Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630845

Identifier: 225630845

GI number: 225630845

Start: 1241244

End: 1241732

Strand: Reverse

Name: 225630845

Synonym: WRi_011510

Alternate gene names: NA

Gene position: 1241732-1241244 (Counterclockwise)

Preceding gene: 225630848

Following gene: 225630837

Centisome position: 85.88

GC content: 37.22

Gene sequence:

>489_bases
ATGAATAAGTCTGTTACACTATCCCTCACGTTATCCCAGTGCGTGACACTGGGATCTTGGTTCAGTACTATTATCCTATT
GTTTTTATTATTTAGCCATAGCTTGTTTGCTAACAACTTTGTTTCAACCAAATCAAATAAGATCAACATGAGAACGGGGC
CAGGGTTTCACTATCCTGTAAAATGGATATACACTTGCAAAAATCTGCCCCTGAAAGTGATAGAAGAGTTTGAGAGTTGG
AAAAAGGTCTGCGATATAGATGAAGACTGCGGATGGATAAAAGGCAATCTTCTTAGTGATAAGCGCTACGCGATTGTAAA
AGAAGATACTTATGGATATCAAAAACAGAGTGTAGACAGCAAGATTACTATGAAAATAGACAAGTTTGTTGTGATGAAGA
TAGAAAAATGCAACGAAGAATGGTGCTTTCTTTCCACCCCAAAACGCAAAGCATGGGTACAAAAAAAACATATATATGGG
GTTGATTAG

Upstream 100 bases:

>100_bases
AGCAGGCATTAATATTTCTATAGGCATTGATTTTGCATTTAAAGATCTATTCAATTTTTAATTTACTCTTTATCTTATGT
CAACCTAATCGTGAATTATG

Downstream 100 bases:

>100_bases
GTTGACAAAAGATCTGAATTAACACTAGTTTCTGGGCCTTCTGTAGCATGCTCTTCAGATGAAGCAGAGGGTTCTTGAGG
CTCTGGAGACTGTACAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESW
KKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYGYQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYG
VD

Sequences:

>Translated_162_residues
MNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESW
KKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYGYQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYG
VD
>Mature_162_residues
MNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESW
KKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYGYQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYG
VD

Specific function: Unknown

COG id: COG3807

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18896; Mature: 18896

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYPV
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCE
KWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYGYQKQSVDS
EEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCEECCCEEEEEECCCCCCHHHCCCC
KITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYGVD
EEEEEEHHEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYPV
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCE
KWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYGYQKQSVDS
EEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCEECCCEEEEEECCCCCCHHHCCCC
KITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYGVD
EEEEEEHHEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA