-95, Organism=Caenorhabditis elegans, GI25144276, Length=631, Percent_Identity=34.5483359746434, Blast_Score=303, Evalue=3e-82, Organism=Caenorhabditis elegans, GI71985923, Length=377, Percent_Identity=29.973474801061, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71985930, Length=365, Percent_Identity=27.3972602739726, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17549919, Length=294, Percent_Identity=32.6530612244898, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17553560, Length=290, Percent_Identity=33.1034482758621, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17563036, Length=300, Percent_Identity=32.3333333333333, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17554946, Length=202, Percent_Identity=30.1980198019802, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25145438, Length=196, Percent_Identity=30.6122448979592, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17540714, Length=208, Percent_Identity=30.2884615384615, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536985, Length=176, Percent_Identity=25.5681818181818, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583077, Length=747, Percent_Identity=31.8607764390897, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24583079, Length=747, Percent_Identity=31.8607764390897, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI19921000, Length=747, Percent_Identity=31.8607764390897, Blast_Score=306, Evalue=4e-83, Organism=Drosophila melanogaster, GI20129971, Length=210, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=5e-20, Organism=Drosophila melanogaster, GI24653477, Length=210, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=5e-20, Organism=Drosophila melanogaster, GI24653139, Length=188, Percent_Identity=31.3829787234043, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006176 - InterPro: IPR006108 - InterPro: IPR008927 - InterPro: IPR001753 - InterPro: IPR013328 - InterPro: IPR012802 - InterPro: IPR016040 [H]
Pfam domain/function: PF00725 3HCDH; PF02737 3HCDH_N; PF00378 ECH [H]
EC number: =4.2.1.17; =5.1.2.3; =1.1.1.35 [H]
Molecular weight: Translated: 80171; Mature: 80040
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYVNFKVETDADGIALVTWDMPEKSMNVFTVDAMQELNAIIDAVIADDKIKGVVITSGK CEEEEEEEECCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCC ETFSGGADLTMLEGMFKEFQKQKVKDPEGAVQTLFDNVGKMSGLFRKLETCGKPWVSAIN CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC GTCMGGAFEMSLACHARAASDAPGVKMALPEVKVGLFPGAGGTQRVPRLANQQDALQMMT CCCCCCHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHCCHHHHHHHHH TGSSLTAQRAKAMGLVTEIAPAKKLVETAKKLIKGGLKPVQPWDEKGFKLPGGAIYSAAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCC ANLWPAATAILRRETSGNYPAALAILKSVYEGLLVPFDTGLKIEQRYFTEILQTTEAGMM CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHH IRSLFVSLQELNKGARRPVDEKPTRLKKIGVIGAGFMGAGIAYVTAKAGIPVVLIDRDQE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEECCHHHCCHHEEEECCCCCEEEEECCCC SADKGKAHTADLITKEMQKGRATEADKEKLLSLITATPDYAQLEGADLVIEAVFEDREVK CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHH RVATEKAEEVLKSSAVFASNTSTLPITGLAKVSKRPKNFIGIHFFSPVDKMMLVEVILGK HHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCC KTSDKALAVALDYVRAIKKTPIVVNDTRGFYVNRCVLRYMSEAYNMLVEGVPAAMIENAA CCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RMAGMPVGPLALNDETAIDLSQKILKATLADLGPKAVDPRHVELVDKLVNEFDRKGRKNG HHCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC KGFYDYPAKPAKKHLWPGLKDLYPQQNPDTIDVKELKERFLVTIALEAARVMEEGIVTDP CCCCCCCCCCHHHHCCCCHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCC READVGSILAFGFAPYTGGTLSYIDGMGAKKFVQLAKDLQKKYGAQFKAPKLLLDMAENG CCCCHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC ETFYQRFNPYKGETKKAA HHHHHHCCCCCCCCCCCC >Mature Secondary Structure AYVNFKVETDADGIALVTWDMPEKSMNVFTVDAMQELNAIIDAVIADDKIKGVVITSGK EEEEEEEECCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCC ETFSGGADLTMLEGMFKEFQKQKVKDPEGAVQTLFDNVGKMSGLFRKLETCGKPWVSAIN CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC GTCMGGAFEMSLACHARAASDAPGVKMALPEVKVGLFPGAGGTQRVPRLANQQDALQMMT CCCCCCHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHCCHHHHHHHHH TGSSLTAQRAKAMGLVTEIAPAKKLVETAKKLIKGGLKPVQPWDEKGFKLPGGAIYSAAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCC ANLWPAATAILRRETSGNYPAALAILKSVYEGLLVPFDTGLKIEQRYFTEILQTTEAGMM CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHH IRSLFVSLQELNKGARRPVDEKPTRLKKIGVIGAGFMGAGIAYVTAKAGIPVVLIDRDQE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEECCHHHCCHHEEEECCCCCEEEEECCCC SADKGKAHTADLITKEMQKGRATEADKEKLLSLITATPDYAQLEGADLVIEAVFEDREVK CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHH RVATEKAEEVLKSSAVFASNTSTLPITGLAKVSKRPKNFIGIHFFSPVDKMMLVEVILGK HHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCC KTSDKALAVALDYVRAIKKTPIVVNDTRGFYVNRCVLRYMSEAYNMLVEGVPAAMIENAA CCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RMAGMPVGPLALNDETAIDLSQKILKATLADLGPKAVDPRHVELVDKLVNEFDRKGRKNG HHCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC KGFYDYPAKPAKKHLWPGLKDLYPQQNPDTIDVKELKERFLVTIALEAARVMEEGIVTDP CCCCCCCCCCHHHHCCCCHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCC READVGSILAFGFAPYTGGTLSYIDGMGAKKFVQLAKDLQKKYGAQFKAPKLLLDMAENG CCCCHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC ETFYQRFNPYKGETKKAA HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA