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The map label for this gene is ybdA [C]

Identifier: 225853319

GI number: 225853319

Start: 1833744

End: 1834982

Strand: Direct

Name: ybdA [C]

Synonym: BMEA_A1935

Alternate gene names: 225853319

Gene position: 1833744-1834982 (Clockwise)

Preceding gene: 225853318

Following gene: 225853325

Centisome position: 86.27

GC content: 60.13

Gene sequence:

>1239_bases
ATGCCCACCATCGATGCTTCTTCCGTGGATCGCTTCGCGGCCTTCCGCCATTCTGCCTTCAAGAAATACTGGGGCGCACG
CTTTTTGAGCGCATTCGCCGTGCAGATCGTAAGCGTATCGGTCGGCTGGCAAATCTACGATCTCACACGCGATGCCTTCA
ATCTGGGCATGGTGGGGCTGGTACAGTTCCTCCCCGCGCTGCTTCTCGTGCTGGTCACAGGCGCGGCGGCAGACCGCTTC
GGCAGGCGTCTTATCATGGGCCTGTCCCTCATCCTGGAAGGCATCGTCACAGCAGCATTGCTGGCGTTCACACTGGCCGG
ATTGTTCGAGCCCCTCACCGTTTTCGCCGCACTTCTCATCTTCGGCGTCGCACGCGCCTTCCTCGGTCCGTCTTCGGCCT
CGCTCGTTGTCAATCTGGTGCCGACAGAAGATTTCGCCAATGCGGTTTCATGGAACTCCTCCGCATGGCAGGTCGCCACG
ATCGTTGGCCCGGTTGCAGGCGGGCTTCTTTACGGCATTTCGCCAGTTGCAGCCTACAGTATCGCCACCCTGTTCCTGAT
TGCCGGTTCGCTCCTGATCTTCTCCATCCCCAAACCGCGCCAGCATACACTCATCGAAGAACGCTCGATCTCAACTATTC
TGGCCGGGTTCCGATATATATGGAAAGAAAAGATCGTTCTGGGCGCCATCTCACTTGATCTTTTCGCCGTCCTGCTCGGC
GGCACGGTGGCGCTCCTGCCCATCTATGCGCGCGACATTCTCGACCTCGGACCCTGGGGGCTTGGATTGCTGCGCTCAGC
ACCCGGCATTGGAGCCGTCCTCACCGCCCTCTGGCTGGCCGGCCACCCGATCCGCGATCATGCGGGCCGCGCCATGTTCC
TCTTTGTGGGCCTGTTCGGCTTCTTCAACGTTCTTTTCGGTCTTTCAACCTTGACCTGGCTTTCAATACTGGCGCTAGCG
CTGGCAGGTGCGGCCGACATGATAAGCGTCTATATCCGGGAAACGCTGATGCAGCTTTGGACACCCGACCATATGCGCGG
GCGGGTCAACGCGGTCAACATGGTCTTTGTCGGTGCATCGAACGAGCTTGGTGAATTTCGTGCAGGCGTGATGGCGGCAG
CCATTGGCGCCGTGCCTGCCGTGGTCATTGGCGGTATCAGAGCCATCGCGGTTGCAGCGGGCTGGGCCGCCATGTTCCCG
CAATTGCGAAAAGCGCGCCACCTGCAAGGGCGCACCTGA

Upstream 100 bases:

>100_bases
GGCTGCGATCTTCTCCATAAAACTTGATCACAAAAAGTGATGACGATCATGGGAAGGATGCTGTAAGAAACGGGCATCTT
TCTCGTCTATGTCTTGAGCA

Downstream 100 bases:

>100_bases
ATTCTGCAAAAACAGGACTTCCGGCTCAGGACGCAGGGGCGCTGCGGCTTGCCTCTTCCGCCCGGGCCTGAATGGCACTA
CGATCTTCCTCGCGAATGCC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; Facilitator Superfamily Transporter; DrugProton Antiporter; Transporter Facilitator Family; Transmembrane Protein; Permease Of Facilitator Superfamily; Membrane Transporter; MFS Family Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Siderophore Export Protein; Integral Membrane Protein; Permease Protein; Permeases Of Facilitator Superfamily; Permease; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Facilitator Superfamily Transporter Permease; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Facilitator Superfamily Multidrug Resistance Protein; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPTIDASSVDRFAAFRHSAFKKYWGARFLSAFAVQIVSVSVGWQIYDLTRDAFNLGMVGLVQFLPALLLVLVTGAAADRF
GRRLIMGLSLILEGIVTAALLAFTLAGLFEPLTVFAALLIFGVARAFLGPSSASLVVNLVPTEDFANAVSWNSSAWQVAT
IVGPVAGGLLYGISPVAAYSIATLFLIAGSLLIFSIPKPRQHTLIEERSISTILAGFRYIWKEKIVLGAISLDLFAVLLG
GTVALLPIYARDILDLGPWGLGLLRSAPGIGAVLTALWLAGHPIRDHAGRAMFLFVGLFGFFNVLFGLSTLTWLSILALA
LAGAADMISVYIRETLMQLWTPDHMRGRVNAVNMVFVGASNELGEFRAGVMAAAIGAVPAVVIGGIRAIAVAAGWAAMFP
QLRKARHLQGRT

Sequences:

>Translated_412_residues
MPTIDASSVDRFAAFRHSAFKKYWGARFLSAFAVQIVSVSVGWQIYDLTRDAFNLGMVGLVQFLPALLLVLVTGAAADRF
GRRLIMGLSLILEGIVTAALLAFTLAGLFEPLTVFAALLIFGVARAFLGPSSASLVVNLVPTEDFANAVSWNSSAWQVAT
IVGPVAGGLLYGISPVAAYSIATLFLIAGSLLIFSIPKPRQHTLIEERSISTILAGFRYIWKEKIVLGAISLDLFAVLLG
GTVALLPIYARDILDLGPWGLGLLRSAPGIGAVLTALWLAGHPIRDHAGRAMFLFVGLFGFFNVLFGLSTLTWLSILALA
LAGAADMISVYIRETLMQLWTPDHMRGRVNAVNMVFVGASNELGEFRAGVMAAAIGAVPAVVIGGIRAIAVAAGWAAMFP
QLRKARHLQGRT
>Mature_411_residues
PTIDASSVDRFAAFRHSAFKKYWGARFLSAFAVQIVSVSVGWQIYDLTRDAFNLGMVGLVQFLPALLLVLVTGAAADRFG
RRLIMGLSLILEGIVTAALLAFTLAGLFEPLTVFAALLIFGVARAFLGPSSASLVVNLVPTEDFANAVSWNSSAWQVATI
VGPVAGGLLYGISPVAAYSIATLFLIAGSLLIFSIPKPRQHTLIEERSISTILAGFRYIWKEKIVLGAISLDLFAVLLGG
TVALLPIYARDILDLGPWGLGLLRSAPGIGAVLTALWLAGHPIRDHAGRAMFLFVGLFGFFNVLFGLSTLTWLSILALAL
AGAADMISVYIRETLMQLWTPDHMRGRVNAVNMVFVGASNELGEFRAGVMAAAIGAVPAVVIGGIRAIAVAAGWAAMFPQ
LRKARHLQGRT

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43896; Mature: 43764

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIDASSVDRFAAFRHSAFKKYWGARFLSAFAVQIVSVSVGWQIYDLTRDAFNLGMVGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH
VQFLPALLLVLVTGAAADRFGRRLIMGLSLILEGIVTAALLAFTLAGLFEPLTVFAALLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVARAFLGPSSASLVVNLVPTEDFANAVSWNSSAWQVATIVGPVAGGLLYGISPVAAYS
HHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHH
IATLFLIAGSLLIFSIPKPRQHTLIEERSISTILAGFRYIWKEKIVLGAISLDLFAVLLG
HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTVALLPIYARDILDLGPWGLGLLRSAPGIGAVLTALWLAGHPIRDHAGRAMFLFVGLFG
CHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHH
FFNVLFGLSTLTWLSILALALAGAADMISVYIRETLMQLWTPDHMRGRVNAVNMVFVGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECC
NELGEFRAGVMAAAIGAVPAVVIGGIRAIAVAAGWAAMFPQLRKARHLQGRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTIDASSVDRFAAFRHSAFKKYWGARFLSAFAVQIVSVSVGWQIYDLTRDAFNLGMVGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH
VQFLPALLLVLVTGAAADRFGRRLIMGLSLILEGIVTAALLAFTLAGLFEPLTVFAALLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVARAFLGPSSASLVVNLVPTEDFANAVSWNSSAWQVATIVGPVAGGLLYGISPVAAYS
HHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHH
IATLFLIAGSLLIFSIPKPRQHTLIEERSISTILAGFRYIWKEKIVLGAISLDLFAVLLG
HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTVALLPIYARDILDLGPWGLGLLRSAPGIGAVLTALWLAGHPIRDHAGRAMFLFVGLFG
CHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHH
FFNVLFGLSTLTWLSILALALAGAADMISVYIRETLMQLWTPDHMRGRVNAVNMVFVGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECC
NELGEFRAGVMAAAIGAVPAVVIGGIRAIAVAAGWAAMFPQLRKARHLQGRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA