| Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_012441 |
| Length | 2,125,701 |
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The map label for this gene is secD [H]
Identifier: 225852812
GI number: 225852812
Start: 1304614
End: 1307151
Strand: Direct
Name: secD [H]
Synonym: BMEA_A1370
Alternate gene names: 225852812
Gene position: 1304614-1307151 (Clockwise)
Preceding gene: 225852808
Following gene: 225852813
Centisome position: 61.37
GC content: 59.34
Gene sequence:
>2538_bases ATGCGTACTTCAAAATGGGTCGTTGCGCTTTATAGCCTGGTCGTTCTGATCGGCATAATCATCGCCTTGCCCAACTTCTT TACCCAAAAGCAACTGGATGCGCTGCCATCATGGCTGCCGAAGCGTCAGGTCACACTCGGCCTCGATCTGCGCGGCGGCT CCTATCTCGTACTCGAAGTGGATGCGGCAGCACTGAAAAAGGATCGCCTGCGCACCCTGCTCGACGATGCCCGCAGCAAG CTTCGCGCCGACCGCATCCAGCCGCAGTCGATCCGCGTCGTTGGCGACGCGGTTGTCGTAACCATCCCCGACGCCGACCA GCGCGCCAAGGCCGAAACAGCCCTGCGCACCCTCATCTCGCAGGTGAACACCAGCGGCTTTGGCACGGCGATCAACGACA TCGACGTCACGGAAAACGACAATAACCAGATTCGCCTGACGCTGACTGAGGCAGGCTTCAATTACCGCCTCGATTCAGCC CTTCAGCAAAGCCTTGAAATCATCCGCCAGCGCGTTGACCAGGTTGGCGTTGCCGAACCGTCCATCCAGCGCGTCGGCTC TGACCGCATCGTGGTTCAGCTTCCAGGCCTTCAGGATCCGGCACAGCTCCGCCAGCTTCTCGGAAGCACGGCGAAGATGA GCTTCCACATGGTCGCGGATGCCAATCCGAACGATCCGCCGCCTCCGGGCGTGACCATCATGCCGGATTCAAAAAATCCC GCCATCAAATATCCGATCGAGGATCAGGTCGCCCTTTCCGGCGAGCGCCTCACCGATGCGCGCGCGGGCTTCGACCCGCG GACCAATGAGCCTATCGTTTCGTTCCGTTTCGACAGCCTCGGTGCACGCCAGTTCGCGGATATCACCACCAAGAACGTCA ACCGCCCCTTCGCCATCGTTCTCGACGGCAAGGTGCTGAGCGCGCCGGTCATCCGCGAGCCGATCACGGGCGGCTCCGGC CAGATCAGCGGCAGCTTCACCGTTCAGGATACGGTCATCCTCTCCGCGCTTCTGCGCGCAGGCGCCCTGCCCGCTCCGCT CACCGTCATCGAAGAACGCACCGTCGGCCCGGATCTTGGCGGCGACGCCATCAAGATGGGCCTGATGACAGGTATCATCG GCTTCCTTCTCGTGGCCGTCTTCATCCTGCTTCTCTATGGATTCTGGGGTGTGATTGCGAATGTCGCGCTTCTGCTCCAT ACGCTGCTGACCTTCTCGGCGCTAAGCCTGATCGGCGCAACGCTGACGCTGCCCGGTATCGCAGGCATTATTCTCGGCAT CGGCATCGCGGTCGATGCGAATATTCTCATCAACGAGCGCATCCGTGAAGAAACCCGCAAGGGACTTGGCGCGATGGCGG CGCTCGACAAGGGCTTCCACAGCGCCTTTGCCACCATCGTGGACGCCAATGTCACGACGCTGACGGCAACCATCCTTCTG TTCCTGTTCGGCACCGGCCCGGTTCGCGGCTTCGCCGTCACCATGATGCTCGGCATCGCCATTTCGATGTTCACCGATGT GACGCTGGTGCGCATGATCATGGCGTGGTTCGTCCGCCGCCGCAAACTCAAGGTGCTGCACATCGAGCCATTCCTGAAAT TCGTGCCCGAGCATACGAATTTCCGGTTTATGAATGCGCGTTTCATCGGCATCGGCGTTTCCATCGTGCTGTCGATTGCC TCGATCATCCTTTTCTTCAAGCCGGGCCTCAATTATGGCATCGACTTCAAGGGCGGTATCCAGGCAGAAATCAGCACCTC ACAGCCAGCCGATCTTGCGCAGCTTCGCGCCAAGCTTGGCGCGCTCAACCTGGGTGAAGTCGCACTTCAAACCGCTGGCA GCCCCAATCAGGTTCTGATCCGCGTTCAGCGTCAGGAGGGTGGCGAAGAGGCGCAGACGGCAGCCGTCAACAAGATGCGT GAAGCCGTGACCGAACTCGATCCCGGTGTGAAGATCGAACGCACCGAAGTCGTCGGCCCGAAAGTCTCCGGTGAGCTCGC CCGTTCGGGCATGATCGCGGTCATTCTTTCGGCTGTCGTCATGCTGTTCTATATCTGGTGGCGGTTCGAGTGGTTCTTCG CGCTGGGGGCCATCGCGACGCTCATTCTCGACACCACAAAGATCATCGGCTTTTTCGCCCTGACACAACTCGACTTCAAC CTGACCGCCATTGCCGCGCTGCTGACCATTATCGGTTATTCGGTGAACGACAAGGTGGTCGTCTATGACCGCATGCGTGA AAACATGCGCCTCTACAAGTCGAAGACGCTGCGCGAAATCATCGATATGAGCATCAATCAGGTGCTTGTGCGCTGTATCT ACACGTCAATGACAACTTTCCTGTGTATGTTCCCCATGGCGATCTGGGGCGGCAGCGCCGTTCATAATTTTGCCGTGCCT ATGCTGTTCGGTATTGTGATCGCGACGTCGTCTTCGATCTTCATCGCGGCGCCGATTCTGCTGTTGCTGGGCGACTGGTG GCAGCGTCACAAGGCGGCGCACAAGACAGCCGAAGAAGGCGCAATCGCGCAGAAATAA
Upstream 100 bases:
>100_bases CAGGAAGATTGGGCCTCACCAATCCGAATACCATTATAACAGCCCGCAAGCCCGCTTCATGAGTGGCGCACGGGGCATGA TAAACCCGGAACCATAATTC
Downstream 100 bases:
>100_bases CCAACCTGCCGGGCGAGGTATCCGCCTTGCCCGGCCCTCATTGATGAATCTGGAAGAACAGAGCGGAAAGGCATCTGATG CCCCATGACACGCCTTTGAT
Product: bifunctional preprotein translocase subunit SecD/SecF
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 845; Mature: 845
Protein sequence:
>845_residues MRTSKWVVALYSLVVLIGIIIALPNFFTQKQLDALPSWLPKRQVTLGLDLRGGSYLVLEVDAAALKKDRLRTLLDDARSK LRADRIQPQSIRVVGDAVVVTIPDADQRAKAETALRTLISQVNTSGFGTAINDIDVTENDNNQIRLTLTEAGFNYRLDSA LQQSLEIIRQRVDQVGVAEPSIQRVGSDRIVVQLPGLQDPAQLRQLLGSTAKMSFHMVADANPNDPPPPGVTIMPDSKNP AIKYPIEDQVALSGERLTDARAGFDPRTNEPIVSFRFDSLGARQFADITTKNVNRPFAIVLDGKVLSAPVIREPITGGSG QISGSFTVQDTVILSALLRAGALPAPLTVIEERTVGPDLGGDAIKMGLMTGIIGFLLVAVFILLLYGFWGVIANVALLLH TLLTFSALSLIGATLTLPGIAGIILGIGIAVDANILINERIREETRKGLGAMAALDKGFHSAFATIVDANVTTLTATILL FLFGTGPVRGFAVTMMLGIAISMFTDVTLVRMIMAWFVRRRKLKVLHIEPFLKFVPEHTNFRFMNARFIGIGVSIVLSIA SIILFFKPGLNYGIDFKGGIQAEISTSQPADLAQLRAKLGALNLGEVALQTAGSPNQVLIRVQRQEGGEEAQTAAVNKMR EAVTELDPGVKIERTEVVGPKVSGELARSGMIAVILSAVVMLFYIWWRFEWFFALGAIATLILDTTKIIGFFALTQLDFN LTAIAALLTIIGYSVNDKVVVYDRMRENMRLYKSKTLREIIDMSINQVLVRCIYTSMTTFLCMFPMAIWGGSAVHNFAVP MLFGIVIATSSSIFIAAPILLLLGDWWQRHKAAHKTAEEGAIAQK
Sequences:
>Translated_845_residues MRTSKWVVALYSLVVLIGIIIALPNFFTQKQLDALPSWLPKRQVTLGLDLRGGSYLVLEVDAAALKKDRLRTLLDDARSK LRADRIQPQSIRVVGDAVVVTIPDADQRAKAETALRTLISQVNTSGFGTAINDIDVTENDNNQIRLTLTEAGFNYRLDSA LQQSLEIIRQRVDQVGVAEPSIQRVGSDRIVVQLPGLQDPAQLRQLLGSTAKMSFHMVADANPNDPPPPGVTIMPDSKNP AIKYPIEDQVALSGERLTDARAGFDPRTNEPIVSFRFDSLGARQFADITTKNVNRPFAIVLDGKVLSAPVIREPITGGSG QISGSFTVQDTVILSALLRAGALPAPLTVIEERTVGPDLGGDAIKMGLMTGIIGFLLVAVFILLLYGFWGVIANVALLLH TLLTFSALSLIGATLTLPGIAGIILGIGIAVDANILINERIREETRKGLGAMAALDKGFHSAFATIVDANVTTLTATILL FLFGTGPVRGFAVTMMLGIAISMFTDVTLVRMIMAWFVRRRKLKVLHIEPFLKFVPEHTNFRFMNARFIGIGVSIVLSIA SIILFFKPGLNYGIDFKGGIQAEISTSQPADLAQLRAKLGALNLGEVALQTAGSPNQVLIRVQRQEGGEEAQTAAVNKMR EAVTELDPGVKIERTEVVGPKVSGELARSGMIAVILSAVVMLFYIWWRFEWFFALGAIATLILDTTKIIGFFALTQLDFN LTAIAALLTIIGYSVNDKVVVYDRMRENMRLYKSKTLREIIDMSINQVLVRCIYTSMTTFLCMFPMAIWGGSAVHNFAVP MLFGIVIATSSSIFIAAPILLLLGDWWQRHKAAHKTAEEGAIAQK >Mature_845_residues MRTSKWVVALYSLVVLIGIIIALPNFFTQKQLDALPSWLPKRQVTLGLDLRGGSYLVLEVDAAALKKDRLRTLLDDARSK LRADRIQPQSIRVVGDAVVVTIPDADQRAKAETALRTLISQVNTSGFGTAINDIDVTENDNNQIRLTLTEAGFNYRLDSA LQQSLEIIRQRVDQVGVAEPSIQRVGSDRIVVQLPGLQDPAQLRQLLGSTAKMSFHMVADANPNDPPPPGVTIMPDSKNP AIKYPIEDQVALSGERLTDARAGFDPRTNEPIVSFRFDSLGARQFADITTKNVNRPFAIVLDGKVLSAPVIREPITGGSG QISGSFTVQDTVILSALLRAGALPAPLTVIEERTVGPDLGGDAIKMGLMTGIIGFLLVAVFILLLYGFWGVIANVALLLH TLLTFSALSLIGATLTLPGIAGIILGIGIAVDANILINERIREETRKGLGAMAALDKGFHSAFATIVDANVTTLTATILL FLFGTGPVRGFAVTMMLGIAISMFTDVTLVRMIMAWFVRRRKLKVLHIEPFLKFVPEHTNFRFMNARFIGIGVSIVLSIA SIILFFKPGLNYGIDFKGGIQAEISTSQPADLAQLRAKLGALNLGEVALQTAGSPNQVLIRVQRQEGGEEAQTAAVNKMR EAVTELDPGVKIERTEVVGPKVSGELARSGMIAVILSAVVMLFYIWWRFEWFFALGAIATLILDTTKIIGFFALTQLDFN LTAIAALLTIIGYSVNDKVVVYDRMRENMRLYKSKTLREIIDMSINQVLVRCIYTSMTTFLCMFPMAIWGGSAVHNFAVP MLFGIVIATSSSIFIAAPILLLLGDWWQRHKAAHKTAEEGAIAQK
Specific function: Involved in protein export [H]
COG id: COG0342
COG function: function code U; Preprotein translocase subunit SecD
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secD/secF family. SecD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786609, Length=526, Percent_Identity=35.7414448669202, Blast_Score=291, Evalue=1e-79, Organism=Escherichia coli, GI1786610, Length=301, Percent_Identity=33.5548172757475, Blast_Score=186, Evalue=5e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005791 - InterPro: IPR022813 - InterPro: IPR022646 - InterPro: IPR022645 - InterPro: IPR005665 [H]
Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]
EC number: NA
Molecular weight: Translated: 92030; Mature: 92030
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSKWVVALYSLVVLIGIIIALPNFFTQKQLDALPSWLPKRQVTLGLDLRGGSYLVLEV CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEE DAAALKKDRLRTLLDDARSKLRADRIQPQSIRVVGDAVVVTIPDADQRAKAETALRTLIS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCHHHHHHHHHHHHHH QVNTSGFGTAINDIDVTENDNNQIRLTLTEAGFNYRLDSALQQSLEIIRQRVDQVGVAEP HHCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC SIQRVGSDRIVVQLPGLQDPAQLRQLLGSTAKMSFHMVADANPNDPPPPGVTIMPDSKNP HHHHCCCCEEEEEECCCCCHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEEEEECCCCC AIKYPIEDQVALSGERLTDARAGFDPRTNEPIVSFRFDSLGARQFADITTKNVNRPFAIV EEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEE LDGKVLSAPVIREPITGGSGQISGSFTVQDTVILSALLRAGALPAPLTVIEERTVGPDLG ECCCCCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC GDAIKMGLMTGIIGFLLVAVFILLLYGFWGVIANVALLLHTLLTFSALSLIGATLTLPGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIILGIGIAVDANILINERIREETRKGLGAMAALDKGFHSAFATIVDANVTTLTATILL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FLFGTGPVRGFAVTMMLGIAISMFTDVTLVRMIMAWFVRRRKLKVLHIEPFLKFVPEHTN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCC FRFMNARFIGIGVSIVLSIASIILFFKPGLNYGIDFKGGIQAEISTSQPADLAQLRAKLG EEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHC ALNLGEVALQTAGSPNQVLIRVQRQEGGEEAQTAAVNKMREAVTELDPGVKIERTEVVGP CCCCCHHHHHCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC KVSGELARSGMIAVILSAVVMLFYIWWRFEWFFALGAIATLILDTTKIIGFFALTQLDFN CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LTAIAALLTIIGYSVNDKVVVYDRMRENMRLYKSKTLREIIDMSINQVLVRCIYTSMTTF HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCMFPMAIWGGSAVHNFAVPMLFGIVIATSSSIFIAAPILLLLGDWWQRHKAAHKTAEEG HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AIAQK CCCCC >Mature Secondary Structure MRTSKWVVALYSLVVLIGIIIALPNFFTQKQLDALPSWLPKRQVTLGLDLRGGSYLVLEV CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEE DAAALKKDRLRTLLDDARSKLRADRIQPQSIRVVGDAVVVTIPDADQRAKAETALRTLIS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCHHHHHHHHHHHHHH QVNTSGFGTAINDIDVTENDNNQIRLTLTEAGFNYRLDSALQQSLEIIRQRVDQVGVAEP HHCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC SIQRVGSDRIVVQLPGLQDPAQLRQLLGSTAKMSFHMVADANPNDPPPPGVTIMPDSKNP HHHHCCCCEEEEEECCCCCHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEEEEECCCCC AIKYPIEDQVALSGERLTDARAGFDPRTNEPIVSFRFDSLGARQFADITTKNVNRPFAIV EEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEE LDGKVLSAPVIREPITGGSGQISGSFTVQDTVILSALLRAGALPAPLTVIEERTVGPDLG ECCCCCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC GDAIKMGLMTGIIGFLLVAVFILLLYGFWGVIANVALLLHTLLTFSALSLIGATLTLPGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIILGIGIAVDANILINERIREETRKGLGAMAALDKGFHSAFATIVDANVTTLTATILL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FLFGTGPVRGFAVTMMLGIAISMFTDVTLVRMIMAWFVRRRKLKVLHIEPFLKFVPEHTN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCC FRFMNARFIGIGVSIVLSIASIILFFKPGLNYGIDFKGGIQAEISTSQPADLAQLRAKLG EEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHC ALNLGEVALQTAGSPNQVLIRVQRQEGGEEAQTAAVNKMREAVTELDPGVKIERTEVVGP CCCCCHHHHHCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC KVSGELARSGMIAVILSAVVMLFYIWWRFEWFFALGAIATLILDTTKIIGFFALTQLDFN CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LTAIAALLTIIGYSVNDKVVVYDRMRENMRLYKSKTLREIIDMSINQVLVRCIYTSMTTF HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCMFPMAIWGGSAVHNFAVPMLFGIVIATSSSIFIAAPILLLLGDWWQRHKAAHKTAEEG HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AIAQK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9826342 [H]