| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630879
Identifier: 225630879
GI number: 225630879
Start: 1281932
End: 1283101
Strand: Reverse
Name: 225630879
Synonym: WRi_011930
Alternate gene names: NA
Gene position: 1283101-1281932 (Counterclockwise)
Preceding gene: 225630880
Following gene: 225630878
Centisome position: 88.74
GC content: 33.59
Gene sequence:
>1170_bases ATGGTAGTGAGCTTTTATATAGGGGGTATAATCATGGGCATAATAGATAATTTTTTAATTAAATCTGTCAAAAACAATGA CATAAAAGGTGTTAAACTGACTCTAATTCTCTATGATGCATTAAATAGTTTTAGAAAATTCTTTTCAAAGACTATGTCTC TCAAGAATACAGGATCATTTGATATAAATAATAATCAAGCTTTAAATCAGGCTTTAGGACATGCTACAGATCACAAAATA ATGGAATTGCTGATTAATCGTGGAGCTGATATCCACTCAATAGATGAGAATGGAAAGAATGTTATAATTCGTGTTATTGA GAGTTTAGCAGAATCAAAAAATCTAAAATTGGATAGTGAGAAAAACTTACCAGCAGAGATAATTCTTCACCCCACAGTTT CCTTTTTACTAGGAAAAGGCGCAGAGTATTATTCTACAGATGATTTGAATATTGAAGCTATACAACAAAAACCTCCTAGA ACTTTTGAGTATAAGTCAAAGAATACTAGCTATGATGCTTTGCCTTCAAAAGAGCCCATTTACGCTGAGGTGTATGATGC TAAGGTTAGTAACTCATTAGGGGAGAATGGTTATTTGAGTGTATCAGAAGAATCTATTTATGCTGAAATATATGATTCAC ATAAAAAATCCACTGAAAATTTATCATTGGAAGATAGTGGTTATTTGAGTATATCAGAAGAACCTATTTATTGCACTATA GATGATCTTTCAGAACAAAAAAAGCCTACTAGCCTAAAACAGAAAGAGCCAGAACAGTCGTCAGAACCTATTTATGCTAG GGTAGATTTGTCCAAGAAAAGAGCAGAAAGAAAAGCAAAAGACATAAAAGCTAATTCTGGAACTTGCCATGGGTTAGTGC AAGATAAAGTGAATGATTGGCAAGTGAAGCTAAATGAGCTAAGTGCTAATAAGTCGATAAGTCAGCAACAGACTAATGAT CAAAAAATTAAGACCAAGGCTGGCTTTAGTGTAGAAGAAATAAGGCAGAAATATGAGCGTAGAGATTCTGGCTACGATTC TGGCTATGATTCCGATACAAAAGTTGAACAACAATTAGAATTAGCTCCTAAATCTGAGATAGGTTCAGTGAGTATTGAGC ATGGAGTAATAGGAGGCTGTCGATATAAGATTACTGATATATCCCTCTAA
Upstream 100 bases:
>100_bases CAATCCAGATGCAATTATGATGTCAATGCCACCACTTGTTAAGTGGTTATAGAGAGCTGCTATTAGTAGAAAATAAATCA TCATAGTTTAAAATTGTACC
Downstream 100 bases:
>100_bases CTATGTGATTCAAAATAATTGAATTGACTTTATATATGTAATCGATATAACCTAGTTAGATTCAAGTTGACTCTTTCGTC TAGTGGTTAGGACACCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MVVSFYIGGIIMGIIDNFLIKSVKNNDIKGVKLTLILYDALNSFRKFFSKTMSLKNTGSFDINNNQALNQALGHATDHKI MELLINRGADIHSIDENGKNVIIRVIESLAESKNLKLDSEKNLPAEIILHPTVSFLLGKGAEYYSTDDLNIEAIQQKPPR TFEYKSKNTSYDALPSKEPIYAEVYDAKVSNSLGENGYLSVSEESIYAEIYDSHKKSTENLSLEDSGYLSISEEPIYCTI DDLSEQKKPTSLKQKEPEQSSEPIYARVDLSKKRAERKAKDIKANSGTCHGLVQDKVNDWQVKLNELSANKSISQQQTND QKIKTKAGFSVEEIRQKYERRDSGYDSGYDSDTKVEQQLELAPKSEIGSVSIEHGVIGGCRYKITDISL
Sequences:
>Translated_389_residues MVVSFYIGGIIMGIIDNFLIKSVKNNDIKGVKLTLILYDALNSFRKFFSKTMSLKNTGSFDINNNQALNQALGHATDHKI MELLINRGADIHSIDENGKNVIIRVIESLAESKNLKLDSEKNLPAEIILHPTVSFLLGKGAEYYSTDDLNIEAIQQKPPR TFEYKSKNTSYDALPSKEPIYAEVYDAKVSNSLGENGYLSVSEESIYAEIYDSHKKSTENLSLEDSGYLSISEEPIYCTI DDLSEQKKPTSLKQKEPEQSSEPIYARVDLSKKRAERKAKDIKANSGTCHGLVQDKVNDWQVKLNELSANKSISQQQTND QKIKTKAGFSVEEIRQKYERRDSGYDSGYDSDTKVEQQLELAPKSEIGSVSIEHGVIGGCRYKITDISL >Mature_389_residues MVVSFYIGGIIMGIIDNFLIKSVKNNDIKGVKLTLILYDALNSFRKFFSKTMSLKNTGSFDINNNQALNQALGHATDHKI MELLINRGADIHSIDENGKNVIIRVIESLAESKNLKLDSEKNLPAEIILHPTVSFLLGKGAEYYSTDDLNIEAIQQKPPR TFEYKSKNTSYDALPSKEPIYAEVYDAKVSNSLGENGYLSVSEESIYAEIYDSHKKSTENLSLEDSGYLSISEEPIYCTI DDLSEQKKPTSLKQKEPEQSSEPIYARVDLSKKRAERKAKDIKANSGTCHGLVQDKVNDWQVKLNELSANKSISQQQTND QKIKTKAGFSVEEIRQKYERRDSGYDSGYDSDTKVEQQLELAPKSEIGSVSIEHGVIGGCRYKITDISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43589; Mature: 43589
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSFYIGGIIMGIIDNFLIKSVKNNDIKGVKLTLILYDALNSFRKFFSKTMSLKNTGSF CEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCC DINNNQALNQALGHATDHKIMELLINRGADIHSIDENGKNVIIRVIESLAESKNLKLDSE CCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCC KNLPAEIILHPTVSFLLGKGAEYYSTDDLNIEAIQQKPPRTFEYKSKNTSYDALPSKEPI CCCCEEEEECCHHHHHHCCCCCEECCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCC YAEVYDAKVSNSLGENGYLSVSEESIYAEIYDSHKKSTENLSLEDSGYLSISEEPIYCTI EEEEEHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEE DDLSEQKKPTSLKQKEPEQSSEPIYARVDLSKKRAERKAKDIKANSGTCHGLVQDKVNDW CCHHCCCCCCCHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEHHCCCCCE QVKLNELSANKSISQQQTNDQKIKTKAGFSVEEIRQKYERRDSGYDSGYDSDTKVEQQLE EEEEEHHCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LAPKSEIGSVSIEHGVIGGCRYKITDISL CCCCCCCCCEEECCCCCCCCEEEEEECCC >Mature Secondary Structure MVVSFYIGGIIMGIIDNFLIKSVKNNDIKGVKLTLILYDALNSFRKFFSKTMSLKNTGSF CEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCC DINNNQALNQALGHATDHKIMELLINRGADIHSIDENGKNVIIRVIESLAESKNLKLDSE CCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCC KNLPAEIILHPTVSFLLGKGAEYYSTDDLNIEAIQQKPPRTFEYKSKNTSYDALPSKEPI CCCCEEEEECCHHHHHHCCCCCEECCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCC YAEVYDAKVSNSLGENGYLSVSEESIYAEIYDSHKKSTENLSLEDSGYLSISEEPIYCTI EEEEEHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEE DDLSEQKKPTSLKQKEPEQSSEPIYARVDLSKKRAERKAKDIKANSGTCHGLVQDKVNDW CCHHCCCCCCCHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEHHCCCCCE QVKLNELSANKSISQQQTNDQKIKTKAGFSVEEIRQKYERRDSGYDSGYDSDTKVEQQLE EEEEEHHCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LAPKSEIGSVSIEHGVIGGCRYKITDISL CCCCCCCCCEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA