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The map label for this gene is glxA [H]

Identifier: 225852808

GI number: 225852808

Start: 1296963

End: 1297961

Strand: Direct

Name: glxA [H]

Synonym: BMEA_A1365

Alternate gene names: 225852808

Gene position: 1296963-1297961 (Clockwise)

Preceding gene: 225852805

Following gene: 225852812

Centisome position: 61.01

GC content: 57.56

Gene sequence:

>999_bases
ATGAACCAGAATTCTTTGGTCAAGCGGTCTATTGTCTTTTTTCTCGTTCCAAACTTTTCGATGATTGCGTTTGCGACAGC
GATCGAACCATTGCGCATCGCAAACCAGATGCTGGGCTATGATGCCTATCAGTGGCGCCTGACATCGGTTGACGGAAAGC
CGGTGACGGCCTCGAACGGTGTGGAATGCGCGGTCAATGCTTCGCTGGAAGACGAACGCCGCTATCTCCAGCGCGAACAG
CGTCCCTCGATGGTTTTCGTCTGTTCGGGCGTCCATGTCGAAGAATTCCGCAACAAATCCGTCTTTGCCTGGCTGCGCGA
GGAATATAATCGCGGCGTGGCGGTTGGCGGGCTATGCACCGGCGCACATATTCTGGCGGCAGCCGGGCTTCTCTCCGGCA
GGCGTTGCGCCATCCATTGGGAAAACCTGCCGGGCTTTTCCGAGGCTTTCCCCAAGGCGGAGGTCTATGCCGACCTGTTT
GAAGTGGACAGCAATCTCTACACCTGCGCGGGCGGAACGGCTTCTCTCGATATGATGCTGAAGCTTATCGGCGATGATTT
CGACGCCAATCTCGTGAATAAAATCTGCGAACAGGCACTGACGGATCGTGTCCGCAGCCCGCAGGATCGCCAGCGCCTGC
CGCTGCGCGCGCGCCTCGGCATCCAGAATTCAAAAGTTCTCACCATCATCGAAATGATGGAAGCCAACCTTTCCGAGCCG
CAGGCGCTCATCAACGTGGCGCATACGATCGGCCTCTCGCGCCGTCAGGTGGAGCGCCTGTTCCGGCAGGAAATGGGCCG
TTCGCCTGCCCGTTATTATCTCGAAATCCGCCTCGACCGCGCACGCCATCTCCTGCTGCAATCCTCCATGCCTGTCGTGG
AAGTTGCTGTCGCCTGCGGCTTCGTTTCAGCGTCGCATTTTTCCAAATGCTACCGCGAACTTTACGGGCGTTCGCCACAA
CAGGAGCGCGCTGAGCGCAAAATACTTGTTGCAGCCTGA

Upstream 100 bases:

>100_bases
CCGGGATGGAAATTTTGCCCGGTGTCGTGACGGAGACACAAAGCTGAAAACTGCGTCAGGAACCGCAGTTCAGGCTTTCA
CAAATGGGATTGATCGGGCT

Downstream 100 bases:

>100_bases
CCCACCGGATTGAGGTTTCGGGAAAGCTTAACACCACGAAAAATCAAGGCCATAGAAAGCTTTTCGGAATCAATTCCGCA
ACTTCGCCCTGCAAGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNQNSLVKRSIVFFLVPNFSMIAFATAIEPLRIANQMLGYDAYQWRLTSVDGKPVTASNGVECAVNASLEDERRYLQREQ
RPSMVFVCSGVHVEEFRNKSVFAWLREEYNRGVAVGGLCTGAHILAAAGLLSGRRCAIHWENLPGFSEAFPKAEVYADLF
EVDSNLYTCAGGTASLDMMLKLIGDDFDANLVNKICEQALTDRVRSPQDRQRLPLRARLGIQNSKVLTIIEMMEANLSEP
QALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLLQSSMPVVEVAVACGFVSASHFSKCYRELYGRSPQ
QERAERKILVAA

Sequences:

>Translated_332_residues
MNQNSLVKRSIVFFLVPNFSMIAFATAIEPLRIANQMLGYDAYQWRLTSVDGKPVTASNGVECAVNASLEDERRYLQREQ
RPSMVFVCSGVHVEEFRNKSVFAWLREEYNRGVAVGGLCTGAHILAAAGLLSGRRCAIHWENLPGFSEAFPKAEVYADLF
EVDSNLYTCAGGTASLDMMLKLIGDDFDANLVNKICEQALTDRVRSPQDRQRLPLRARLGIQNSKVLTIIEMMEANLSEP
QALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLLQSSMPVVEVAVACGFVSASHFSKCYRELYGRSPQ
QERAERKILVAA
>Mature_332_residues
MNQNSLVKRSIVFFLVPNFSMIAFATAIEPLRIANQMLGYDAYQWRLTSVDGKPVTASNGVECAVNASLEDERRYLQREQ
RPSMVFVCSGVHVEEFRNKSVFAWLREEYNRGVAVGGLCTGAHILAAAGLLSGRRCAIHWENLPGFSEAFPKAEVYADLF
EVDSNLYTCAGGTASLDMMLKLIGDDFDANLVNKICEQALTDRVRSPQDRQRLPLRARLGIQNSKVLTIIEMMEANLSEP
QALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLLQSSMPVVEVAVACGFVSASHFSKCYRELYGRSPQ
QERAERKILVAA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=104, Percent_Identity=32.6923076923077, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI226510985, Length=98, Percent_Identity=34.6938775510204, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37338; Mature: 37338

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNSLVKRSIVFFLVPNFSMIAFATAIEPLRIANQMLGYDAYQWRLTSVDGKPVTASNG
CCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCC
VECAVNASLEDERRYLQREQRPSMVFVCSGVHVEEFRNKSVFAWLREEYNRGVAVGGLCT
CEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHCCCEEECCHHH
GAHILAAAGLLSGRRCAIHWENLPGFSEAFPKAEVYADLFEVDSNLYTCAGGTASLDMML
HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
KLIGDDFDANLVNKICEQALTDRVRSPQDRQRLPLRARLGIQNSKVLTIIEMMEANLSEP
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCH
QALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLLQSSMPVVEVAVACG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCCCHHHHHHHHH
FVSASHFSKCYRELYGRSPQQERAERKILVAA
HHHHHHHHHHHHHHHCCCCHHHHHHCCEEECC
>Mature Secondary Structure
MNQNSLVKRSIVFFLVPNFSMIAFATAIEPLRIANQMLGYDAYQWRLTSVDGKPVTASNG
CCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCC
VECAVNASLEDERRYLQREQRPSMVFVCSGVHVEEFRNKSVFAWLREEYNRGVAVGGLCT
CEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHCCCEEECCHHH
GAHILAAAGLLSGRRCAIHWENLPGFSEAFPKAEVYADLFEVDSNLYTCAGGTASLDMML
HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
KLIGDDFDANLVNKICEQALTDRVRSPQDRQRLPLRARLGIQNSKVLTIIEMMEANLSEP
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCH
QALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLLQSSMPVVEVAVACG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCCCHHHHHHHHH
FVSASHFSKCYRELYGRSPQQERAERKILVAA
HHHHHHHHHHHHHHHCCCCHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]