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The map label for this gene is ycjO [C]

Identifier: 225686149

GI number: 225686149

Start: 289522

End: 290499

Strand: Direct

Name: ycjO [C]

Synonym: BMEA_B0305

Alternate gene names: 225686149

Gene position: 289522-290499 (Clockwise)

Preceding gene: 225686148

Following gene: 225686150

Centisome position: 24.42

GC content: 57.36

Gene sequence:

>978_bases
ATGACGGAGACTTCCCTTGATGCGTCGAGGAGCCTGCGGGTGCGGGCTCATTCCGACCTTGGCGCCCAGCGTATCCGTTC
GGCATGGATATTTCTTGCGCCGACGCTGATCGTGCTGGCGATAGTGGCCGGCTGGCCGCTGCTGCGAACCGTCTATTTCA
GCCTTACCAATGCTTCGCTGACAAACCTTGCCGGCGCTGAATTCGTGGGCTTCAAGAACTATTTCTCATGGGTCACGCTC
AAGAGCGGCCGCACGGTTTATAGCGGTCTTCTTACCGATATGGCCTGGTGGCGGGCGGTGTGGAACACGATCCGGTTCAC
GCTGCTTTCGGTCAGCCTTGAAACCATATTCGGCCTTGTCGTGGCACTGGTGCTGAATGCGAATTTCCGCGGGCGCGGGC
TGGTGCGTGCGGCGATCCTGATCCCGTGGGCGATCCCGACCATCGTTTCGGCAAAAATGTGGGGCTGGATGCTCAACGAC
CAGTTCGGCATCCTGAACCATATCCTGCTCAATCTTGGCATCATCAGCCACAAGATTGCATGGACCGCCAATCCGGACAC
TGCAATGATCGCAATCCTGATTGTCGACGTCTGGAAAACGACACCCTTTATGGCGCTGCTCATCCTGGCGGGTCTGCAAA
TGGTGCCGTCCGATATTTATGAAGCGGCGAGGATCGACGGCGTGCATCCGCTGAAAGTGTTCTGGCGCGTGACACTGCCG
CTGATCCGTCCGGCGCTGATGGTGGCGATCATCTTCCGTATGCTGGATGCCTTGCGCATTTTCGATCTCATCTATGTGCT
GACGCCCAACAATGCGCAGACCAAGACCATGTCGGTTTATGCGCGCGAAAACCTCTTCGATTTCGACAAGTTCGCCTATG
GCGCGGCGGCATCCACGATGCTGTTCCTCATCATCGCAGGCATTACCGTGCTCTACATGTTCTTCGGGCGCGTGAATATT
GGCGGCAGGGGGGAATAG

Upstream 100 bases:

>100_bases
GAGCTTAAAGGCTCGGGCTGGTAGAGCTGATCGAGCCGCGTTCGGGCTTTTCCCCAAGCGGCCCGAACGCCCTTCTCATC
CGATGACCCGGAGCAGGATC

Downstream 100 bases:

>100_bases
TCATGATGCGCGTTGTGAAACGTTCCGCCTTTTATCTGCTTGTGGCGCTCATCATTCTGGTTGCGGTGTTTCCGTTCTAT
TATGCGATCATCACAAGCTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTETSLDASRSLRVRAHSDLGAQRIRSAWIFLAPTLIVLAIVAGWPLLRTVYFSLTNASLTNLAGAEFVGFKNYFSWVTL
KSGRTVYSGLLTDMAWWRAVWNTIRFTLLSVSLETIFGLVVALVLNANFRGRGLVRAAILIPWAIPTIVSAKMWGWMLND
QFGILNHILLNLGIISHKIAWTANPDTAMIAILIVDVWKTTPFMALLILAGLQMVPSDIYEAARIDGVHPLKVFWRVTLP
LIRPALMVAIIFRMLDALRIFDLIYVLTPNNAQTKTMSVYARENLFDFDKFAYGAAASTMLFLIIAGITVLYMFFGRVNI
GGRGE

Sequences:

>Translated_325_residues
MTETSLDASRSLRVRAHSDLGAQRIRSAWIFLAPTLIVLAIVAGWPLLRTVYFSLTNASLTNLAGAEFVGFKNYFSWVTL
KSGRTVYSGLLTDMAWWRAVWNTIRFTLLSVSLETIFGLVVALVLNANFRGRGLVRAAILIPWAIPTIVSAKMWGWMLND
QFGILNHILLNLGIISHKIAWTANPDTAMIAILIVDVWKTTPFMALLILAGLQMVPSDIYEAARIDGVHPLKVFWRVTLP
LIRPALMVAIIFRMLDALRIFDLIYVLTPNNAQTKTMSVYARENLFDFDKFAYGAAASTMLFLIIAGITVLYMFFGRVNI
GGRGE
>Mature_324_residues
TETSLDASRSLRVRAHSDLGAQRIRSAWIFLAPTLIVLAIVAGWPLLRTVYFSLTNASLTNLAGAEFVGFKNYFSWVTLK
SGRTVYSGLLTDMAWWRAVWNTIRFTLLSVSLETIFGLVVALVLNANFRGRGLVRAAILIPWAIPTIVSAKMWGWMLNDQ
FGILNHILLNLGIISHKIAWTANPDTAMIAILIVDVWKTTPFMALLILAGLQMVPSDIYEAARIDGVHPLKVFWRVTLPL
IRPALMVAIIFRMLDALRIFDLIYVLTPNNAQTKTMSVYARENLFDFDKFAYGAAASTMLFLIIAGITVLYMFFGRVNIG
GRGE

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=281, Percent_Identity=28.4697508896797, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1790465, Length=227, Percent_Identity=29.5154185022026, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=27.1477663230241, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36319; Mature: 36187

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETSLDASRSLRVRAHSDLGAQRIRSAWIFLAPTLIVLAIVAGWPLLRTVYFSLTNASL
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
TNLAGAEFVGFKNYFSWVTLKSGRTVYSGLLTDMAWWRAVWNTIRFTLLSVSLETIFGLV
HHCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVLNANFRGRGLVRAAILIPWAIPTIVSAKMWGWMLNDQFGILNHILLNLGIISHKIA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE
WTANPDTAMIAILIVDVWKTTPFMALLILAGLQMVPSDIYEAARIDGVHPLKVFWRVTLP
EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LIRPALMVAIIFRMLDALRIFDLIYVLTPNNAQTKTMSVYARENLFDFDKFAYGAAASTM
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHH
LFLIIAGITVLYMFFGRVNIGGRGE
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TETSLDASRSLRVRAHSDLGAQRIRSAWIFLAPTLIVLAIVAGWPLLRTVYFSLTNASL
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
TNLAGAEFVGFKNYFSWVTLKSGRTVYSGLLTDMAWWRAVWNTIRFTLLSVSLETIFGLV
HHCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVLNANFRGRGLVRAAILIPWAIPTIVSAKMWGWMLNDQFGILNHILLNLGIISHKIA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE
WTANPDTAMIAILIVDVWKTTPFMALLILAGLQMVPSDIYEAARIDGVHPLKVFWRVTLP
EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LIRPALMVAIIFRMLDALRIFDLIYVLTPNNAQTKTMSVYARENLFDFDKFAYGAAASTM
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHH
LFLIIAGITVLYMFFGRVNIGGRGE
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]