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The map label for this gene is 225852294

Identifier: 225852294

GI number: 225852294

Start: 783995

End: 784537

Strand: Direct

Name: 225852294

Synonym: BMEA_A0817

Alternate gene names: NA

Gene position: 783995-784537 (Clockwise)

Preceding gene: 225852293

Following gene: 225852299

Centisome position: 36.88

GC content: 58.01

Gene sequence:

>543_bases
ATGATGGACAAGAGCCCTGATGCATTCAGGACGATCAGCGAAGTTGCGGAGGACCTCGACCTGCCGCAGCATGTGCTGCG
TTTTTGGGAAACCCGCTTTACCCAGATCAAGCCCATGAAGCGCGGGGGCGGGCGTCGTTATTACCGCCCGCTTGATGTCG
AGCTTCTCAAGGGCATTCGCCATCTGCTTTACGATCAGGGCTATACCATCAAGGGTGTGCAGCGCCTTCTGCGCGAAAAC
AACGCACAGTTCATCATCGCATTGGGCAATGGTGATGTGCAGGCCATCGAGGCCATTACGCGCCAGAAGCAGATCGCAGC
GGAAAAACGCGCCGCCGAGGAAGCCGCCGATAATGAAATGGCCTTGCCGAGCGGCATCAAGGCGCCGCAGCCGGCCCGCA
AATTGTTCGGGCTGTTGAAGGGTGAGGAAGATGGCCCGATCGGGGCGGATGGCAGGCGTCCGTCAAAGGATAATCGTGCG
CTTTTGCAGGAAGCCCTTTTTGACCTTCTGGAATGCAAGCGGCTTCTGGATCAGGTTCGCTGA

Upstream 100 bases:

>100_bases
TCATGGTTTTGGCTGTAGGCCTGAGATGCGCGCAGCCGGTTGAACGATCTGAATTGGCAAGTTGCGCCTGTCGGTGAAAT
GGAACCACTGGAAAGGGCAG

Downstream 100 bases:

>100_bases
ATATTATGCAGATTGAATGAAGGGAGGCTGATGCCTCCCTTTTTGCATTTTATGTGGAAGACAGTTTCAGTCCGATAATG
CCTGCAAGAATAAGCGCGAC

Product: MerR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MMDKSPDAFRTISEVAEDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRPLDVELLKGIRHLLYDQGYTIKGVQRLLREN
NAQFIIALGNGDVQAIEAITRQKQIAAEKRAAEEAADNEMALPSGIKAPQPARKLFGLLKGEEDGPIGADGRRPSKDNRA
LLQEALFDLLECKRLLDQVR

Sequences:

>Translated_180_residues
MMDKSPDAFRTISEVAEDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRPLDVELLKGIRHLLYDQGYTIKGVQRLLREN
NAQFIIALGNGDVQAIEAITRQKQIAAEKRAAEEAADNEMALPSGIKAPQPARKLFGLLKGEEDGPIGADGRRPSKDNRA
LLQEALFDLLECKRLLDQVR
>Mature_180_residues
MMDKSPDAFRTISEVAEDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRPLDVELLKGIRHLLYDQGYTIKGVQRLLREN
NAQFIIALGNGDVQAIEAITRQKQIAAEKRAAEEAADNEMALPSGIKAPQPARKLFGLLKGEEDGPIGADGRRPSKDNRA
LLQEALFDLLECKRLLDQVR

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 20411; Mature: 20411

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKSPDAFRTISEVAEDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRPLDVELLKGIR
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHH
HLLYDQGYTIKGVQRLLRENNAQFIIALGNGDVQAIEAITRQKQIAAEKRAAEEAADNEM
HHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALPSGIKAPQPARKLFGLLKGEEDGPIGADGRRPSKDNRALLQEALFDLLECKRLLDQVR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDKSPDAFRTISEVAEDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRPLDVELLKGIR
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHH
HLLYDQGYTIKGVQRLLRENNAQFIIALGNGDVQAIEAITRQKQIAAEKRAAEEAADNEM
HHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALPSGIKAPQPARKLFGLLKGEEDGPIGADGRRPSKDNRALLQEALFDLLECKRLLDQVR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]