| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630969
Identifier: 225630969
GI number: 225630969
Start: 1379887
End: 1380561
Strand: Direct
Name: 225630969
Synonym: WRi_012910
Alternate gene names: NA
Gene position: 1379887-1380561 (Clockwise)
Preceding gene: 225630962
Following gene: 225630970
Centisome position: 95.44
GC content: 29.93
Gene sequence:
>675_bases ATGTACAATGTATATACTTTTTATATAATTGAAAATAGCTTTTTACTAGTATTCATTATGGGCAAGACTCTCATCTACTT AATCGGCTTTCCAGGCAGTGGTAAGTTTACTACTGCAAAGGAACTGTGTAAAATCATTGGTGCAGTAATAGTAAGCAATA ATCTATTCAATAATATTATATTTGATATTGTTAAATTACAAAACGCTGAAGTTCCAGATGACCTATGGGAAAAAATTTTT GCAGTTAGGGAAAATGTATTAGCAATACTGGAAAAACACTACGTAAAATCAAAACATTATATATTTACAAATGAATTGAT AGAGGGTGATCCCTATGACCAAAGATTATATAACTCAGTGGTAAATTTAAGTAAAAAAATGGACATGGAAATTTTTTCTG TAGTATTACATTGTAATAATGAAAAACTAGTAAGACGTGTCCAATCAGAAGAGAGATATCAGGAAAATAAAATTACTGAT CCGGATTTTGCTATAAAGAAAATTGAAGGGAAAAGGCTATTTATACCTCAGGGTTCGCTTGAAATTGATAACTCGAACTT GAGTGCAAAGGAAGTTGCAAAGAAAATTGTTGAAGAGATGAAGAAAGAAAAAAATGGAAAATTAATTAAAACTTCTGTAA CAAATCATTTAAAAACAGAGCGTACTCGTGGTTGA
Upstream 100 bases:
>100_bases TTTATAATTATATACTCAAAATTTCTAAATATGAACTATTTTCAACGCAGTTACTTGTTAAAGGTATTACCTGCATCTAT TTTATCATCATGTTTTTAGC
Downstream 100 bases:
>100_bases GCAGAAAGATAAGTACCGTCCTTGTGTTGGCATAATGCTATTTAACAGACAAGGACATGCCTTTATTGGAAAACGCTTTG ATAGCGATTCTTACTGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MYNVYTFYIIENSFLLVFIMGKTLIYLIGFPGSGKFTTAKELCKIIGAVIVSNNLFNNIIFDIVKLQNAEVPDDLWEKIF AVRENVLAILEKHYVKSKHYIFTNELIEGDPYDQRLYNSVVNLSKKMDMEIFSVVLHCNNEKLVRRVQSEERYQENKITD PDFAIKKIEGKRLFIPQGSLEIDNSNLSAKEVAKKIVEEMKKEKNGKLIKTSVTNHLKTERTRG
Sequences:
>Translated_224_residues MYNVYTFYIIENSFLLVFIMGKTLIYLIGFPGSGKFTTAKELCKIIGAVIVSNNLFNNIIFDIVKLQNAEVPDDLWEKIF AVRENVLAILEKHYVKSKHYIFTNELIEGDPYDQRLYNSVVNLSKKMDMEIFSVVLHCNNEKLVRRVQSEERYQENKITD PDFAIKKIEGKRLFIPQGSLEIDNSNLSAKEVAKKIVEEMKKEKNGKLIKTSVTNHLKTERTRG >Mature_224_residues MYNVYTFYIIENSFLLVFIMGKTLIYLIGFPGSGKFTTAKELCKIIGAVIVSNNLFNNIIFDIVKLQNAEVPDDLWEKIF AVRENVLAILEKHYVKSKHYIFTNELIEGDPYDQRLYNSVVNLSKKMDMEIFSVVLHCNNEKLVRRVQSEERYQENKITD PDFAIKKIEGKRLFIPQGSLEIDNSNLSAKEVAKKIVEEMKKEKNGKLIKTSVTNHLKTERTRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25948; Mature: 25948
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNVYTFYIIENSFLLVFIMGKTLIYLIGFPGSGKFTTAKELCKIIGAVIVSNNLFNNII CCEEEEEEEEECCEEEEEEHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHH FDIVKLQNAEVPDDLWEKIFAVRENVLAILEKHYVKSKHYIFTNELIEGDPYDQRLYNSV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH VNLSKKMDMEIFSVVLHCNNEKLVRRVQSEERYQENKITDPDFAIKKIEGKRLFIPQGSL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCEEEECCCCE EIDNSNLSAKEVAKKIVEEMKKEKNGKLIKTSVTNHLKTERTRG EECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC >Mature Secondary Structure MYNVYTFYIIENSFLLVFIMGKTLIYLIGFPGSGKFTTAKELCKIIGAVIVSNNLFNNII CCEEEEEEEEECCEEEEEEHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHH FDIVKLQNAEVPDDLWEKIFAVRENVLAILEKHYVKSKHYIFTNELIEGDPYDQRLYNSV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH VNLSKKMDMEIFSVVLHCNNEKLVRRVQSEERYQENKITDPDFAIKKIEGKRLFIPQGSL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCEEEECCCCE EIDNSNLSAKEVAKKIVEEMKKEKNGKLIKTSVTNHLKTERTRG EECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA