| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630935
Identifier: 225630935
GI number: 225630935
Start: 1345769
End: 1347103
Strand: Reverse
Name: 225630935
Synonym: WRi_012560
Alternate gene names: NA
Gene position: 1347103-1345769 (Counterclockwise)
Preceding gene: 225630936
Following gene: 225630934
Centisome position: 93.17
GC content: 36.1
Gene sequence:
>1335_bases ATGACAAAAGCAAAAAGTAAATTAGAAATAGTGAATCCGAATGCATCAGGAATAGACATTGGTTCAGCCGTACACTATGT ATGCGTACCTGAGGGAAGAGATAAACAACGTGTTCAGAAATTTGGCTGCTTTACTGCAGACCTTCATAATTTGGCACGCT GGTTGAAGAAGTGCAAAGTTACAACTGTGGCAATGGAATCAACAGGAGTGTACTGGATTTCTTTATTTCAAATACTTGAA TCATATGAATTCGAGGTCAAGTTGGTAAATGCACGACATGTAAAGAATGTACCTGGCAGGAAGTCTGACGTTCAAGATTG CCAATGGCTTCAACAATTGCATAGCTACGGATTGCTTCGTGGATCATTTAGACCAGATAATCAGATGTGTGTATTGCGTA GTTATGTGCGGCAACGTAAAAAACTTACTGAGAGTGCATCCACGCATGTTCTGCGTATGCAGAAGGCATTAATTCAAATG AATATTCAATTACACAAGGTTATTAGCAATATTACTGGAGTGACTGGTATGAAAATCATTGAGGCTATAATTGAAGGCGA AAGAAATCCTGAGAAATTGGCTGAATTCAGAAGCTCGAATATAAAGAATGATAAAGCTACTATAGCAAAAGCATTAACAG GAGACTATAGAGAAGAACATTTGTTTGTATTAAAACAAGAACTTGAGCTATATAATATTTACCAGGAAAAAATAGCAGAG TGTGATGAAAATATAGAGAATTACTATAAAACATTTGAAACAAAATTCTGTGGAAATAAGCAATGTAGTAAAATAAAGAA TAGGTCTACAAAAAACAGGCCAAACTTTTCTATACATGAGGAATTGCATAGAGTAACAGGTATGGATTTCACTAAAGTTC CAGGGCTTGATGCATTAAGCATACAAACCATAATTTCAGAAACTGGTATAAATCACAATAAATGGCCAACAGAAAAGCAC TTTTCGTCGTGGTTGGGACTCAGTCCTGCTAATAAAATTACAGGAGAAAAAGTGTTTAGCACAAGAACGTGTAGAGTCAT TAATCGTGCTGCGAATGCATTTCGAATGGCTGCTCACTGTGTATCAAGAAGCAACAGCGGAATAGGTGCATATTGTAGAA GATTAAAGAAACGACTAGGTGCACCAAAAGCGATTACTGCTACGGCAAGGAAATTAGCATGTATCTTTTACAGTATGCTA AAGCATGGACAAGAGTATGTTGAGAAAGGGATTGACTACTATGAGAAACTATATAAGGAGAGAGTATTGAAAAATTTAAG CAAAAAGGCCAGTGAACTTGGTTATGTTTTAACAAAAAAACATGAACTAATATAG
Upstream 100 bases:
>100_bases GATGGAGTCTTTTAGACTACCTCGCTTAGAAGATTGTATAATCTAACCGTCCCCAAGCTGAAGCGCTTCTCCATTATAAG TTATATAGGAGGAATTTGAC
Downstream 100 bases:
>100_bases GGAGTTTGTTAGAAGTGATAGTTGATGGAACAGTCGAGGATTCCTCGGTGGTTGTAAGGTCACTGGCAGCGGAAATTACA AGGGTAGTGAATAAGAATAC
Product: transposase
Products: NA
Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTKAKSKLEIVNPNASGIDIGSAVHYVCVPEGRDKQRVQKFGCFTADLHNLARWLKKCKVTTVAMESTGVYWISLFQILE SYEFEVKLVNARHVKNVPGRKSDVQDCQWLQQLHSYGLLRGSFRPDNQMCVLRSYVRQRKKLTESASTHVLRMQKALIQM NIQLHKVISNITGVTGMKIIEAIIEGERNPEKLAEFRSSNIKNDKATIAKALTGDYREEHLFVLKQELELYNIYQEKIAE CDENIENYYKTFETKFCGNKQCSKIKNRSTKNRPNFSIHEELHRVTGMDFTKVPGLDALSIQTIISETGINHNKWPTEKH FSSWLGLSPANKITGEKVFSTRTCRVINRAANAFRMAAHCVSRSNSGIGAYCRRLKKRLGAPKAITATARKLACIFYSML KHGQEYVEKGIDYYEKLYKERVLKNLSKKASELGYVLTKKHELI
Sequences:
>Translated_444_residues MTKAKSKLEIVNPNASGIDIGSAVHYVCVPEGRDKQRVQKFGCFTADLHNLARWLKKCKVTTVAMESTGVYWISLFQILE SYEFEVKLVNARHVKNVPGRKSDVQDCQWLQQLHSYGLLRGSFRPDNQMCVLRSYVRQRKKLTESASTHVLRMQKALIQM NIQLHKVISNITGVTGMKIIEAIIEGERNPEKLAEFRSSNIKNDKATIAKALTGDYREEHLFVLKQELELYNIYQEKIAE CDENIENYYKTFETKFCGNKQCSKIKNRSTKNRPNFSIHEELHRVTGMDFTKVPGLDALSIQTIISETGINHNKWPTEKH FSSWLGLSPANKITGEKVFSTRTCRVINRAANAFRMAAHCVSRSNSGIGAYCRRLKKRLGAPKAITATARKLACIFYSML KHGQEYVEKGIDYYEKLYKERVLKNLSKKASELGYVLTKKHELI >Mature_443_residues TKAKSKLEIVNPNASGIDIGSAVHYVCVPEGRDKQRVQKFGCFTADLHNLARWLKKCKVTTVAMESTGVYWISLFQILES YEFEVKLVNARHVKNVPGRKSDVQDCQWLQQLHSYGLLRGSFRPDNQMCVLRSYVRQRKKLTESASTHVLRMQKALIQMN IQLHKVISNITGVTGMKIIEAIIEGERNPEKLAEFRSSNIKNDKATIAKALTGDYREEHLFVLKQELELYNIYQEKIAEC DENIENYYKTFETKFCGNKQCSKIKNRSTKNRPNFSIHEELHRVTGMDFTKVPGLDALSIQTIISETGINHNKWPTEKHF SSWLGLSPANKITGEKVFSTRTCRVINRAANAFRMAAHCVSRSNSGIGAYCRRLKKRLGAPKAITATARKLACIFYSMLK HGQEYVEKGIDYYEKLYKERVLKNLSKKASELGYVLTKKHELI
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50839; Mature: 50708
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAKSKLEIVNPNASGIDIGSAVHYVCVPEGRDKQRVQKFGCFTADLHNLARWLKKCKV CCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH TTVAMESTGVYWISLFQILESYEFEVKLVNARHVKNVPGRKSDVQDCQWLQQLHSYGLLR HEEEECCCCHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC GSFRPDNQMCVLRSYVRQRKKLTESASTHVLRMQKALIQMNIQLHKVISNITGVTGMKII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EAIIEGERNPEKLAEFRSSNIKNDKATIAKALTGDYREEHLFVLKQELELYNIYQEKIAE HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CDENIENYYKTFETKFCGNKQCSKIKNRSTKNRPNFSIHEELHRVTGMDFTKVPGLDALS HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH IQTIISETGINHNKWPTEKHFSSWLGLSPANKITGEKVFSTRTCRVINRAANAFRMAAHC HHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSRSNSGIGAYCRRLKKRLGAPKAITATARKLACIFYSMLKHGQEYVEKGIDYYEKLYKE HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLKNLSKKASELGYVLTKKHELI HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKAKSKLEIVNPNASGIDIGSAVHYVCVPEGRDKQRVQKFGCFTADLHNLARWLKKCKV CCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH TTVAMESTGVYWISLFQILESYEFEVKLVNARHVKNVPGRKSDVQDCQWLQQLHSYGLLR HEEEECCCCHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC GSFRPDNQMCVLRSYVRQRKKLTESASTHVLRMQKALIQMNIQLHKVISNITGVTGMKII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EAIIEGERNPEKLAEFRSSNIKNDKATIAKALTGDYREEHLFVLKQELELYNIYQEKIAE HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CDENIENYYKTFETKFCGNKQCSKIKNRSTKNRPNFSIHEELHRVTGMDFTKVPGLDALS HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH IQTIISETGINHNKWPTEKHFSSWLGLSPANKITGEKVFSTRTCRVINRAANAFRMAAHC HHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSRSNSGIGAYCRRLKKRLGAPKAITATARKLACIFYSMLKHGQEYVEKGIDYYEKLYKE HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLKNLSKKASELGYVLTKKHELI HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA