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The map label for this gene is sppA [H]

Identifier: 225630941

GI number: 225630941

Start: 1352918

End: 1354000

Strand: Reverse

Name: sppA [H]

Synonym: WRi_012630

Alternate gene names: 225630941

Gene position: 1354000-1352918 (Counterclockwise)

Preceding gene: 225630942

Following gene: 225630940

Centisome position: 93.65

GC content: 37.67

Gene sequence:

>1083_bases
GTGAGCTGGCTCAATAAACCGATGATGATAGAGCAAAGAAGCTTTGATTTATTGTCATTACATGCAGAGAAGCATCCAAC
GTTTAAAAATATAAAACATGCAGTAAGAAATAGTGAAAGGGGAATAAAAGTAATACCAATACATGGAATCTTGACGAAGA
AGTCAGAGGCTTTTGATGATGTGTTGGGGATGACATCGTATGAGAAGATACGTGAAGAGATAGAAGAAGCTTTAATAGAT
GAAGAAGTAGAAACAATAATTTTGGACATAGACAGCCCCGGAGGAGAAGTAAACAGTTTATTCGATCTTTCTGACTTTAT
TTACGAAGCAAGGGGATTAAAAAAGATCGTAGCAATAGCAAATGATGATGCGTATTCTGCGGCGTATGCAATAGCGTCAA
GTGCTGAAAAAGTATTGGTAACGAGAACTTCAGGAGTTGGAAGCATAGGAGTAATAGCAAGTCACATTGATCAAAGTGGA
TTTGATGAAAAGCAAGGGATAAAATATACAACTGTTTTTGCTGGAAGTCGAAAAAACGATTTAAACCCGCATGAGCCAAT
AACGTCTGAAAGTCTGGAAAGCTTACAAGAGGAAGTAGGCCGCCTGTATGAGATGTTTGTCGAGCTTGTAGCAAGAAATA
GGAATCTTTCCACGGAAACAATCAAATCAACGGAAGCAGGGCTATATTTTGGTGAGAAAGCAATAGAGATTGGACTTGCT
GATGAAGTAATAACATATTCTGAATTTATAGATAGGAGAAACAATATGAGTAAAGCTGAATTTAACTATAAGGGCCACAC
CATCGATGCTGATGAGTTAATGGAAGAATCAAAACGAATAGGTTATGAGAGGTGCCGCAAGGAAGTATTAGAGGTAATAC
GATTATGTAATTTATCAAAGATGCCAGAAAAGATAGGAGAATTTATTGAGCAGGATGTAAATGCAAAACAAGCCCAAGAA
ATATTAATGTCGATACTAGCAGAGAGAACAAAGAAGACAGAGATTTTGAGTACAATACCGCAAAGTACACCGGAAGACTT
GATGATGCAGGTAGCGAAAAGTCGAGCAAAATCGGGCATTTGA

Upstream 100 bases:

>100_bases
CGACCAAGAAATTGCTGAAGATCAAAGGCGTGCTAGTGAATTGGGTTTAAGTTTTGACTCGGACGTCAGTAGTTTTGATT
CTAATACGGAAATAATATAA

Downstream 100 bases:

>100_bases
TGGTAGCCTACTCTTAACCACGGTATATAATGCTAACATACGCCGCGGTAAAATAAAGTTGATCATCTTATAACCGCGGT
ATATAATGCTAACATACGCC

Product: minor capsid protein C, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSWLNKPMMIEQRSFDLLSLHAEKHPTFKNIKHAVRNSERGIKVIPIHGILTKKSEAFDDVLGMTSYEKIREEIEEALID
EEVETIILDIDSPGGEVNSLFDLSDFIYEARGLKKIVAIANDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIASHIDQSG
FDEKQGIKYTTVFAGSRKNDLNPHEPITSESLESLQEEVGRLYEMFVELVARNRNLSTETIKSTEAGLYFGEKAIEIGLA
DEVITYSEFIDRRNNMSKAEFNYKGHTIDADELMEESKRIGYERCRKEVLEVIRLCNLSKMPEKIGEFIEQDVNAKQAQE
ILMSILAERTKKTEILSTIPQSTPEDLMMQVAKSRAKSGI

Sequences:

>Translated_360_residues
MSWLNKPMMIEQRSFDLLSLHAEKHPTFKNIKHAVRNSERGIKVIPIHGILTKKSEAFDDVLGMTSYEKIREEIEEALID
EEVETIILDIDSPGGEVNSLFDLSDFIYEARGLKKIVAIANDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIASHIDQSG
FDEKQGIKYTTVFAGSRKNDLNPHEPITSESLESLQEEVGRLYEMFVELVARNRNLSTETIKSTEAGLYFGEKAIEIGLA
DEVITYSEFIDRRNNMSKAEFNYKGHTIDADELMEESKRIGYERCRKEVLEVIRLCNLSKMPEKIGEFIEQDVNAKQAQE
ILMSILAERTKKTEILSTIPQSTPEDLMMQVAKSRAKSGI
>Mature_359_residues
SWLNKPMMIEQRSFDLLSLHAEKHPTFKNIKHAVRNSERGIKVIPIHGILTKKSEAFDDVLGMTSYEKIREEIEEALIDE
EVETIILDIDSPGGEVNSLFDLSDFIYEARGLKKIVAIANDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGF
DEKQGIKYTTVFAGSRKNDLNPHEPITSESLESLQEEVGRLYEMFVELVARNRNLSTETIKSTEAGLYFGEKAIEIGLAD
EVITYSEFIDRRNNMSKAEFNYKGHTIDADELMEESKRIGYERCRKEVLEVIRLCNLSKMPEKIGEFIEQDVNAKQAQEI
LMSILAERTKKTEILSTIPQSTPEDLMMQVAKSRAKSGI

Specific function: Digestion of the cleaved signal peptides [H]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S49 family [H]

Homologues:

Organism=Escherichia coli, GI1787527, Length=184, Percent_Identity=29.3478260869565, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004635
- InterPro:   IPR002142 [H]

Pfam domain/function: PF01343 Peptidase_S49 [H]

EC number: 3.4.21.-

Molecular weight: Translated: 40482; Mature: 40350

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLNKPMMIEQRSFDLLSLHAEKHPTFKNIKHAVRNSERGIKVIPIHGILTKKSEAFDD
CCCCCCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH
VLGMTSYEKIREEIEEALIDEEVETIILDIDSPGGEVNSLFDLSDFIYEARGLKKIVAIA
HHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
NDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKND
CCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCC
LNPHEPITSESLESLQEEVGRLYEMFVELVARNRNLSTETIKSTEAGLYFGEKAIEIGLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCHHHEECCH
DEVITYSEFIDRRNNMSKAEFNYKGHTIDADELMEESKRIGYERCRKEVLEVIRLCNLSK
HHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
MPEKIGEFIEQDVNAKQAQEILMSILAERTKKTEILSTIPQSTPEDLMMQVAKSRAKSGI
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SWLNKPMMIEQRSFDLLSLHAEKHPTFKNIKHAVRNSERGIKVIPIHGILTKKSEAFDD
CCCCCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH
VLGMTSYEKIREEIEEALIDEEVETIILDIDSPGGEVNSLFDLSDFIYEARGLKKIVAIA
HHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
NDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKND
CCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCC
LNPHEPITSESLESLQEEVGRLYEMFVELVARNRNLSTETIKSTEAGLYFGEKAIEIGLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCHHHEECCH
DEVITYSEFIDRRNNMSKAEFNYKGHTIDADELMEESKRIGYERCRKEVLEVIRLCNLSK
HHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
MPEKIGEFIEQDVNAKQAQEILMSILAERTKKTEILSTIPQSTPEDLMMQVAKSRAKSGI
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10103244 [H]