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The map label for this gene is ycjN [C]

Identifier: 225686517

GI number: 225686517

Start: 709115

End: 710350

Strand: Direct

Name: ycjN [C]

Synonym: BMEA_B0725

Alternate gene names: 225686517

Gene position: 709115-710350 (Clockwise)

Preceding gene: 225686507

Following gene: 225686518

Centisome position: 59.81

GC content: 54.69

Gene sequence:

>1236_bases
ATGTTGATCAGAAAATGGAAGGCCGGCCTTTTGGCCGGATTGAGCATTCTGGCGCTGGCGTCCAGCGCGGATGCAGGTGA
AGCGCGCATGACGGTTGCGGAATACAGCGCCAAGACCGGCCCTTATTTTGAAGAGGTGAAGAAGGCTTTCGAGGCTGAAA
ATCCCGGCATCACGCTCAATTTTGAAGTTGTTCCATGGGATGTGCTCCTGCAAAAGCTGACCACCGATATTTCGGCTGGC
ACCAATGCCGATCTTTCAATCATCGGCACACGCTGGCTGATCGATTTCGTGCAGCAGGGCATTGCCGAGCCGCTCGATGG
CTATATGAACGACGAATTCAAGGGCCGCTTCATTGAAACTTTCCTTTCGCCCTCGGTGCTTGACGGCAAGACCTATGGCC
TGCCAATCGCAGCTTCCGTCCGTGCGATGTATTATAATAAGGATCTGTTCGAGAAAGCCGGCATTAAAAACCCGCCTGCG
AACTGGGATGAACTGAAAGCCGACGCCGCCAAGATCAAGGCGCTCGGCGGTGAAAATTACGGTTTCGGCCTGCAGGGCAA
GGAAATCGAGACCGACGTTTACTATTATTACGCCATGTGGTCCTACGGGACGGAAATCCTGAACAAGGATGGTACCTCCG
GCCTCAGCACACCGGGTGCGCTGGAAGCGGCCAAGCTCTATAAATCCATGATCGACGACGGGCTAACGCAGCCCGGCGTT
ACCTCCTATGCGCGTGAGGATGTGCAGAACCTCTTCAAGCAGGGCAAGGTTGGCATGATGATAACCGCGCCGTTCCTGTC
CAACCAGATCAAGGAAGAAGCGCCCAATCTCAAATATGGCGTCGCCGCTATTCCTGCTGGCCCCACCGGTGCACGCGGGA
CTTATGGCGTGACCGATTCCGTCATCATGTTCCAGAATTCCAAGAACAAGGAGGAAGCCTGGAAGGTGCTCGACTTCCTG
TTCCAGAAGGACTGGCGCGCGAAATTCACGCAGAACGAAGGCTTCCTTCCGGTCAACAAGGAAGAGGCGAAGATGGATTA
TTATGTCAATAATGCCGATCTTGCCGCCTTTACCGCTCTTCTGCCGGATGCGCGTTTTGCTCCCGTCATTCCGGGCTGGG
AAGAAATTGCCGACATCACCTCCAATGCCATGCAGAGCATCTATCTCGGCAAGGGCGAACCGGATGCCGTCCTGAAAGAT
GCCGCTGCCAAGGCAGACGCCATCTTGAAGAAATAG

Upstream 100 bases:

>100_bases
ATGTTTTCGCTTGAAACCCAGATAAAAAACGATAATGTAAGAAAATAACAAAAAATATATGCCTCTTGCGTACCGAGAGA
AACAACAAGGGAACCGGAAA

Downstream 100 bases:

>100_bases
CTTCTCCCCCGCCTGCCCGGCAGCTTTGCCCCCACCTGCTGCCGGCCTTTTTTCCGGGACAATGACAGCCAATGCAAAAT
CGCACCTTGCCCTATTTCCT

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MLIRKWKAGLLAGLSILALASSADAGEARMTVAEYSAKTGPYFEEVKKAFEAENPGITLNFEVVPWDVLLQKLTTDISAG
TNADLSIIGTRWLIDFVQQGIAEPLDGYMNDEFKGRFIETFLSPSVLDGKTYGLPIAASVRAMYYNKDLFEKAGIKNPPA
NWDELKADAAKIKALGGENYGFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLYKSMIDDGLTQPGV
TSYAREDVQNLFKQGKVGMMITAPFLSNQIKEEAPNLKYGVAAIPAGPTGARGTYGVTDSVIMFQNSKNKEEAWKVLDFL
FQKDWRAKFTQNEGFLPVNKEEAKMDYYVNNADLAAFTALLPDARFAPVIPGWEEIADITSNAMQSIYLGKGEPDAVLKD
AAAKADAILKK

Sequences:

>Translated_411_residues
MLIRKWKAGLLAGLSILALASSADAGEARMTVAEYSAKTGPYFEEVKKAFEAENPGITLNFEVVPWDVLLQKLTTDISAG
TNADLSIIGTRWLIDFVQQGIAEPLDGYMNDEFKGRFIETFLSPSVLDGKTYGLPIAASVRAMYYNKDLFEKAGIKNPPA
NWDELKADAAKIKALGGENYGFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLYKSMIDDGLTQPGV
TSYAREDVQNLFKQGKVGMMITAPFLSNQIKEEAPNLKYGVAAIPAGPTGARGTYGVTDSVIMFQNSKNKEEAWKVLDFL
FQKDWRAKFTQNEGFLPVNKEEAKMDYYVNNADLAAFTALLPDARFAPVIPGWEEIADITSNAMQSIYLGKGEPDAVLKD
AAAKADAILKK
>Mature_411_residues
MLIRKWKAGLLAGLSILALASSADAGEARMTVAEYSAKTGPYFEEVKKAFEAENPGITLNFEVVPWDVLLQKLTTDISAG
TNADLSIIGTRWLIDFVQQGIAEPLDGYMNDEFKGRFIETFLSPSVLDGKTYGLPIAASVRAMYYNKDLFEKAGIKNPPA
NWDELKADAAKIKALGGENYGFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLYKSMIDDGLTQPGV
TSYAREDVQNLFKQGKVGMMITAPFLSNQIKEEAPNLKYGVAAIPAGPTGARGTYGVTDSVIMFQNSKNKEEAWKVLDFL
FQKDWRAKFTQNEGFLPVNKEEAKMDYYVNNADLAAFTALLPDARFAPVIPGWEEIADITSNAMQSIYLGKGEPDAVLKD
AAAKADAILKK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=392, Percent_Identity=24.4897959183673, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789862, Length=322, Percent_Identity=25.776397515528, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45009; Mature: 45009

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRKWKAGLLAGLSILALASSADAGEARMTVAEYSAKTGPYFEEVKKAFEAENPGITLN
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCCCCCHHHHHHHHHCCCCCCEEEE
FEVVPWDVLLQKLTTDISAGTNADLSIIGTRWLIDFVQQGIAEPLDGYMNDEFKGRFIET
EEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FLSPSVLDGKTYGLPIAASVRAMYYNKDLFEKAGIKNPPANWDELKADAAKIKALGGENY
HCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLYKSMIDDGLTQPGV
CCCCCCCEECCEEEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
TSYAREDVQNLFKQGKVGMMITAPFLSNQIKEEAPNLKYGVAAIPAGPTGARGTYGVTDS
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEECEEEECCCCCCCCCCCCCCCC
VIMFQNSKNKEEAWKVLDFLFQKDWRAKFTQNEGFLPVNKEEAKMDYYVNNADLAAFTAL
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHH
LPDARFAPVIPGWEEIADITSNAMQSIYLGKGEPDAVLKDAAAKADAILKK
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIRKWKAGLLAGLSILALASSADAGEARMTVAEYSAKTGPYFEEVKKAFEAENPGITLN
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCCCCCHHHHHHHHHCCCCCCEEEE
FEVVPWDVLLQKLTTDISAGTNADLSIIGTRWLIDFVQQGIAEPLDGYMNDEFKGRFIET
EEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FLSPSVLDGKTYGLPIAASVRAMYYNKDLFEKAGIKNPPANWDELKADAAKIKALGGENY
HCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLYKSMIDDGLTQPGV
CCCCCCCEECCEEEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
TSYAREDVQNLFKQGKVGMMITAPFLSNQIKEEAPNLKYGVAAIPAGPTGARGTYGVTDS
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEECEEEECCCCCCCCCCCCCCCC
VIMFQNSKNKEEAWKVLDFLFQKDWRAKFTQNEGFLPVNKEEAKMDYYVNNADLAAFTAL
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHH
LPDARFAPVIPGWEEIADITSNAMQSIYLGKGEPDAVLKDAAAKADAILKK
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA