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The map label for this gene is yfiA

Identifier: 225851693

GI number: 225851693

Start: 176929

End: 177522

Strand: Direct

Name: yfiA

Synonym: BMEA_A0166

Alternate gene names: NA

Gene position: 176929-177522 (Clockwise)

Preceding gene: 225851691

Following gene: 225851694

Centisome position: 8.32

GC content: 58.75

Gene sequence:

>594_bases
ATGACTCTGCGTGTATCTGGAAAGCATATGGACGTCGGTGAAGCTTTCACGAGCCGGATCGTTGATCGGGTGAATGATGC
TGTCGACAAATATTTCGATCATGGCTTTTCTGGACAGGTAACGGTCGCCAAGTCCGGTTCGCGGTTCAGTGCGGATTGCA
CGTTGCACCTTGATAGCGGTGCGACACTGCAAAGCGCTGGCGAGGCGCAGGATCCGCAACTGGCGTTCGACATGGCCGCG
GACAAGATCGAGACCCGGCTTCGCCGTTACAAGCGCCGTCTGAAGTCGCGTGCACCTGCACAGCAAAATGCGATCTATGA
CGACGTGGCATATCGTGTTATGGCACCGCTGCCGGAAGAGGAGGAGGACCTTCCGGCTGATTACGCACCGACCATCGTTG
CGGAATCGTCCGTCGCCCTGCGCACCATGTCGGTGGCATCGGCGGTCGTGGAGCTTGACCTGACCGAACATCCGGTTCTG
GTGTTCCGGAATGCGGGCAATGATGAAGTTAACATCGTCTACCGTCGCGCGGACGGCAATATCGGCTGGGTTGATCCATC
GACTGTCACCCGCCAGGCCGCGCCACGCGCCTGA

Upstream 100 bases:

>100_bases
CGCCCACGACAAAAGCCATCTTTGATGCTCGTTCGCTTTGCGCTTCGCTCGCCTTGTGATTAGACTGAGTCCCGTGGTGT
AACGCAAATGAGGTGGACCA

Downstream 100 bases:

>100_bases
TGGCAAACCAGAAGCGCACGGGAGCGTAAAGCCTGAAGGCGGCTTGCGTGCGCTTCCCAAAACCGGGCCGTAACCGGCCT
GACTGAAGAAGGAACGGAGA

Product: ribosomal subunit interface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTLRVSGKHMDVGEAFTSRIVDRVNDAVDKYFDHGFSGQVTVAKSGSRFSADCTLHLDSGATLQSAGEAQDPQLAFDMAA
DKIETRLRRYKRRLKSRAPAQQNAIYDDVAYRVMAPLPEEEEDLPADYAPTIVAESSVALRTMSVASAVVELDLTEHPVL
VFRNAGNDEVNIVYRRADGNIGWVDPSTVTRQAAPRA

Sequences:

>Translated_197_residues
MTLRVSGKHMDVGEAFTSRIVDRVNDAVDKYFDHGFSGQVTVAKSGSRFSADCTLHLDSGATLQSAGEAQDPQLAFDMAA
DKIETRLRRYKRRLKSRAPAQQNAIYDDVAYRVMAPLPEEEEDLPADYAPTIVAESSVALRTMSVASAVVELDLTEHPVL
VFRNAGNDEVNIVYRRADGNIGWVDPSTVTRQAAPRA
>Mature_196_residues
TLRVSGKHMDVGEAFTSRIVDRVNDAVDKYFDHGFSGQVTVAKSGSRFSADCTLHLDSGATLQSAGEAQDPQLAFDMAAD
KIETRLRRYKRRLKSRAPAQQNAIYDDVAYRVMAPLPEEEEDLPADYAPTIVAESSVALRTMSVASAVVELDLTEHPVLV
FRNAGNDEVNIVYRRADGNIGWVDPSTVTRQAAPRA

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21628; Mature: 21497

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRVSGKHMDVGEAFTSRIVDRVNDAVDKYFDHGFSGQVTVAKSGSRFSADCTLHLDSG
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECEEEEEECCC
ATLQSAGEAQDPQLAFDMAADKIETRLRRYKRRLKSRAPAQQNAIYDDVAYRVMAPLPEE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCC
EEDLPADYAPTIVAESSVALRTMSVASAVVELDLTEHPVLVFRNAGNDEVNIVYRRADGN
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEEEEEEECCCC
IGWVDPSTVTRQAAPRA
EECCCCCHHHCCCCCCC
>Mature Secondary Structure 
TLRVSGKHMDVGEAFTSRIVDRVNDAVDKYFDHGFSGQVTVAKSGSRFSADCTLHLDSG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECEEEEEECCC
ATLQSAGEAQDPQLAFDMAADKIETRLRRYKRRLKSRAPAQQNAIYDDVAYRVMAPLPEE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCC
EEDLPADYAPTIVAESSVALRTMSVASAVVELDLTEHPVLVFRNAGNDEVNIVYRRADGN
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEEEEEEECCCC
IGWVDPSTVTRQAAPRA
EECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 3034856 [H]