| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is yfgL [C]
Identifier: 225630936
GI number: 225630936
Start: 1348167
End: 1349363
Strand: Reverse
Name: yfgL [C]
Synonym: WRi_012580
Alternate gene names: 225630936
Gene position: 1349363-1348167 (Counterclockwise)
Preceding gene: 225630937
Following gene: 225630935
Centisome position: 93.33
GC content: 33.83
Gene sequence:
>1197_bases ATGAAACTAGCCATTTTTTTTATTGCTTTCTTATTGAGCACAAGTTGTGTTATTGCAAAAGATGGGGTAGAGCCTAGCTT AGAAATAAAAAATAAATATAGGTGTCACCCGTGGAATAATCCAAGTAGAGAGTTTTCTCAAGGTTATATACAACCAATTC CTATACACGAAAGTTATGAGCTAATTATTGGTGGTGATGGGGTATTGTACAACACAGGGTGGTACTGGAAGGATGTAGAT TTATCTGGTAGTCATAAAACAATTGGTAGAATGAGTGCTACTTGCAGTGAATATTGTAGAGAAATTTACTTAGCAATAGA TAATGTGCTATATGCAATAAATAGAGATAATACACAATATGAAATAAATGAAGACGCAGTTATGTGGAAAAAGGAGTTAA AGTCTTTGGTGAAAGGAAACCCTACAATTTTTAATGATAGAATAGCAATTTTGACTGTAGATAACTATTTATACATGCTG AACATAGAGAATGGTAATACAAGCTGGTTCTATCATATGTCTAATGGTAGTAATCAAATAAATTACATATCTCCTGTGGT TATACACGATAAGCTAATAGTTCCATTTTCAAATGGAGAGTTAGTAGCTTTTGACAAAGATGGGAAAAAGTTGTGGTCTT ATAAGTTACCTTCTACAAATATTTTAGACACTCAGCTTGCAGATATCACAACTACTCCAGTAGTAAAGAATAACACATTA ATAGCTACAAACAATTCTACCATTGTTGCGATTGATATAGGATCAGGAGATCTTTTGTGGTTAAAGGCCATGGAAGCAAA AAATATCAGTGGTGGTGGGATTATGCCATGGCTGTACCCCGATGATATAAATGGTAACGAATTTTTTGTAGTAAACACAA AGAATGAAGTTATGAAAGTTGCAATACCTGATGGTCAGATAATTTGGAGTACTAACTTAGTGGTAAATGATGAGCTAAAT GATAAACTAAAAGACACATATTATGCTAGACCGGTGATAGATGGAAAATTATTTATTGTGAGCAATAAGGGAATCATGTT TCTATTAGATGAGAATTCAGGCATGATAGAAGAGATAGTCAGCATTCCAGAAGATGTGTATCATACGCCTGTAACTGATC TTGGAGTTGGGGATTACTACTTTACAACTGAGAAAAAAGGTGTGTATAGCTGCATTGATCCAAATATCAGCAGATGA
Upstream 100 bases:
>100_bases AAATGGTTTTTAGTGTTAAAATCAAAACTAACGATAGTGAAATTGTTCAATATATCGTATCTTTAATGTGTATATAAAGT GATCTTTCTAGAAAAGTTTT
Downstream 100 bases:
>100_bases AATATTGCAGGTAATAAGGAAGAGATGTGCCATAGGTAGCACCACTTAGGAGGAGTATTGTGGAAAATTCAAGCGTCAGG GGTGTAGATGCGTATTAACA
Product: PQQ enzyme repeat family protein
Products: NA
Alternate protein names: PQQ Repeat Family Protein; PQQ Repeat-Containing Protein; PQQ Repeat Domain Protein; Quino Protein; Pyrrolo-Quinoline Quinone Repeat-Containing Protein; WD-40 Repeat-Containing Protein; PQQ-Like Beta-Propeller Repeat-Containing Protein; Pyrrolo-Quinoline Quinone Beta-Propeller Repeat
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKLAIFFIAFLLSTSCVIAKDGVEPSLEIKNKYRCHPWNNPSREFSQGYIQPIPIHESYELIIGGDGVLYNTGWYWKDVD LSGSHKTIGRMSATCSEYCREIYLAIDNVLYAINRDNTQYEINEDAVMWKKELKSLVKGNPTIFNDRIAILTVDNYLYML NIENGNTSWFYHMSNGSNQINYISPVVIHDKLIVPFSNGELVAFDKDGKKLWSYKLPSTNILDTQLADITTTPVVKNNTL IATNNSTIVAIDIGSGDLLWLKAMEAKNISGGGIMPWLYPDDINGNEFFVVNTKNEVMKVAIPDGQIIWSTNLVVNDELN DKLKDTYYARPVIDGKLFIVSNKGIMFLLDENSGMIEEIVSIPEDVYHTPVTDLGVGDYYFTTEKKGVYSCIDPNISR
Sequences:
>Translated_398_residues MKLAIFFIAFLLSTSCVIAKDGVEPSLEIKNKYRCHPWNNPSREFSQGYIQPIPIHESYELIIGGDGVLYNTGWYWKDVD LSGSHKTIGRMSATCSEYCREIYLAIDNVLYAINRDNTQYEINEDAVMWKKELKSLVKGNPTIFNDRIAILTVDNYLYML NIENGNTSWFYHMSNGSNQINYISPVVIHDKLIVPFSNGELVAFDKDGKKLWSYKLPSTNILDTQLADITTTPVVKNNTL IATNNSTIVAIDIGSGDLLWLKAMEAKNISGGGIMPWLYPDDINGNEFFVVNTKNEVMKVAIPDGQIIWSTNLVVNDELN DKLKDTYYARPVIDGKLFIVSNKGIMFLLDENSGMIEEIVSIPEDVYHTPVTDLGVGDYYFTTEKKGVYSCIDPNISR >Mature_398_residues MKLAIFFIAFLLSTSCVIAKDGVEPSLEIKNKYRCHPWNNPSREFSQGYIQPIPIHESYELIIGGDGVLYNTGWYWKDVD LSGSHKTIGRMSATCSEYCREIYLAIDNVLYAINRDNTQYEINEDAVMWKKELKSLVKGNPTIFNDRIAILTVDNYLYML NIENGNTSWFYHMSNGSNQINYISPVVIHDKLIVPFSNGELVAFDKDGKKLWSYKLPSTNILDTQLADITTTPVVKNNTL IATNNSTIVAIDIGSGDLLWLKAMEAKNISGGGIMPWLYPDDINGNEFFVVNTKNEVMKVAIPDGQIIWSTNLVVNDELN DKLKDTYYARPVIDGKLFIVSNKGIMFLLDENSGMIEEIVSIPEDVYHTPVTDLGVGDYYFTTEKKGVYSCIDPNISR
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44947; Mature: 44947
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAIFFIAFLLSTSCVIAKDGVEPSLEIKNKYRCHPWNNPSREFSQGYIQPIPIHESYE CEEHHHHHHHHHCCCEEEEECCCCCCEEECCCEEECCCCCCCHHHHCCCCEEECCCCCEE LIIGGDGVLYNTGWYWKDVDLSGSHKTIGRMSATCSEYCREIYLAIDNVLYAINRDNTQY EEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE EINEDAVMWKKELKSLVKGNPTIFNDRIAILTVDNYLYMLNIENGNTSWFYHMSNGSNQI EECCCHHHHHHHHHHHHCCCCEEEECEEEEEEECCEEEEEEEECCCEEEEEEECCCCCEE NYISPVVIHDKLIVPFSNGELVAFDKDGKKLWSYKLPSTNILDTQLADITTTPVVKNNTL EEECEEEEECEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCEEECCEE IATNNSTIVAIDIGSGDLLWLKAMEAKNISGGGIMPWLYPDDINGNEFFVVNTKNEVMKV EEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEECEECCCCCCCCEEEEEECCCCEEEE AIPDGQIIWSTNLVVNDELNDKLKDTYYARPVIDGKLFIVSNKGIMFLLDENSGMIEEIV EECCCCEEEEEEEEEECCCCCCHHHCEEECEEECCEEEEEECCCEEEEEECCCCHHHHHH SIPEDVYHTPVTDLGVGDYYFTTEKKGVYSCIDPNISR CCCHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCC >Mature Secondary Structure MKLAIFFIAFLLSTSCVIAKDGVEPSLEIKNKYRCHPWNNPSREFSQGYIQPIPIHESYE CEEHHHHHHHHHCCCEEEEECCCCCCEEECCCEEECCCCCCCHHHHCCCCEEECCCCCEE LIIGGDGVLYNTGWYWKDVDLSGSHKTIGRMSATCSEYCREIYLAIDNVLYAINRDNTQY EEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE EINEDAVMWKKELKSLVKGNPTIFNDRIAILTVDNYLYMLNIENGNTSWFYHMSNGSNQI EECCCHHHHHHHHHHHHCCCCEEEECEEEEEEECCEEEEEEEECCCEEEEEEECCCCCEE NYISPVVIHDKLIVPFSNGELVAFDKDGKKLWSYKLPSTNILDTQLADITTTPVVKNNTL EEECEEEEECEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCEEECCEE IATNNSTIVAIDIGSGDLLWLKAMEAKNISGGGIMPWLYPDDINGNEFFVVNTKNEVMKV EEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEECEECCCCCCCCEEEEEECCCCEEEE AIPDGQIIWSTNLVVNDELNDKLKDTYYARPVIDGKLFIVSNKGIMFLLDENSGMIEEIV EECCCCEEEEEEEEEECCCCCCHHHCEEECEEECCEEEEEECCCEEEEEECCCCHHHHHH SIPEDVYHTPVTDLGVGDYYFTTEKKGVYSCIDPNISR CCCHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA