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The map label for this gene is yciM [C]

Identifier: 225630870

GI number: 225630870

Start: 1274909

End: 1275784

Strand: Reverse

Name: yciM [C]

Synonym: WRi_011820

Alternate gene names: 225630870

Gene position: 1275784-1274909 (Counterclockwise)

Preceding gene: 225630871

Following gene: 225630869

Centisome position: 88.24

GC content: 30.59

Gene sequence:

>876_bases
GTGTTGCATATAGCTCAAAGAAATAAGGTTTACTGGTTACACGCTGCAGCCAATGCCACAACACTAGGACCTATGTTTAT
CTGCATGTTAATTTGCGTTGTGATTTTATGGAGGTCTTCTGTTACCTATGCTAGTGAAAATTTGGAGATACAGAAGGCCT
TTGATAGTGTTGTCAAGCATATAAAAGCTGATAAAAAATATAAAGATCTTGATGTTATTGAGAGAAAAAGTGATAAATTT
AACATCAAAATTGCACAGAATTCTGGCAAGAGTTTTGACATATACTCTACTTTAAAAAAAGCAAAAGATTCCTTTGAATC
AGGAGATAATGAAACAGCTATTTCTCTCCTTAATCAGATCATTGCAAAGTTTCCTTATCATAAAAATGCTTTAATTGGAT
TGGGAAATATTTATTACGCTAATAAAGAATACAAAAAAGCTGTAGAGATTTACACAAGACTGTTAAAAGAACACCCTAGT
AACCCTTACATATTAAAAAATTTTCTGACGATAATCTCACAATATGATCCTGATCTGGCGTTGAGTGAAATGTTAAAATT
GTATGATATACATAAAAATTATGCTCCTTTATTAGCAAATTTAGGTCTGATCTATATGAAAAAGGAGGATTATGTAAAAG
GTAAAGAGTATATGATAACTGCTATTTCCCTCGATGAAAACAATATTTTTTATACTTATAATTTAGCTGTTATTCTAGAT
AAACTTTCAGATTTTCAAAATGCTACAATATTCTACTTAAAGTTGTTAAACATGGCTACAACTTCGAAAGATGTGAGTGA
AAAAATACCTTTATACAAAGTGACAGCAAGACTAAAATTTATAAAACTCCACAGCACGCACCCAAAGATTTCATAA

Upstream 100 bases:

>100_bases
AAATGCATTCTGAAAGGCTACACAGCATGTTCGTCCCGCTAATTAATAATATCTTTATTATTGTATGAGATAGGTAATTT
AGCATTTATGAATTTGTAAT

Downstream 100 bases:

>100_bases
AAGCTTATAGCTTACCTAAATCTAATTTATCGTATCTGTTCAAGGGAGTGGCTAATGTGCAAATATTGAAGCAAAGTGTG
TGACACACAGCTGTACGAAC

Product: TPR domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MLHIAQRNKVYWLHAAANATTLGPMFICMLICVVILWRSSVTYASENLEIQKAFDSVVKHIKADKKYKDLDVIERKSDKF
NIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYHKNALIGLGNIYYANKEYKKAVEIYTRLLKEHPS
NPYILKNFLTIISQYDPDLALSEMLKLYDIHKNYAPLLANLGLIYMKKEDYVKGKEYMITAISLDENNIFYTYNLAVILD
KLSDFQNATIFYLKLLNMATTSKDVSEKIPLYKVTARLKFIKLHSTHPKIS

Sequences:

>Translated_291_residues
MLHIAQRNKVYWLHAAANATTLGPMFICMLICVVILWRSSVTYASENLEIQKAFDSVVKHIKADKKYKDLDVIERKSDKF
NIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYHKNALIGLGNIYYANKEYKKAVEIYTRLLKEHPS
NPYILKNFLTIISQYDPDLALSEMLKLYDIHKNYAPLLANLGLIYMKKEDYVKGKEYMITAISLDENNIFYTYNLAVILD
KLSDFQNATIFYLKLLNMATTSKDVSEKIPLYKVTARLKFIKLHSTHPKIS
>Mature_291_residues
MLHIAQRNKVYWLHAAANATTLGPMFICMLICVVILWRSSVTYASENLEIQKAFDSVVKHIKADKKYKDLDVIERKSDKF
NIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYHKNALIGLGNIYYANKEYKKAVEIYTRLLKEHPS
NPYILKNFLTIISQYDPDLALSEMLKLYDIHKNYAPLLANLGLIYMKKEDYVKGKEYMITAISLDENNIFYTYNLAVILD
KLSDFQNATIFYLKLLNMATTSKDVSEKIPLYKVTARLKFIKLHSTHPKIS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33505; Mature: 33505

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIAQRNKVYWLHAAANATTLGPMFICMLICVVILWRSSVTYASENLEIQKAFDSVVKH
CCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHH
IKADKKYKDLDVIERKSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQI
HHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IAKFPYHKNALIGLGNIYYANKEYKKAVEIYTRLLKEHPSNPYILKNFLTIISQYDPDLA
HHHCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LSEMLKLYDIHKNYAPLLANLGLIYMKKEDYVKGKEYMITAISLDENNIFYTYNLAVILD
HHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHH
KLSDFQNATIFYLKLLNMATTSKDVSEKIPLYKVTARLKFIKLHSTHPKIS
HHHHHCCCHHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MLHIAQRNKVYWLHAAANATTLGPMFICMLICVVILWRSSVTYASENLEIQKAFDSVVKH
CCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHH
IKADKKYKDLDVIERKSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQI
HHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IAKFPYHKNALIGLGNIYYANKEYKKAVEIYTRLLKEHPSNPYILKNFLTIISQYDPDLA
HHHCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LSEMLKLYDIHKNYAPLLANLGLIYMKKEDYVKGKEYMITAISLDENNIFYTYNLAVILD
HHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHH
KLSDFQNATIFYLKLLNMATTSKDVSEKIPLYKVTARLKFIKLHSTHPKIS
HHHHHCCCHHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA