Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 225852392

GI number: 225852392

Start: 875671

End: 876522

Strand: Direct

Name: scpA [H]

Synonym: BMEA_A0918

Alternate gene names: 225852392

Gene position: 875671-876522 (Clockwise)

Preceding gene: 225852391

Following gene: 225852393

Centisome position: 41.19

GC content: 61.03

Gene sequence:

>852_bases
TTGGCAGCATCGGATGCACATACAGGTGGAAACGACGGCACACGCGTGCCGATGGATACCCTGTGGCAAAATGAGGCCGG
GCGAGGCGCAGGCGAGCCGTCACTGCTGATCGATGTGCAGGGCTTTGAAGGTCCGCTCGACCTTCTTCTGCATCTTGCGC
GTAACCAGCGCGTCGATCTTGCGCGCATTTCCGTGCTGGCGCTTGCCGAACAATATCTCGGTTTCGTGGAGCAGGCGCGC
GCGCTGCGTCTGGAGCTTGCCGCCGATTATCTCGTTATGGCGGCATGGCTTGCCTATCTGAAATCCAAGCTGCTGATCCC
GAAGCAGCAGGGCGACGATGGCGCCACGGGCGAGGAACTCGTTGCCTCCCTGCAATTCCGGTTGAAACGGCTTGAAGCCA
TGCGCGATGCGGCGGCGGCACTCGTCAATCGTCATCGGCTCGGCCGCGATGTTTTCCCGCGCGGCATGCCGGAAATGGTG
GTGGTGGACCGCGCCAGCCGTTTTTCCGCAACGCTTTACGATCTGCTTAGCGCCTATGCGTCGCAGCGCCAGCGCCAGGC
GGTTTCCCAGGTACAGATAGAAAAACGCAGCGTCTGGTCCCTCAAGGAGGCACGCACGGCGCTTGTGCGCCTGATGGGCG
CGGTGGGCGACTGGGTTTCGCTGGACCGTTTTTTGATCGATTATGCACTTTCTCCGCAGGAGAGGGCGTCGGCGCTTGCC
AGTTCTTTCGCCGCATGCCTCGAGCTGGTGCGCGAAGGCAAGCTTGAAGTACGCCAGAACGCTCCGTTCGAGCCGATCTA
TATGCGCGCGACCCGCGAACTCGATGAATTCGATGAGGACGAAAATGCCTGA

Upstream 100 bases:

>100_bases
CAATGCCATGTTTGAACCGATAGCGTAATCGGCAAAACTTGATAAACTTGTTCCTGCTGGCAGAATCTGTGCCGGCAGGG
GCAACAGCAGGACGACAGGC

Downstream 100 bases:

>100_bases
AGCAGAGCGCCGCGATTTGATGGATATGGAAGGCGTTGGGGAAGAAGAGCAGGCGGGGCCTGCCTCGCCGGTGACGCTTG
CCGAGCTTGCCCGCATTGTG

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MAASDAHTGGNDGTRVPMDTLWQNEAGRGAGEPSLLIDVQGFEGPLDLLLHLARNQRVDLARISVLALAEQYLGFVEQAR
ALRLELAADYLVMAAWLAYLKSKLLIPKQQGDDGATGEELVASLQFRLKRLEAMRDAAAALVNRHRLGRDVFPRGMPEMV
VVDRASRFSATLYDLLSAYASQRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLIDYALSPQERASALA
SSFAACLELVREGKLEVRQNAPFEPIYMRATRELDEFDEDENA

Sequences:

>Translated_283_residues
MAASDAHTGGNDGTRVPMDTLWQNEAGRGAGEPSLLIDVQGFEGPLDLLLHLARNQRVDLARISVLALAEQYLGFVEQAR
ALRLELAADYLVMAAWLAYLKSKLLIPKQQGDDGATGEELVASLQFRLKRLEAMRDAAAALVNRHRLGRDVFPRGMPEMV
VVDRASRFSATLYDLLSAYASQRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLIDYALSPQERASALA
SSFAACLELVREGKLEVRQNAPFEPIYMRATRELDEFDEDENA
>Mature_282_residues
AASDAHTGGNDGTRVPMDTLWQNEAGRGAGEPSLLIDVQGFEGPLDLLLHLARNQRVDLARISVLALAEQYLGFVEQARA
LRLELAADYLVMAAWLAYLKSKLLIPKQQGDDGATGEELVASLQFRLKRLEAMRDAAAALVNRHRLGRDVFPRGMPEMVV
VDRASRFSATLYDLLSAYASQRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLIDYALSPQERASALAS
SFAACLELVREGKLEVRQNAPFEPIYMRATRELDEFDEDENA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31476; Mature: 31345

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASDAHTGGNDGTRVPMDTLWQNEAGRGAGEPSLLIDVQGFEGPLDLLLHLARNQRVDL
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHH
ARISVLALAEQYLGFVEQARALRLELAADYLVMAAWLAYLKSKLLIPKQQGDDGATGEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VASLQFRLKRLEAMRDAAAALVNRHRLGRDVFPRGMPEMVVVDRASRFSATLYDLLSAYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCHHHHHHHHHHHHHHHH
SQRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLIDYALSPQERASALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSFAACLELVREGKLEVRQNAPFEPIYMRATRELDEFDEDENA
HHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AASDAHTGGNDGTRVPMDTLWQNEAGRGAGEPSLLIDVQGFEGPLDLLLHLARNQRVDL
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHH
ARISVLALAEQYLGFVEQARALRLELAADYLVMAAWLAYLKSKLLIPKQQGDDGATGEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VASLQFRLKRLEAMRDAAAALVNRHRLGRDVFPRGMPEMVVVDRASRFSATLYDLLSAYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCHHHHHHHHHHHHHHHH
SQRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLIDYALSPQERASALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSFAACLELVREGKLEVRQNAPFEPIYMRATRELDEFDEDENA
HHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]