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The map label for this gene is ugpB [H]

Identifier: 225686433

GI number: 225686433

Start: 615697

End: 616998

Strand: Direct

Name: ugpB [H]

Synonym: BMEA_B0628

Alternate gene names: 225686433

Gene position: 615697-616998 (Clockwise)

Preceding gene: 225686432

Following gene: 225686434

Centisome position: 51.93

GC content: 56.45

Gene sequence:

>1302_bases
ATGTTCACCCGTCTGATCACGACTTCCGCGCTCACGGGAGCTATCGCGCTCACCATCGGTTCTCAGGCTTTTGCCCAGAC
GGAACTGGCATGGTGGCACGGCATGACCGGCGCCAACAACGAAATGGTCAATGAGCTCTCCAAGGAGTTCAACGAAAGCC
AGAGCGAATACAAGATCGTTCCGGTTTACAAGGGCAACTATCCTGAAACGTTGAACGCGGGCATCGCCGCATTCCGTTCC
AAGCAGCCGCCAGCAATCCTTCAGGTTTTCGACGCTGGCAGCGGCGTGATGATGGCAGCCGAAGGCGCCATAGTTCCGGC
TGCCGAAGTGCTCGAAAAGGGTGGCTACAAGTTCGACAAGTCGCAATATCTGCCGGGTATCGTGGCTTATTATTCCAAGC
CGGACGGCACCATGTTGTCCTTCCCCTACAATTCCTCTTCGCCAATCCTCTATTACAACAAGGACGCCTTCAAGAAGGCC
GGCCTTGATGAAAACAAGCCGCCGAAGACCTGGCCGGAAGTTTTTGAAGCCGCCAAAAAGATCAAGGCAAGCGGCGCATC
GCCTTGTGGTTTCACCTCCACCTGGCTGACCTGGATCCAGACCGAAAACTTCGCCGCCTGGAACAATGTGCCCTATGGCA
CGAATGAAAATGGCCTCGCCGGGACCGACGTGAAGCTCGAAATCAATTCGCCGCTTTATGTCGAGCACTTCCAGGCTATC
GCCGATCTCGCCAAGGATGGCACGTTCCGTTATGGCGGCCGCACGTCCGAGGCAAAGCAGCTCTTCACCTCCGGCGAATG
CGCCATGCTGACGGAATCCTCCGGCGGCCTGGGCGATGTCGTGAAGTCGGGCATCAATTACGGCATCGGCCAGTTGCCTT
ATTATGAAGGCCATGGCCCGCAGAACACAATTCCGGGCGGCGCTTCGCTCTGGGTATTCGCCGGCCTCAGCGACGACCAG
TACAAAGGCATCGCGGAATTCTTCAATTTCCTCTCGCAGACCAAGATTCAGGTCAAGCTGCATGAAAAATCCGGCTATCT
GCCGGTGACGCTTGCAGCCTATGAGGAAACCAAGAAGTCGGATTTCTATGAAAAGAATCCGGGCCGCGAAACGCCGATCC
TGCAAATGATGGGCAAGGAGCCGACGGAAAATTCCAAGGGTGTGCGCCTCGTCAACCTGCCGCAGGTTCGCGACATTCTG
AATGAAGAGTTTGAAGCCATGCTGGGCGGCAAACAGGACGCGAAGACCGCACTCGACAACGCCGTCAAGCGCGGCAACGC
AGCAATCGCCGCAGCTCAATAA

Upstream 100 bases:

>100_bases
ATGCATTCATATAAATGCGATCAATATATTGGAGATGTCGGGACGCTAAAGATCCAGAGGAGCTTTAATGTTCACGCAAT
CATACGTCCGAGGAGGAAAC

Downstream 100 bases:

>100_bases
TCCATCATATCGAGACAATGCCGCCAACCCTTTCCGGGGTTGGCGACATTGCTGCTCACGAGGAAGCTTCCCGTGCAGAA
AGTAACCTTTCCGAATAAGA

Product: sn-glycerol-3-phosphate-binding periplasmic protein UgpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MFTRLITTSALTGAIALTIGSQAFAQTELAWWHGMTGANNEMVNELSKEFNESQSEYKIVPVYKGNYPETLNAGIAAFRS
KQPPAILQVFDAGSGVMMAAEGAIVPAAEVLEKGGYKFDKSQYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDAFKKA
GLDENKPPKTWPEVFEAAKKIKASGASPCGFTSTWLTWIQTENFAAWNNVPYGTNENGLAGTDVKLEINSPLYVEHFQAI
ADLAKDGTFRYGGRTSEAKQLFTSGECAMLTESSGGLGDVVKSGINYGIGQLPYYEGHGPQNTIPGGASLWVFAGLSDDQ
YKGIAEFFNFLSQTKIQVKLHEKSGYLPVTLAAYEETKKSDFYEKNPGRETPILQMMGKEPTENSKGVRLVNLPQVRDIL
NEEFEAMLGGKQDAKTALDNAVKRGNAAIAAAQ

Sequences:

>Translated_433_residues
MFTRLITTSALTGAIALTIGSQAFAQTELAWWHGMTGANNEMVNELSKEFNESQSEYKIVPVYKGNYPETLNAGIAAFRS
KQPPAILQVFDAGSGVMMAAEGAIVPAAEVLEKGGYKFDKSQYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDAFKKA
GLDENKPPKTWPEVFEAAKKIKASGASPCGFTSTWLTWIQTENFAAWNNVPYGTNENGLAGTDVKLEINSPLYVEHFQAI
ADLAKDGTFRYGGRTSEAKQLFTSGECAMLTESSGGLGDVVKSGINYGIGQLPYYEGHGPQNTIPGGASLWVFAGLSDDQ
YKGIAEFFNFLSQTKIQVKLHEKSGYLPVTLAAYEETKKSDFYEKNPGRETPILQMMGKEPTENSKGVRLVNLPQVRDIL
NEEFEAMLGGKQDAKTALDNAVKRGNAAIAAAQ
>Mature_433_residues
MFTRLITTSALTGAIALTIGSQAFAQTELAWWHGMTGANNEMVNELSKEFNESQSEYKIVPVYKGNYPETLNAGIAAFRS
KQPPAILQVFDAGSGVMMAAEGAIVPAAEVLEKGGYKFDKSQYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDAFKKA
GLDENKPPKTWPEVFEAAKKIKASGASPCGFTSTWLTWIQTENFAAWNNVPYGTNENGLAGTDVKLEINSPLYVEHFQAI
ADLAKDGTFRYGGRTSEAKQLFTSGECAMLTESSGGLGDVVKSGINYGIGQLPYYEGHGPQNTIPGGASLWVFAGLSDDQ
YKGIAEFFNFLSQTKIQVKLHEKSGYLPVTLAAYEETKKSDFYEKNPGRETPILQMMGKEPTENSKGVRLVNLPQVRDIL
NEEFEAMLGGKQDAKTALDNAVKRGNAAIAAAQ

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=408, Percent_Identity=48.0392156862745, Blast_Score=396, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47109; Mature: 47109

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRLITTSALTGAIALTIGSQAFAQTELAWWHGMTGANNEMVNELSKEFNESQSEYKIV
CCCCEEEHHHHHCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE
PVYKGNYPETLNAGIAAFRSKQPPAILQVFDAGSGVMMAAEGAIVPAAEVLEKGGYKFDK
EEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHCCCCCCCH
SQYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDAFKKAGLDENKPPKTWPEVFEAAKK
HCCCCCEEEEEECCCCCEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHH
IKASGASPCGFTSTWLTWIQTENFAAWNNVPYGTNENGLAGTDVKLEINSPLYVEHFQAI
HHHCCCCCCCCHHHHHEEEECCCCEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
ADLAKDGTFRYGGRTSEAKQLFTSGECAMLTESSGGLGDVVKSGINYGIGQLPYYEGHGP
HHHHHCCCEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC
QNTIPGGASLWVFAGLSDDQYKGIAEFFNFLSQTKIQVKLHEKSGYLPVTLAAYEETKKS
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEHHHHHHC
DFYEKNPGRETPILQMMGKEPTENSKGVRLVNLPQVRDILNEEFEAMLGGKQDAKTALDN
CCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH
AVKRGNAAIAAAQ
HHHCCCCEEEECC
>Mature Secondary Structure
MFTRLITTSALTGAIALTIGSQAFAQTELAWWHGMTGANNEMVNELSKEFNESQSEYKIV
CCCCEEEHHHHHCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE
PVYKGNYPETLNAGIAAFRSKQPPAILQVFDAGSGVMMAAEGAIVPAAEVLEKGGYKFDK
EEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHCCCCCCCH
SQYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDAFKKAGLDENKPPKTWPEVFEAAKK
HCCCCCEEEEEECCCCCEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHH
IKASGASPCGFTSTWLTWIQTENFAAWNNVPYGTNENGLAGTDVKLEINSPLYVEHFQAI
HHHCCCCCCCCHHHHHEEEECCCCEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
ADLAKDGTFRYGGRTSEAKQLFTSGECAMLTESSGGLGDVVKSGINYGIGQLPYYEGHGP
HHHHHCCCEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC
QNTIPGGASLWVFAGLSDDQYKGIAEFFNFLSQTKIQVKLHEKSGYLPVTLAAYEETKKS
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEHHHHHHC
DFYEKNPGRETPILQMMGKEPTENSKGVRLVNLPQVRDILNEEFEAMLGGKQDAKTALDN
CCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH
AVKRGNAAIAAAQ
HHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA