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The map label for this gene is ycjO [C]

Identifier: 225686518

GI number: 225686518

Start: 710422

End: 711291

Strand: Direct

Name: ycjO [C]

Synonym: BMEA_B0726

Alternate gene names: 225686518

Gene position: 710422-711291 (Clockwise)

Preceding gene: 225686517

Following gene: 225686519

Centisome position: 59.93

GC content: 56.09

Gene sequence:

>870_bases
ATGCAAAATCGCACCTTGCCCTATTTCCTCATCCTGCCGAGCCTGCTTCTGGCTGCGGTGGTGATATTCTGGCCTGTGGT
GCATTTGTTTGAAATCGCCACGCATGATGTGAACCGTTTCGGCCAGTTGCGCGAATTCAACGATGGCGCCAATTTCACGG
CCCTTTTCGCAACGGCGGAGTTCATGAATGCGCTGTGGCGCACTGCCGTCTGGACTGTTGCCGTGGTGGGCGGCGCACTG
GTCCTTTCAATCCCCGTCGCCATCATTCTCAATATGGATTTCTACGGCCGCTCGGTCGCGCGCGTCATCATCATGCTGCC
ATGGGCGGTTTCGCTCACCATGACGGCCATCGTCTGGCGCTGGGCACTGAATGGCGAAAGCGGAATGCTCAATTCCGCCC
TGCACGGCCTTGGCCTCATCGACACGAATATCCAGTGGCTTGCAAGCGCCGCAACGGCCTTTCCGATGCAGATACTCGTC
GGCATTCTGGTGACGGTTCCCTTCACCACAACGATCTTTCTGGCTGGCTTATCCTCCATTCCCGACGACCTCTACGAAGC
CTCATCGCTTGAAGGCGCTAGCCTCTGGCAGCAGTTTCGCGAGATCACCTTCCCGCTGTTGAAGCCTTTCGTAAATATCG
CCATCGTGCTCAACACGATCTATGTCTTCAACTCCTTCCCGATCATCTGGGTGATGACACAGGGTAGACCGGCCAATTCC
ACCGACATTCTGGTGACGCATCTCTACAAGCTCGCCTTTCGCCTGGGCAAACTTGGCGAAGCTTCCGCCGTCTCCCTCAT
CATGCTCGCCATATTGCTGGTCTTCACCGTCATTTACATCCGGATTTCCACGCGGAGCGAACAATCATGA

Upstream 100 bases:

>100_bases
CCAAGGCAGACGCCATCTTGAAGAAATAGCTTCTCCCCCGCCTGCCCGGCAGCTTTGCCCCCACCTGCTGCCGGCCTTTT
TTCCGGGACAATGACAGCCA

Downstream 100 bases:

>100_bases
TGTCTGCGAAGCTCAAGCGCACGGTGGTCGCATGGGCGGTTCTTTCGCCGCTCATCGTGCTGACCCTGTTTCCCTTCGCC
GTTATGTTCCTGACGGCGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQNRTLPYFLILPSLLLAAVVIFWPVVHLFEIATHDVNRFGQLREFNDGANFTALFATAEFMNALWRTAVWTVAVVGGAL
VLSIPVAIILNMDFYGRSVARVIIMLPWAVSLTMTAIVWRWALNGESGMLNSALHGLGLIDTNIQWLASAATAFPMQILV
GILVTVPFTTTIFLAGLSSIPDDLYEASSLEGASLWQQFREITFPLLKPFVNIAIVLNTIYVFNSFPIIWVMTQGRPANS
TDILVTHLYKLAFRLGKLGEASAVSLIMLAILLVFTVIYIRISTRSEQS

Sequences:

>Translated_289_residues
MQNRTLPYFLILPSLLLAAVVIFWPVVHLFEIATHDVNRFGQLREFNDGANFTALFATAEFMNALWRTAVWTVAVVGGAL
VLSIPVAIILNMDFYGRSVARVIIMLPWAVSLTMTAIVWRWALNGESGMLNSALHGLGLIDTNIQWLASAATAFPMQILV
GILVTVPFTTTIFLAGLSSIPDDLYEASSLEGASLWQQFREITFPLLKPFVNIAIVLNTIYVFNSFPIIWVMTQGRPANS
TDILVTHLYKLAFRLGKLGEASAVSLIMLAILLVFTVIYIRISTRSEQS
>Mature_289_residues
MQNRTLPYFLILPSLLLAAVVIFWPVVHLFEIATHDVNRFGQLREFNDGANFTALFATAEFMNALWRTAVWTVAVVGGAL
VLSIPVAIILNMDFYGRSVARVIIMLPWAVSLTMTAIVWRWALNGESGMLNSALHGLGLIDTNIQWLASAATAFPMQILV
GILVTVPFTTTIFLAGLSSIPDDLYEASSLEGASLWQQFREITFPLLKPFVNIAIVLNTIYVFNSFPIIWVMTQGRPANS
TDILVTHLYKLAFRLGKLGEASAVSLIMLAILLVFTVIYIRISTRSEQS

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=29.9610894941634, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1789861, Length=282, Percent_Identity=25.886524822695, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=29.8804780876494, Blast_Score=97, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32024; Mature: 32024

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRTLPYFLILPSLLLAAVVIFWPVVHLFEIATHDVNRFGQLREFNDGANFTALFATAE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FMNALWRTAVWTVAVVGGALVLSIPVAIILNMDFYGRSVARVIIMLPWAVSLTMTAIVWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WALNGESGMLNSALHGLGLIDTNIQWLASAATAFPMQILVGILVTVPFTTTIFLAGLSSI
HHCCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDDLYEASSLEGASLWQQFREITFPLLKPFVNIAIVLNTIYVFNSFPIIWVMTQGRPANS
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
TDILVTHLYKLAFRLGKLGEASAVSLIMLAILLVFTVIYIRISTRSEQS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MQNRTLPYFLILPSLLLAAVVIFWPVVHLFEIATHDVNRFGQLREFNDGANFTALFATAE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FMNALWRTAVWTVAVVGGALVLSIPVAIILNMDFYGRSVARVIIMLPWAVSLTMTAIVWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WALNGESGMLNSALHGLGLIDTNIQWLASAATAFPMQILVGILVTVPFTTTIFLAGLSSI
HHCCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDDLYEASSLEGASLWQQFREITFPLLKPFVNIAIVLNTIYVFNSFPIIWVMTQGRPANS
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
TDILVTHLYKLAFRLGKLGEASAVSLIMLAILLVFTVIYIRISTRSEQS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA