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The map label for this gene is xerC [H]

Identifier: 225853354

GI number: 225853354

Start: 1866340

End: 1867287

Strand: Direct

Name: xerC [H]

Synonym: BMEA_A1973

Alternate gene names: 225853354

Gene position: 1866340-1867287 (Clockwise)

Preceding gene: 225853350

Following gene: 225853355

Centisome position: 87.8

GC content: 62.66

Gene sequence:

>948_bases
ATGGCGACAAATAGCGAATTTCTGATCCCGGCGCGCGCCGACCTTGCAGCAGCGCGCGAGGAATGGCTGAAATCGCTGAA
AACCATGCGGCGTCTTTCCGACAATACGCTCATTGCCTATGAACGCGATACGCGCCAGTTCCTGCAATTTCTCACCGGCC
ATCTGGGTGAGCCGCCTTCGCTAAAAGAGATCGGCAATCTGCGTATCGCCGATCTGCGATCCTTCCTTGCCAATCGCCGC
AATGACGGCGCGGGGGCCCGCACGCTTGGCCGGGGGCTTGCCGGGGTACGCTCACTCCTGCGCCATCTGGAAAAGCGCGG
CCTCGTCAATGCGGCAGGCGCAAGCGCCATGCGTGCGCCGCGCCAGCCGAAATCTCTGCCGAAGCCGCTGACCGCAGACG
ATGCCCGGCGGGTGGTTTCGGCGGATGGTCAGATGGCGGAAGAACCATGGATCGCCGCGCGCAATGCTGCCGTACTGACG
CTGCTTTATGGCTGCGGCCTGCGTATTTCCGAAGCCCTGGGGCTCAGCGGAGACGCGCTCAGCGATCCTTCTGCCCGCTC
CATGACCATTACCGGCAAGGGAAGCAAGACGCGGCTCGTGCCCTTGCTGCCTGCGGTCCACAAGGCTGTCGCGCAATACC
GCGCGCTTTGTCCTTTCGATCTTTCTGCCGGGCAGCCGCTGTTTCGCGGTGCAAAAGGCGGCCCTCTTCATGCCGCGATC
ATACAGCGCGAAATGCAGAAACTGCGCGCAGGCCTGGGTCTGCCCGATAGTGCCACCCCCCATGCCCTGCGCCACTCTTT
TGCAACGCATCTTCTGGGGCGCGGAGGCGATTTGCGCACCATTCAGGAGCTTCTGGGCCATGCAAGCCTGTCCACCACAC
AGGTCTATACCGGCGTCGATACGCAGCGATTGCTGGAAGTCTACGACAAGACGCATCCCCGCGCCTGA

Upstream 100 bases:

>100_bases
AAATTTTGACACAGGTTCTGAACGCCAAAACCGCGGCAACCTGCCGGTAACCTGCTTTTGTTAAGCTGGCCCTTCCATAT
CCGAACGGCAGATTTTGACC

Downstream 100 bases:

>100_bases
AATTCACAAAGTTTGGCTGTCGCGCGCCTGTAAAACCCGGCTATAGTCGGGCTATGAAAAAGCTTCTTCTCCTCTTCATT
TGCGTGGCGTTTCTGGCGCC

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MATNSEFLIPARADLAAAREEWLKSLKTMRRLSDNTLIAYERDTRQFLQFLTGHLGEPPSLKEIGNLRIADLRSFLANRR
NDGAGARTLGRGLAGVRSLLRHLEKRGLVNAAGASAMRAPRQPKSLPKPLTADDARRVVSADGQMAEEPWIAARNAAVLT
LLYGCGLRISEALGLSGDALSDPSARSMTITGKGSKTRLVPLLPAVHKAVAQYRALCPFDLSAGQPLFRGAKGGPLHAAI
IQREMQKLRAGLGLPDSATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQVYTGVDTQRLLEVYDKTHPRA

Sequences:

>Translated_315_residues
MATNSEFLIPARADLAAAREEWLKSLKTMRRLSDNTLIAYERDTRQFLQFLTGHLGEPPSLKEIGNLRIADLRSFLANRR
NDGAGARTLGRGLAGVRSLLRHLEKRGLVNAAGASAMRAPRQPKSLPKPLTADDARRVVSADGQMAEEPWIAARNAAVLT
LLYGCGLRISEALGLSGDALSDPSARSMTITGKGSKTRLVPLLPAVHKAVAQYRALCPFDLSAGQPLFRGAKGGPLHAAI
IQREMQKLRAGLGLPDSATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQVYTGVDTQRLLEVYDKTHPRA
>Mature_314_residues
ATNSEFLIPARADLAAAREEWLKSLKTMRRLSDNTLIAYERDTRQFLQFLTGHLGEPPSLKEIGNLRIADLRSFLANRRN
DGAGARTLGRGLAGVRSLLRHLEKRGLVNAAGASAMRAPRQPKSLPKPLTADDARRVVSADGQMAEEPWIAARNAAVLTL
LYGCGLRISEALGLSGDALSDPSARSMTITGKGSKTRLVPLLPAVHKAVAQYRALCPFDLSAGQPLFRGAKGGPLHAAII
QREMQKLRAGLGLPDSATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQVYTGVDTQRLLEVYDKTHPRA

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=302, Percent_Identity=35.7615894039735, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789261, Length=320, Percent_Identity=35, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 34051; Mature: 33919

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNSEFLIPARADLAAAREEWLKSLKTMRRLSDNTLIAYERDTRQFLQFLTGHLGEPPS
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCC
LKEIGNLRIADLRSFLANRRNDGAGARTLGRGLAGVRSLLRHLEKRGLVNAAGASAMRAP
HHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
RQPKSLPKPLTADDARRVVSADGQMAEEPWIAARNAAVLTLLYGCGLRISEALGLSGDAL
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCCHHHHHHCCCCCCC
SDPSARSMTITGKGSKTRLVPLLPAVHKAVAQYRALCPFDLSAGQPLFRGAKGGPLHAAI
CCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHH
IQREMQKLRAGLGLPDSATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQVYTGVD
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHEECCCC
TQRLLEVYDKTHPRA
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATNSEFLIPARADLAAAREEWLKSLKTMRRLSDNTLIAYERDTRQFLQFLTGHLGEPPS
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCC
LKEIGNLRIADLRSFLANRRNDGAGARTLGRGLAGVRSLLRHLEKRGLVNAAGASAMRAP
HHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
RQPKSLPKPLTADDARRVVSADGQMAEEPWIAARNAAVLTLLYGCGLRISEALGLSGDAL
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCCHHHHHHCCCCCCC
SDPSARSMTITGKGSKTRLVPLLPAVHKAVAQYRALCPFDLSAGQPLFRGAKGGPLHAAI
CCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHH
IQREMQKLRAGLGLPDSATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQVYTGVD
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHEECCCC
TQRLLEVYDKTHPRA
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]