| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is cshA [H]
Identifier: 225630895
GI number: 225630895
Start: 1301228
End: 1302436
Strand: Direct
Name: cshA [H]
Synonym: WRi_012100
Alternate gene names: 225630895
Gene position: 1301228-1302436 (Clockwise)
Preceding gene: 225630894
Following gene: 225630896
Centisome position: 90.0
GC content: 39.29
Gene sequence:
>1209_bases ATGGGTCTCCCAGCTTCGCTTAGACAAGCTCTAGATAAAAATAATCTTTTCGTCCCAACTCCGATTCAAATACAAGCGAT TCCCTTAGCGCTACAAGGTAAAGATATTCTCGGATCTGCTCAAACGGGGACTGGAAAAACTTTAGCATTTGCTATTCCGT TGGTTGCTAAGTTGCTGAATGAGCCTAACACTGGTTCAGCTTTAGTCATCGTGCCAACCAGAGAGCTTGCGCATCAGGTA ACAAATGAGATAAGAAAACTCTTATCTCAAAATTCTGCACTAAGGGTCGCTTTGTTGATTGGTGGTGAGCCTATTTTTAG GCAGCTAAATCAGCTTCAGAAAAAACCACAAATTGTAATAGGTACTCCTGGTCGTATTATAGACCATATTGAGCGTAAAA CTTTGATTACTCGCAATGTTAGCGTTCTTGTGCTTGATGAAACGGATCGTATGTTTGATATGGGCTTTGGAGTTCAGATT GAAGAAATTATGAAGCATTTGCCTAAAATAAGGCAAACTCTTATGTTTTCTGCAACTCTTCCTGGAGATATAGTAAAACT TGCTGAGAAGTACCTTAATCGACCAGAACGTATTTCTGTTGATTGTGAGGTTACAACTTCTGTAAAAATTAAGCAAGAAA TTGTTTATGCATCAGAATCAGAAAAATATGAAAAGCTTGTTACACAACTATGTCAGCGCGAAGGATCAATCATTATCTTT GTCAAAACAAAGCGAGGAGCGGATCAGCTAGCTCACAGATTGCACAAAGATGACTATAGCGCTTTAGCAATTCATGGTGA TTTAAGGCAGCACAAGCGCGAAAGGGTCATTAATTCTTTTCGTCGTGGCCGTAATCAAATCATGGTTGCAACAGATGTTG CTTCTCGCGGCCTTGATATTCCCCACATTCAACATGTTATCAATTATGATGCACCACAATCGCAAGCTGACTATATTCAT CGTATAGGTAGAACTGCACGCGCTGGAGCTGAAGGGTATGCGCTATCTTTTGTTACACCTCAAGATAAGAGAAGACTGCC TGTACTGGCAGACAAAGAAGGAGAGCTAAATTTTGATTGTAGTGTGCAATTTAAAAAACGTAACAGCAAAAAGGTCTTTA AAAGGCCAAGTACGTTAAAGACTAAATACGGTAGAAAAAAGATCAATGCATTTAAGAAGAAAAGCAGAGTACTAGAAAAA GCGTATTAA
Upstream 100 bases:
>100_bases ACGGAGAAGATAAAAAATCTGCAATAAATTTAAGATTGGAAGATTAATCTATTATGAAGTCTTTTAACAGGATTAACGTA TTGTGAATAATTTTCATGAG
Downstream 100 bases:
>100_bases ATAGGATTTACCTACAATTTGATAAGCGTAAAACTCGTCATTCCGCTACTCATTAGCGGAATCTATGCTGAGATATTGCG GTGCTATGACGTAGATCCAG
Product: ATP-dependent RNA helicase, DeaD/DeaH box family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGLPASLRQALDKNNLFVPTPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLLNEPNTGSALVIVPTRELAHQV TNEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVIGTPGRIIDHIERKTLITRNVSVLVLDETDRMFDMGFGVQI EEIMKHLPKIRQTLMFSATLPGDIVKLAEKYLNRPERISVDCEVTTSVKIKQEIVYASESEKYEKLVTQLCQREGSIIIF VKTKRGADQLAHRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDIPHIQHVINYDAPQSQADYIH RIGRTARAGAEGYALSFVTPQDKRRLPVLADKEGELNFDCSVQFKKRNSKKVFKRPSTLKTKYGRKKINAFKKKSRVLEK AY
Sequences:
>Translated_402_residues MGLPASLRQALDKNNLFVPTPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLLNEPNTGSALVIVPTRELAHQV TNEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVIGTPGRIIDHIERKTLITRNVSVLVLDETDRMFDMGFGVQI EEIMKHLPKIRQTLMFSATLPGDIVKLAEKYLNRPERISVDCEVTTSVKIKQEIVYASESEKYEKLVTQLCQREGSIIIF VKTKRGADQLAHRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDIPHIQHVINYDAPQSQADYIH RIGRTARAGAEGYALSFVTPQDKRRLPVLADKEGELNFDCSVQFKKRNSKKVFKRPSTLKTKYGRKKINAFKKKSRVLEK AY >Mature_401_residues GLPASLRQALDKNNLFVPTPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLLNEPNTGSALVIVPTRELAHQVT NEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVIGTPGRIIDHIERKTLITRNVSVLVLDETDRMFDMGFGVQIE EIMKHLPKIRQTLMFSATLPGDIVKLAEKYLNRPERISVDCEVTTSVKIKQEIVYASESEKYEKLVTQLCQREGSIIIFV KTKRGADQLAHRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDIPHIQHVINYDAPQSQADYIHR IGRTARAGAEGYALSFVTPQDKRRLPVLADKEGELNFDCSVQFKKRNSKKVFKRPSTLKTKYGRKKINAFKKKSRVLEKA Y
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=348, Percent_Identity=42.816091954023, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI38201710, Length=348, Percent_Identity=42.816091954023, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=40.0560224089636, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI20149629, Length=344, Percent_Identity=42.1511627906977, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI41327771, Length=376, Percent_Identity=39.6276595744681, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=39.3767705382436, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=40.1709401709402, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=40.1709401709402, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI21071032, Length=352, Percent_Identity=38.9204545454545, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI301171475, Length=349, Percent_Identity=38.9684813753582, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI87196351, Length=349, Percent_Identity=38.9684813753582, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI301171467, Length=349, Percent_Identity=38.9684813753582, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=36.8876080691643, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI222352149, Length=335, Percent_Identity=40.2985074626866, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI169881239, Length=349, Percent_Identity=38.6819484240688, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI13514809, Length=349, Percent_Identity=38.6819484240688, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI31542656, Length=352, Percent_Identity=38.6363636363636, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI262118318, Length=334, Percent_Identity=38.0239520958084, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI216548263, Length=343, Percent_Identity=37.3177842565598, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI262231852, Length=343, Percent_Identity=37.3177842565598, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13518015, Length=343, Percent_Identity=37.3177842565598, Blast_Score=230, Evalue=1e-60, Organism=Homo sapiens, GI7661920, Length=353, Percent_Identity=36.2606232294618, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI41327776, Length=343, Percent_Identity=38.4839650145773, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=36.5168539325843, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=36.5168539325843, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI83700235, Length=352, Percent_Identity=37.5, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=37.2881355932203, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI13129006, Length=351, Percent_Identity=35.8974358974359, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI164664518, Length=337, Percent_Identity=35.9050445103858, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=35.2272727272727, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI13514831, Length=336, Percent_Identity=37.5, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI55749865, Length=336, Percent_Identity=36.0119047619048, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI50659095, Length=352, Percent_Identity=36.9318181818182, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI21040371, Length=334, Percent_Identity=33.5329341317365, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=33.160621761658, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI38569503, Length=346, Percent_Identity=34.393063583815, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38569505, Length=346, Percent_Identity=34.393063583815, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38327634, Length=333, Percent_Identity=34.5345345345345, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI4758112, Length=334, Percent_Identity=33.8323353293413, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI18375623, Length=334, Percent_Identity=33.8323353293413, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI41327779, Length=366, Percent_Identity=33.0601092896175, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI62241022, Length=337, Percent_Identity=33.2344213649852, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI8922886, Length=337, Percent_Identity=32.9376854599407, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI6005743, Length=337, Percent_Identity=33.2344213649852, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI256223453, Length=333, Percent_Identity=28.8288288288288, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI164419732, Length=336, Percent_Identity=31.8452380952381, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=32.8125, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=33.7662337662338, Blast_Score=151, Evalue=8e-37, Organism=Homo sapiens, GI256773275, Length=364, Percent_Identity=30.7692307692308, Blast_Score=141, Evalue=9e-34, Organism=Homo sapiens, GI4826686, Length=342, Percent_Identity=28.3625730994152, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=27.2058823529412, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI17505907, Length=191, Percent_Identity=39.2670157068063, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI20336298, Length=191, Percent_Identity=39.2670157068063, Blast_Score=118, Evalue=9e-27, Organism=Homo sapiens, GI4557365, Length=364, Percent_Identity=25, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=41.4985590778098, Blast_Score=265, Evalue=3e-72, Organism=Escherichia coli, GI1787016, Length=345, Percent_Identity=40.5797101449275, Blast_Score=251, Evalue=4e-68, Organism=Escherichia coli, GI1790214, Length=352, Percent_Identity=40.0568181818182, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=36.4672364672365, Blast_Score=242, Evalue=4e-65, Organism=Escherichia coli, GI1788930, Length=340, Percent_Identity=39.4117647058824, Blast_Score=221, Evalue=7e-59, Organism=Escherichia coli, GI48994977, Length=382, Percent_Identity=25.3926701570681, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17555296, Length=344, Percent_Identity=40.1162790697674, Blast_Score=257, Evalue=9e-69, Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=39.3258426966292, Blast_Score=249, Evalue=1e-66, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=36.6754617414248, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=40.9836065573771, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=40.9836065573771, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=40.9836065573771, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71995718, Length=351, Percent_Identity=42.4501424501425, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI115533224, Length=331, Percent_Identity=41.3897280966767, Blast_Score=241, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17507945, Length=365, Percent_Identity=37.2602739726027, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71995724, Length=348, Percent_Identity=35.9195402298851, Blast_Score=227, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17507121, Length=348, Percent_Identity=35.632183908046, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17552642, Length=346, Percent_Identity=39.5953757225434, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=37.0786516853933, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=37.0786516853933, Blast_Score=225, Evalue=3e-59, Organism=Caenorhabditis elegans, GI115532546, Length=354, Percent_Identity=36.4406779661017, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115532548, Length=354, Percent_Identity=36.4406779661017, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17510559, Length=378, Percent_Identity=37.037037037037, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71987143, Length=333, Percent_Identity=33.9339339339339, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507881, Length=384, Percent_Identity=37.2395833333333, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17507877, Length=367, Percent_Identity=37.3297002724796, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17537549, Length=362, Percent_Identity=37.5690607734807, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507879, Length=348, Percent_Identity=37.6436781609195, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17552114, Length=329, Percent_Identity=35.258358662614, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17509811, Length=350, Percent_Identity=36, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=34.5714285714286, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71982858, Length=351, Percent_Identity=32.7635327635328, Blast_Score=187, Evalue=6e-48, Organism=Caenorhabditis elegans, GI193206561, Length=339, Percent_Identity=33.0383480825959, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=30.7894736842105, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71990816, Length=383, Percent_Identity=31.5926892950392, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=30.9090909090909, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=31.4363143631436, Blast_Score=164, Evalue=9e-41, Organism=Caenorhabditis elegans, GI193208216, Length=363, Percent_Identity=33.8842975206612, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI25148203, Length=377, Percent_Identity=30.5039787798408, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17556951, Length=335, Percent_Identity=30.1492537313433, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17536099, Length=365, Percent_Identity=29.3150684931507, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17536101, Length=365, Percent_Identity=29.3150684931507, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=28.5276073619632, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17536103, Length=365, Percent_Identity=29.3150684931507, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25148291, Length=339, Percent_Identity=25.9587020648968, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71997889, Length=362, Percent_Identity=26.2430939226519, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148205, Length=334, Percent_Identity=27.8443113772455, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71982862, Length=185, Percent_Identity=34.0540540540541, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71987152, Length=93, Percent_Identity=38.7096774193548, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32564293, Length=373, Percent_Identity=20.911528150134, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=43.75, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6325138, Length=345, Percent_Identity=42.6086956521739, Blast_Score=261, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6324778, Length=395, Percent_Identity=37.9746835443038, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=41.1594202898551, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=336, Percent_Identity=38.9880952380952, Blast_Score=235, Evalue=9e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=9e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=342, Percent_Identity=39.766081871345, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6320449, Length=353, Percent_Identity=37.9603399433428, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6320173, Length=393, Percent_Identity=35.1145038167939, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=34.9544072948328, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321963, Length=410, Percent_Identity=34.6341463414634, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=350, Percent_Identity=32.5714285714286, Blast_Score=203, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6322912, Length=333, Percent_Identity=37.2372372372372, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=333, Percent_Identity=37.2372372372372, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=34.9162011173184, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=346, Percent_Identity=34.971098265896, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=33.4146341463415, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=362, Percent_Identity=33.4254143646409, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=334, Percent_Identity=32.6347305389222, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=352, Percent_Identity=36.3636363636364, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=33.9331619537275, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=382, Percent_Identity=30.3664921465969, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322876, Length=410, Percent_Identity=32.1951219512195, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=406, Percent_Identity=29.8029556650246, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=29.9145299145299, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6321374, Length=411, Percent_Identity=23.8442822384428, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323844, Length=358, Percent_Identity=21.7877094972067, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI28574962, Length=348, Percent_Identity=41.0919540229885, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24584399, Length=344, Percent_Identity=39.8255813953488, Blast_Score=261, Evalue=9e-70, Organism=Drosophila melanogaster, GI24585582, Length=344, Percent_Identity=40.6976744186046, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=41.0112359550562, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24642151, Length=336, Percent_Identity=40.1785714285714, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=38.8297872340425, Blast_Score=254, Evalue=9e-68, Organism=Drosophila melanogaster, GI24644483, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI281361218, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644481, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644479, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644487, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI45551833, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644485, Length=382, Percent_Identity=37.9581151832461, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17985987, Length=352, Percent_Identity=40.3409090909091, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=37.883008356546, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI17977678, Length=353, Percent_Identity=36.8271954674221, Blast_Score=234, Evalue=5e-62, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=39.2045454545455, Blast_Score=231, Evalue=5e-61, Organism=Drosophila melanogaster, GI21356161, Length=353, Percent_Identity=38.2436260623229, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI281365720, Length=307, Percent_Identity=40.3908794788274, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24645031, Length=351, Percent_Identity=35.3276353276353, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI17136814, Length=366, Percent_Identity=36.0655737704918, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI28575014, Length=351, Percent_Identity=35.3276353276353, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583281, Length=329, Percent_Identity=35.5623100303951, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24583279, Length=329, Percent_Identity=35.5623100303951, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24582080, Length=333, Percent_Identity=35.7357357357357, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI24582078, Length=333, Percent_Identity=35.7357357357357, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI17136248, Length=333, Percent_Identity=35.7357357357357, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI24582075, Length=333, Percent_Identity=35.7357357357357, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI21355559, Length=346, Percent_Identity=34.1040462427746, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=33.8028169014084, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=33.8028169014084, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581954, Length=335, Percent_Identity=34.0298507462687, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24581952, Length=335, Percent_Identity=34.0298507462687, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24581956, Length=335, Percent_Identity=34.0298507462687, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=33.8624338624339, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24666101, Length=355, Percent_Identity=33.2394366197183, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI17647335, Length=345, Percent_Identity=31.8840579710145, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643725, Length=381, Percent_Identity=31.496062992126, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=29.7872340425532, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI20130173, Length=312, Percent_Identity=32.3717948717949, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI17136666, Length=399, Percent_Identity=30.0751879699248, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24640164, Length=343, Percent_Identity=28.2798833819242, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI19920478, Length=338, Percent_Identity=28.4023668639053, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859659, Length=220, Percent_Identity=34.5454545454545, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI28571338, Length=220, Percent_Identity=34.5454545454545, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24646066, Length=364, Percent_Identity=23.0769230769231, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 45290; Mature: 45159
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPASLRQALDKNNLFVPTPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLLN CCCCHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC EPNTGSALVIVPTRELAHQVTNEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVI CCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCEEEE GTPGRIIDHIERKTLITRNVSVLVLDETDRMFDMGFGVQIEEIMKHLPKIRQTLMFSATL ECCHHHHHHHHHHHEEECCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCC PGDIVKLAEKYLNRPERISVDCEVTTSVKIKQEIVYASESEKYEKLVTQLCQREGSIIIF CHHHHHHHHHHCCCCCEEEEEEEEECCEEEEHHEEECCCHHHHHHHHHHHHHCCCCEEEE VKTKRGADQLAHRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDI EECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCC PHIQHVINYDAPQSQADYIHRIGRTARAGAEGYALSFVTPQDKRRLPVLADKEGELNFDC HHHHHHHCCCCCCHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEE SVQFKKRNSKKVFKRPSTLKTKYGRKKINAFKKKSRVLEKAY EEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLPASLRQALDKNNLFVPTPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLLN CCCHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC EPNTGSALVIVPTRELAHQVTNEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVI CCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCEEEE GTPGRIIDHIERKTLITRNVSVLVLDETDRMFDMGFGVQIEEIMKHLPKIRQTLMFSATL ECCHHHHHHHHHHHEEECCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCC PGDIVKLAEKYLNRPERISVDCEVTTSVKIKQEIVYASESEKYEKLVTQLCQREGSIIIF CHHHHHHHHHHCCCCCEEEEEEEEECCEEEEHHEEECCCHHHHHHHHHHHHHCCCCEEEE VKTKRGADQLAHRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDI EECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCC PHIQHVINYDAPQSQADYIHRIGRTARAGAEGYALSFVTPQDKRRLPVLADKEGELNFDC HHHHHHHCCCCCCHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEE SVQFKKRNSKKVFKRPSTLKTKYGRKKINAFKKKSRVLEKAY EEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA