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The map label for this gene is ycjP [H]

Identifier: 225686150

GI number: 225686150

Start: 290502

End: 291314

Strand: Direct

Name: ycjP [H]

Synonym: BMEA_B0306

Alternate gene names: 225686150

Gene position: 290502-291314 (Clockwise)

Preceding gene: 225686149

Following gene: 225686151

Centisome position: 24.5

GC content: 58.67

Gene sequence:

>813_bases
ATGATGCGCGTTGTGAAACGTTCCGCCTTTTATCTGCTTGTGGCGCTCATCATTCTGGTTGCGGTGTTTCCGTTCTATTA
TGCGATCATCACAAGCTTTAAATCGGGAACCGCGCTGTTTCAGGTCGATTATTGGCCGAAAAGCCTCTCGCTCGACAATT
ATACCGGCGTGCTGACGCAGGGAAGCTTTGTGCGCAGCCTCGGCAATTCGCTTCTGGTGGCAATTTCGCTCCTGTTGGCC
GTGACGGCTGCCTATGCGCTGGCGCGGGTGCGCTTTCGGGGCAGGGGGCTCTTGCTGCTCACCATTCTTTCGGTGTCCAT
GTTCCCGCAGATTGCGGTGCTGGCGGGCCTGTTCGAGCTGATCCGCTTCCTTGGCATCTTTAACACGCCGCTGGCGCTGA
TCTTTTCCTATATGATCTTCACGCTGCCATTCACGGTCTGGGTGCTGACCACCTTCATGCGTGACCTGCCGGTGGAGATC
GAGGAGGCGGCCATCGTGGACGGCGCATCGCCATGGGTCATCATCACGCGGGTTTTCATGCCGCTCATGTGGCCCGCACT
GGTGACGACGGGGCTTCTCGCCTTCATTTCAGCGTGGAACGAGTTCCTCTTCGCGCTCACCTTCACTTCGTCCGGCAGCC
AGCGCACCGTGCCTGTCGCCATCGCGCTTCTTTCCGGCAGCAGTCAGTTTGAAATCCCCTGGGGCAACATCATGGCGGCT
TCCGTTATCGTGACGGTCCCCCTCGTCATCCTCGTGCTCATCTTCCAGCGGCGGATCGTTTCCGGTCTGACGGCAGGCGG
CGTAAAGGGTTAG

Upstream 100 bases:

>100_bases
GCGCGGCGGCATCCACGATGCTGTTCCTCATCATCGCAGGCATTACCGTGCTCTACATGTTCTTCGGGCGCGTGAATATT
GGCGGCAGGGGGGAATAGTC

Downstream 100 bases:

>100_bases
GTATTCATGGCAGAGCTTCAATTGCGCGATGTGCGCAAGTCTTTCGGCAGTTTCGAGGTCATCAAGGGCGTGGATATGGA
TATCCGCCCCGGCGAGTTCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MMRVVKRSAFYLLVALIILVAVFPFYYAIITSFKSGTALFQVDYWPKSLSLDNYTGVLTQGSFVRSLGNSLLVAISLLLA
VTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGLFELIRFLGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPVEI
EEAAIVDGASPWVIITRVFMPLMWPALVTTGLLAFISAWNEFLFALTFTSSGSQRTVPVAIALLSGSSQFEIPWGNIMAA
SVIVTVPLVILVLIFQRRIVSGLTAGGVKG

Sequences:

>Translated_270_residues
MMRVVKRSAFYLLVALIILVAVFPFYYAIITSFKSGTALFQVDYWPKSLSLDNYTGVLTQGSFVRSLGNSLLVAISLLLA
VTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGLFELIRFLGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPVEI
EEAAIVDGASPWVIITRVFMPLMWPALVTTGLLAFISAWNEFLFALTFTSSGSQRTVPVAIALLSGSSQFEIPWGNIMAA
SVIVTVPLVILVLIFQRRIVSGLTAGGVKG
>Mature_270_residues
MMRVVKRSAFYLLVALIILVAVFPFYYAIITSFKSGTALFQVDYWPKSLSLDNYTGVLTQGSFVRSLGNSLLVAISLLLA
VTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGLFELIRFLGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPVEI
EEAAIVDGASPWVIITRVFMPLMWPALVTTGLLAFISAWNEFLFALTFTSSGSQRTVPVAIALLSGSSQFEIPWGNIMAA
SVIVTVPLVILVLIFQRRIVSGLTAGGVKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=36.8231046931408, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790464, Length=247, Percent_Identity=35.2226720647773, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789860, Length=278, Percent_Identity=26.6187050359712, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787368, Length=173, Percent_Identity=28.3236994219653, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29620; Mature: 29620

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRVVKRSAFYLLVALIILVAVFPFYYAIITSFKSGTALFQVDYWPKSLSLDNYTGVLTQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHCC
GSFVRSLGNSLLVAISLLLAVTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGLFEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRFLGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPVEIEEAAIVDGASPWVIITRVFM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHH
PLMWPALVTTGLLAFISAWNEFLFALTFTSSGSQRTVPVAIALLSGSSQFEIPWGNIMAA
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEEEEECCCCEEECCCHHHHHH
SVIVTVPLVILVLIFQRRIVSGLTAGGVKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMRVVKRSAFYLLVALIILVAVFPFYYAIITSFKSGTALFQVDYWPKSLSLDNYTGVLTQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHCC
GSFVRSLGNSLLVAISLLLAVTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGLFEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRFLGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPVEIEEAAIVDGASPWVIITRVFM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHH
PLMWPALVTTGLLAFISAWNEFLFALTFTSSGSQRTVPVAIALLSGSSQFEIPWGNIMAA
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEEEEECCCCEEECCCHHHHHH
SVIVTVPLVILVLIFQRRIVSGLTAGGVKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]