Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630871

Identifier: 225630871

GI number: 225630871

Start: 1275953

End: 1276342

Strand: Reverse

Name: 225630871

Synonym: WRi_011830

Alternate gene names: NA

Gene position: 1276342-1275953 (Counterclockwise)

Preceding gene: 225630872

Following gene: 225630870

Centisome position: 88.27

GC content: 37.95

Gene sequence:

>390_bases
ATGATAAAGTTTCGCCCTCATCATTTCATGTGCACCCTCGCGTTTCGGGGATATGGGTATTCTCAGGGTTTTGTAGAAAA
TTATAGGAAGATAGCAAGTGAAGTGGTTAGTACTCAAATCGAAGTAGTTGGTAACCTTGATAGTATCTGTAGTGCTTGTC
CAAATCAGACTAAACAAGGTAAATGCACCACACAAGCTAAAGTTTTAGAGCTAGATAGAAGGCATATGGAAATTTTAGGA
GTAAAAATTGGCGAGACTTTAACTTGGAATGAGGCAGTAAAAAAGATTAGAGAGAAAATGTCTTTAGAGAAATTCGAGTA
CGCATGTGAGGGGTGCAATTGGCAGCCATATGGAATATGTAAAAATGCCCTTTTAAATCTACAAAGGTAG

Upstream 100 bases:

>100_bases
TGGGTCTGGAACAAGCAATAATGGTGGGTGTTTTACCATTTATCCTTCCTGGTTTGGTAAAAATTTTTCTACTTGTAGCG
GCTTTGCAATATTTGAAAAA

Downstream 100 bases:

>100_bases
TTGACAAAATGTTAAGATAAATCGAAGCATTTTTGTGGAAATAAAGCGAAATATGGAAGACAAAAGATAAATGCATTCTG
AAAGGCTACACAGCATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQGKCTTQAKVLELDRRHMEILG
VKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGICKNALLNLQR

Sequences:

>Translated_129_residues
MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQGKCTTQAKVLELDRRHMEILG
VKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGICKNALLNLQR
>Mature_129_residues
MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQGKCTTQAKVLELDRRHMEILG
VKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGICKNALLNLQR

Specific function: Unknown

COG id: COG3543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14812; Mature: 14812

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQG
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
KCTTQAKVLELDRRHMEILGVKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGIC
CCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KNALLNLQR
HHHHHCCCC
>Mature Secondary Structure
MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQG
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
KCTTQAKVLELDRRHMEILGVKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGIC
CCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KNALLNLQR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA