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The map label for this gene is yrbD [C]

Identifier: 225630958

GI number: 225630958

Start: 1368465

End: 1368920

Strand: Reverse

Name: yrbD [C]

Synonym: WRi_012800

Alternate gene names: 225630958

Gene position: 1368920-1368465 (Counterclockwise)

Preceding gene: 225630959

Following gene: 225630957

Centisome position: 94.68

GC content: 33.77

Gene sequence:

>456_bases
ATGCGAAGGTCAAATATACTTGAAATAACCGCTGGATTATTTGTATTAATTTTTACTATTTTTCTGATTTTCTTTGCTAT
TGATAAGCTATCTTACATAAAGAAAAACTATAAGGATTGCTATAAAATATATGGTCTTTTTGCTAACGCTAACGGTATAG
GAGTTGGTGATAGTGTCAAGATCTCTGGTGTAGATGTTGGAAGCATAACTGGTGTATCACTTGACAAAGCTACCTACGTA
GCACGAATCGATATGTGTATAAGCAAAGACATAAAATTGCCAATTGATAGTTCAGCTCTGATCACTAGCAGTGGAGTTGT
TGGCAGTAAATTTGTTAATATATCACCTGGATCAGATATTAAACTAATCTTGCATGGTGGTAAAATAGAGTATACTCAAG
CTGAAGCAAATATGGGTGGAATAATGGACAGAATTCTTGGTATGTTTACAAAGTGA

Upstream 100 bases:

>100_bases
AAGTAAAACATACTCCTAATTTAACGGGTACAAAAGATGCATACTATCCAAACCAAAAAGTGAAAAATTACTATAAAAGC
TGGAGTCCTGATAACTAAAG

Downstream 100 bases:

>100_bases
AAATGGCAGGATTCCAAGTATATCCGTTCAGGTAAAGCCTCCTGTAGTTCTAAAGTATTTAAGGAGTTTGCCTTATTTCT
TGCCTTTTCTACCGCTTGCT

Product: ABC transporter, periplasmic substrate-binding protein

Products: NA

Alternate protein names: Mce-Related Protein; Mce Related Protein; Luene Transport System Ttg2C Protein; Luene Tolerance C; Organic Solvent Resistance Transport System Ttg2C Protein; Conserved Family Protein; Mce Related Family; Mce Family Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC Transporter; Cell Entry-Like Protein; Virulence Protein Transporter; Mammalian Cell Entry Related Protein

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRRSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSVKISGVDVGSITGVSLDKATYV
ARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSDIKLILHGGKIEYTQAEANMGGIMDRILGMFTK

Sequences:

>Translated_151_residues
MRRSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSVKISGVDVGSITGVSLDKATYV
ARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSDIKLILHGGKIEYTQAEANMGGIMDRILGMFTK
>Mature_151_residues
MRRSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSVKISGVDVGSITGVSLDKATYV
ARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSDIKLILHGGKIEYTQAEANMGGIMDRILGMFTK

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16328; Mature: 16328

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSVK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEE
ISGVDVGSITGVSLDKATYVARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSDI
EECEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCE
KLILHGGKIEYTQAEANMGGIMDRILGMFTK
EEEEECCEEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRRSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSVK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEE
ISGVDVGSITGVSLDKATYVARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSDI
EECEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCE
KLILHGGKIEYTQAEANMGGIMDRILGMFTK
EEEEECCEEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA