Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630940

Identifier: 225630940

GI number: 225630940

Start: 1351342

End: 1352832

Strand: Reverse

Name: 225630940

Synonym: WRi_012620

Alternate gene names: NA

Gene position: 1352832-1351342 (Counterclockwise)

Preceding gene: 225630941

Following gene: 225630939

Centisome position: 93.57

GC content: 33.94

Gene sequence:

>1491_bases
ATGCTAACATACGCCGCGGTAAATTGTATGAGTGAACCAATAATTGGTAGAGAAAAAGAAACAGCGATTCTAGAAAATAA
GCTTCTTTCCCAATCAGCCGAGTTTATCGCAGTGTATGGTCGACGTCGTGTAGGAAAAACATACTTAATAAAACAATTTT
TTAGCAAGCGAGATGTAGTCCTATTTGAGCAGACAGGCCTTAACAAAGGTAAATTAAAGGCGCAGCTTGAGATCTTCGTA
GAATCATTGTCTAGAGCTTTTTACAATGGCATAAGAATGGCTGTACCTAAAAACTGGATGGATGCGTTACATCAATTAAC
TCTTTCGATTGATATATACAGAGATAAACAAGTTGTGATATTTTTTGATGAGTTGCCATGGCTTGCTGCAAGAAAATCTG
GATTCTTAGTAGCACTAGAACACTTTTGGAATGTATATTGGACATACCGGAAAAAACTTATATTGGTTGTTTGTGGTTCA
GCAGCTTCTTGGATGTTAGAAAATTTAATATATAATAAAGGAGGATTACATAATCGTATTACTGCAAGAATAGGATTACA
GCCTTTTAACTTACGTGAAACTAAAAAGTATTTAAGATATTTAGGAGTCAATCTTAACCATCAGCAGATATTACAGATCT
ATATGGCAATGGGAGGAATACCACATTACCTAAAAGAAATAAGTAAAGGATTGTCAGCGACACAAAATATTAATGAGATC
TGCTTTCAGAAGGAAGGTTTGTTATTTGATGAATTTGATATGCTATTCCACTCTTTGTATGAAGAACCAGAGACATATAT
AAATATTATTCGCACGATTGCAAAAAAGCCAAAAGGAATCAGCAGAAAAGAACTGATAAAAGCAACAAAAATCACTGAAG
GAGGGTACTTAACCACAAAACTAAGGAGTTTAGAAGAAGCGGGATTTATAGGAGATTTTTTACCACTGAATAAAGCAACA
AGAGGAGCATATTACAGGGTAATGGACGAATATGTGTTATTTTATCTAACGTGGATTGAACCATTCAGAGAAGTAATGAA
AAAGGCAATAACAAGAGATGTTCATTATTGGGAGTTAGCAATAAAAAAACCAGCTTGGCTAACATGGACAGGACAAGCAT
TTGAAGCAGTGTGTTTTAAACATGCCAATACGATTAGAAGAAAATTAAATATAGAGCATATGGGGTTTATATGTGGAGAT
TGGCAATATCACTCAGGGAAAAACAGTAAAGAAAGTGGTGCTCAGATAGACTTGGTGTTTGATCGAGAGGATGGATGTAC
GACACTTTGTGAAATAAAATACAGTGATAAGCCTTATACGATAACAAAAGAATATATAGAACAATTAAGAAAAAAAGAGG
CAATTTATAAAGAAAAAACTAGGTCAAAGAAACAAATATTTTGGGTACTTATTGCTGCGAACGGAGCAACTGAAAATCAG
TACTTGAAAGATATAATCAATAATGTGATCACATTAGAAGACTTATTTTAA

Upstream 100 bases:

>100_bases
AAATCGGGCATTTGATGGTAGCCTACTCTTAACCACGGTATATAATGCTAACATACGCCGCGGTAAAATAAAGTTGATCA
TCTTATAACCGCGGTATATA

Downstream 100 bases:

>100_bases
TTTAACATCGAAATTTCAGAAAAACTTACACAGCTTTTTTTGAGTAACAAATATAGGAGGGAAAAAATGACAAGTATAAC
AGAAGGAAATAATTTAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MLTYAAVNCMSEPIIGREKETAILENKLLSQSAEFIAVYGRRRVGKTYLIKQFFSKRDVVLFEQTGLNKGKLKAQLEIFV
ESLSRAFYNGIRMAVPKNWMDALHQLTLSIDIYRDKQVVIFFDELPWLAARKSGFLVALEHFWNVYWTYRKKLILVVCGS
AASWMLENLIYNKGGLHNRITARIGLQPFNLRETKKYLRYLGVNLNHQQILQIYMAMGGIPHYLKEISKGLSATQNINEI
CFQKEGLLFDEFDMLFHSLYEEPETYINIIRTIAKKPKGISRKELIKATKITEGGYLTTKLRSLEEAGFIGDFLPLNKAT
RGAYYRVMDEYVLFYLTWIEPFREVMKKAITRDVHYWELAIKKPAWLTWTGQAFEAVCFKHANTIRRKLNIEHMGFICGD
WQYHSGKNSKESGAQIDLVFDREDGCTTLCEIKYSDKPYTITKEYIEQLRKKEAIYKEKTRSKKQIFWVLIAANGATENQ
YLKDIINNVITLEDLF

Sequences:

>Translated_496_residues
MLTYAAVNCMSEPIIGREKETAILENKLLSQSAEFIAVYGRRRVGKTYLIKQFFSKRDVVLFEQTGLNKGKLKAQLEIFV
ESLSRAFYNGIRMAVPKNWMDALHQLTLSIDIYRDKQVVIFFDELPWLAARKSGFLVALEHFWNVYWTYRKKLILVVCGS
AASWMLENLIYNKGGLHNRITARIGLQPFNLRETKKYLRYLGVNLNHQQILQIYMAMGGIPHYLKEISKGLSATQNINEI
CFQKEGLLFDEFDMLFHSLYEEPETYINIIRTIAKKPKGISRKELIKATKITEGGYLTTKLRSLEEAGFIGDFLPLNKAT
RGAYYRVMDEYVLFYLTWIEPFREVMKKAITRDVHYWELAIKKPAWLTWTGQAFEAVCFKHANTIRRKLNIEHMGFICGD
WQYHSGKNSKESGAQIDLVFDREDGCTTLCEIKYSDKPYTITKEYIEQLRKKEAIYKEKTRSKKQIFWVLIAANGATENQ
YLKDIINNVITLEDLF
>Mature_496_residues
MLTYAAVNCMSEPIIGREKETAILENKLLSQSAEFIAVYGRRRVGKTYLIKQFFSKRDVVLFEQTGLNKGKLKAQLEIFV
ESLSRAFYNGIRMAVPKNWMDALHQLTLSIDIYRDKQVVIFFDELPWLAARKSGFLVALEHFWNVYWTYRKKLILVVCGS
AASWMLENLIYNKGGLHNRITARIGLQPFNLRETKKYLRYLGVNLNHQQILQIYMAMGGIPHYLKEISKGLSATQNINEI
CFQKEGLLFDEFDMLFHSLYEEPETYINIIRTIAKKPKGISRKELIKATKITEGGYLTTKLRSLEEAGFIGDFLPLNKAT
RGAYYRVMDEYVLFYLTWIEPFREVMKKAITRDVHYWELAIKKPAWLTWTGQAFEAVCFKHANTIRRKLNIEHMGFICGD
WQYHSGKNSKESGAQIDLVFDREDGCTTLCEIKYSDKPYTITKEYIEQLRKKEAIYKEKTRSKKQIFWVLIAANGATENQ
YLKDIINNVITLEDLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011579
- InterPro:   IPR004256
- InterPro:   IPR011335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]

EC number: NA

Molecular weight: Translated: 57833; Mature: 57833

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYAAVNCMSEPIIGREKETAILENKLLSQSAEFIAVYGRRRVGKTYLIKQFFSKRDVV
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHEECCCHHCCHHHHHHHHHCCCCEE
LFEQTGLNKGKLKAQLEIFVESLSRAFYNGIRMAVPKNWMDALHQLTLSIDIYRDKQVVI
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHEEEEEEECCEEEE
FFDELPWLAARKSGFLVALEHFWNVYWTYRKKLILVVCGSAASWMLENLIYNKGGLHNRI
EEECCCCHHHCCCCCEEEHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCCCCEE
TARIGLQPFNLRETKKYLRYLGVNLNHQQILQIYMAMGGIPHYLKEISKGLSATQNINEI
EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH
CFQKEGLLFDEFDMLFHSLYEEPETYINIIRTIAKKPKGISRKELIKATKITEGGYLTTK
HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCHHHH
LRSLEEAGFIGDFLPLNKATRGAYYRVMDEYVLFYLTWIEPFREVMKKAITRDVHYWELA
HHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
IKKPAWLTWTGQAFEAVCFKHANTIRRKLNIEHMGFICGDWQYHSGKNSKESGAQIDLVF
ECCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHCCEEEECCEECCCCCCCCCCCEEEEEE
DREDGCTTLCEIKYSDKPYTITKEYIEQLRKKEAIYKEKTRSKKQIFWVLIAANGATENQ
ECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHH
YLKDIINNVITLEDLF
HHHHHHHHHEEHHHCC
>Mature Secondary Structure
MLTYAAVNCMSEPIIGREKETAILENKLLSQSAEFIAVYGRRRVGKTYLIKQFFSKRDVV
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHEECCCHHCCHHHHHHHHHCCCCEE
LFEQTGLNKGKLKAQLEIFVESLSRAFYNGIRMAVPKNWMDALHQLTLSIDIYRDKQVVI
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHEEEEEEECCEEEE
FFDELPWLAARKSGFLVALEHFWNVYWTYRKKLILVVCGSAASWMLENLIYNKGGLHNRI
EEECCCCHHHCCCCCEEEHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCCCCEE
TARIGLQPFNLRETKKYLRYLGVNLNHQQILQIYMAMGGIPHYLKEISKGLSATQNINEI
EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH
CFQKEGLLFDEFDMLFHSLYEEPETYINIIRTIAKKPKGISRKELIKATKITEGGYLTTK
HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCHHHH
LRSLEEAGFIGDFLPLNKATRGAYYRVMDEYVLFYLTWIEPFREVMKKAITRDVHYWELA
HHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
IKKPAWLTWTGQAFEAVCFKHANTIRRKLNIEHMGFICGDWQYHSGKNSKESGAQIDLVF
ECCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHCCEEEECCEECCCCCCCCCCCEEEEEE
DREDGCTTLCEIKYSDKPYTITKEYIEQLRKKEAIYKEKTRSKKQIFWVLIAANGATENQ
ECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHH
YLKDIINNVITLEDLF
HHHHHHHHHEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]