| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630873
Identifier: 225630873
GI number: 225630873
Start: 1276952
End: 1277539
Strand: Direct
Name: 225630873
Synonym: WRi_011850
Alternate gene names: NA
Gene position: 1276952-1277539 (Clockwise)
Preceding gene: 225630867
Following gene: 225630874
Centisome position: 88.32
GC content: 35.88
Gene sequence:
>588_bases ATGAATTATTTATGCACTATTAAATTAAAAATGATGAGTAAACAAGATCTATTATCGTTGATGAAAGCAAGACACAGCGG ACGTTCATACGATCCTACAAGAGCAATATCTCAGGAAGACATGGATATTTTAATGGAAGCTGTAAGGCTGACTCCCTCAT GTTTTGGTGATGAACCCTGGAGATACGTAATATGCAACAAACAGAACAATCAAAGCGCATGGGAAAAGCTGCTAAATTGC CTTGATGAATCTAATCAAAAATGGGCAAAAGATGCACAAGTGTTAATCATATCTTTAAGTGCTAAAAACTTCCGTAAACA AGGTAAAGGAGAAAATCTTTGGGCTAGTCATGATACTGGTGCAGCAAATTATGGACTTATGTTACAAGCTGCAGTTATGA ACTTAATGGCCCATCAAATGGGTGGATTTGATAGAGATAAAATAGTGAAAGAGTTCAATATACCCAATGACTTTAACGTA ATGTCAGTGATAGCGGTTGGTTACGAAGAAGAGGGTGCTGAAACAAGTAAGAAGAAAAGAAGACCAATAGAAGAAATATT TTTTTATGATGAGTGGCCAAAATTCTGA
Upstream 100 bases:
>100_bases TTGTGTTATAAACATACCTTCCCAATAAAAATAACTTATTAAATGTAATATATGTGTATGAGAGGTTTTGCAATTTAAAT TTTGCTTATATTGTGCTACA
Downstream 100 bases:
>100_bases AAATTTTATCAAAATGCACGGAACTGGTAACAACTTCGTTATCATAGACTCATGTTCAGCAAATGATTTAAATTGGAACT ATAAAAAAATTGCTAACCAA
Product: nitroreductase family protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Bacterioferritin Comigratory Protein/NADH Dehydrogenase; NAD(P)H-Flavin Oxidoreductase; Oxidoreductase Protein; Oxygen-Insensitive Nitroreductase; NADH Dehydrogenase/NAD(P)H Nitroreductase
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNYLCTIKLKMMSKQDLLSLMKARHSGRSYDPTRAISQEDMDILMEAVRLTPSCFGDEPWRYVICNKQNNQSAWEKLLNC LDESNQKWAKDAQVLIISLSAKNFRKQGKGENLWASHDTGAANYGLMLQAAVMNLMAHQMGGFDRDKIVKEFNIPNDFNV MSVIAVGYEEEGAETSKKKRRPIEEIFFYDEWPKF
Sequences:
>Translated_195_residues MNYLCTIKLKMMSKQDLLSLMKARHSGRSYDPTRAISQEDMDILMEAVRLTPSCFGDEPWRYVICNKQNNQSAWEKLLNC LDESNQKWAKDAQVLIISLSAKNFRKQGKGENLWASHDTGAANYGLMLQAAVMNLMAHQMGGFDRDKIVKEFNIPNDFNV MSVIAVGYEEEGAETSKKKRRPIEEIFFYDEWPKF >Mature_195_residues MNYLCTIKLKMMSKQDLLSLMKARHSGRSYDPTRAISQEDMDILMEAVRLTPSCFGDEPWRYVICNKQNNQSAWEKLLNC LDESNQKWAKDAQVLIISLSAKNFRKQGKGENLWASHDTGAANYGLMLQAAVMNLMAHQMGGFDRDKIVKEFNIPNDFNV MSVIAVGYEEEGAETSKKKRRPIEEIFFYDEWPKF
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22488; Mature: 22488
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLCTIKLKMMSKQDLLSLMKARHSGRSYDPTRAISQEDMDILMEAVRLTPSCFGDEPW CCEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCHHHCCCCCE RYVICNKQNNQSAWEKLLNCLDESNQKWAKDAQVLIISLSAKNFRKQGKGENLWASHDTG EEEEECCCCCHHHHHHHHHHHCCCCHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCC AANYGLMLQAAVMNLMAHQMGGFDRDKIVKEFNIPNDFNVMSVIAVGYEEEGAETSKKKR CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHEEECCCCCCCHHHHHHC RPIEEIFFYDEWPKF CCHHHHHCCCCCCCC >Mature Secondary Structure MNYLCTIKLKMMSKQDLLSLMKARHSGRSYDPTRAISQEDMDILMEAVRLTPSCFGDEPW CCEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCHHHCCCCCE RYVICNKQNNQSAWEKLLNCLDESNQKWAKDAQVLIISLSAKNFRKQGKGENLWASHDTG EEEEECCCCCHHHHHHHHHHHCCCCHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCC AANYGLMLQAAVMNLMAHQMGGFDRDKIVKEFNIPNDFNVMSVIAVGYEEEGAETSKKKR CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHEEECCCCCCCHHHHHHC RPIEEIFFYDEWPKF CCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA