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The map label for this gene is yajC

Identifier: 225852403

GI number: 225852403

Start: 884795

End: 885136

Strand: Direct

Name: yajC

Synonym: BMEA_A0929

Alternate gene names: 225852403

Gene position: 884795-885136 (Clockwise)

Preceding gene: 225852401

Following gene: 225852404

Centisome position: 41.62

GC content: 54.39

Gene sequence:

>342_bases
ATGTTCGTAACACCGGCTTTCGCTCAAGCATCCGGCAGCGTTGTTGGACCAGATATGCTCATGAGCATCCTGCCGTTCAT
CCTGATCTTCGTCATCATGTACTTTCTCATCATCCGCCCGCAGCGGACCCAGATGAAGAAGCGTCAGGAAATGCTGAACT
CCGTGCGTCGTGGCGATACGGTCGTGACGGGTGGCGGCATCGTCGGCAAGGTTCTCAAGGTTGTCGATGACAACGAACTC
GAACTCGAAATTGCCGATGGCGTTCGTATTCGCGTTGTGCGTGCCACCTTGATGGATGTGCGCGTGAAGGGCGAACCTGT
CGCCGACAACAAGAACAAATAA

Upstream 100 bases:

>100_bases
GCGACCTTGGCGCAGGCGGGTTCATCGCCGGTTGCAATTGAAGCACCAACCATTGTAATGCCGTTAATAATTTGTCTTCG
TGACTTCAGAGGAGTTCCTA

Downstream 100 bases:

>100_bases
TCTCTTTTTTTTGAAAGAGCAGGCGGGCTCCGGTAAGGTTTAAATAACCTGAGCCCGTTCATTATGCAGCACGCGCGCAA
AATCGCGTTTGCGTGCAAAT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MFVTPAFAQASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVGKVLKVVDDNEL
ELEIADGVRIRVVRATLMDVRVKGEPVADNKNK

Sequences:

>Translated_113_residues
MFVTPAFAQASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVGKVLKVVDDNEL
ELEIADGVRIRVVRATLMDVRVKGEPVADNKNK
>Mature_113_residues
MFVTPAFAQASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVGKVLKVVDDNEL
ELEIADGVRIRVVRATLMDVRVKGEPVADNKNK

Specific function: Not known; elicits an immunogenic response in mice

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family

Homologues:

Organism=Escherichia coli, GI1786608, Length=103, Percent_Identity=31.0679611650485, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YAJC_BRUA2 (Q2YNM1)

Other databases:

- EMBL:   AF085217
- EMBL:   AM040264
- RefSeq:   YP_414334.1
- ProteinModelPortal:   Q2YNM1
- SMR:   Q2YNM1
- STRING:   Q2YNM1
- GeneID:   3787581
- GenomeReviews:   AM040264_GR
- KEGG:   bmf:BAB1_0909
- eggNOG:   COG1862
- HOGENOM:   HBG730023
- OMA:   QKSAIAK
- ProtClustDB:   CLSK898317
- BioCyc:   BMEL359391:BAB1_0909-MONOMER
- InterPro:   IPR003849
- PRINTS:   PR01853
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 12560; Mature: 12560

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21c419b8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTPAFAQASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDT
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE
VVTGGGIVGKVLKVVDDNELELEIADGVRIRVVRATLMDVRVKGEPVADNKNK
EEECCHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHHHHEECCCCCCCCCCH
>Mature Secondary Structure
MFVTPAFAQASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDT
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE
VVTGGGIVGKVLKVVDDNELELEIADGVRIRVVRATLMDVRVKGEPVADNKNK
EEECCHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHHHHEECCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342