| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630836
Identifier: 225630836
GI number: 225630836
Start: 1229685
End: 1229972
Strand: Reverse
Name: 225630836
Synonym: WRi_011420
Alternate gene names: NA
Gene position: 1229972-1229685 (Counterclockwise)
Preceding gene: 225630837
Following gene: 225630835
Centisome position: 85.07
GC content: 32.64
Gene sequence:
>288_bases ATGTCGAAGACAGTTAAACTAATTTTGTGTTTAATAATACCAATAATAGGATTTATTTTTTATATTAAGGATCATTATTT TCACACCGGCTATGTAGAAGAAAATGTTGAAGTCAATTTTGAACCATTTTTCAGTTCACAACCAGCCACCGTTTCAGAAT TAACTGACTTCGATAGAGGAGTGTTGAAAGTTTGTGGAGATTGGGGAGCACATCCAGATAAAGAAGATTTCAAAATTTTA CTTAGTTGTCCGCAGCATCAAGAAGTAGTGAAAGGAATATATAAGTGA
Upstream 100 bases:
>100_bases AGTGGCGATGAAATGCCGGGAGTTGCTGCTCTGCAAAAACGATTAGATTAAAACTTTTTTAAATTATTTCTTATAGGCTA GCTTTTTTGTGAACGTGATT
Downstream 100 bases:
>100_bases TTACGCCAGATGCGGATTTGGAGTTACTTAAAGATGAACTGGCTAACATTTGGTTTACAAATAGTGGAAGTGAAAAAGAA ACTATAGGGTTTGGACATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSKTVKLILCLIIPIIGFIFYIKDHYFHTGYVEENVEVNFEPFFSSQPATVSELTDFDRGVLKVCGDWGAHPDKEDFKIL LSCPQHQEVVKGIYK
Sequences:
>Translated_95_residues MSKTVKLILCLIIPIIGFIFYIKDHYFHTGYVEENVEVNFEPFFSSQPATVSELTDFDRGVLKVCGDWGAHPDKEDFKIL LSCPQHQEVVKGIYK >Mature_94_residues SKTVKLILCLIIPIIGFIFYIKDHYFHTGYVEENVEVNFEPFFSSQPATVSELTDFDRGVLKVCGDWGAHPDKEDFKILL SCPQHQEVVKGIYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10925; Mature: 10794
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVKLILCLIIPIIGFIFYIKDHYFHTGYVEENVEVNFEPFFSSQPATVSELTDFDRG CCHHHHHHHHHHHHHHHHHHHHHHCCEECCEECCCCEEEECCCCCCCCCCHHHHHHHHHH VLKVCGDWGAHPDKEDFKILLSCPQHQEVVKGIYK HHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHCC >Mature Secondary Structure SKTVKLILCLIIPIIGFIFYIKDHYFHTGYVEENVEVNFEPFFSSQPATVSELTDFDRG CHHHHHHHHHHHHHHHHHHHHHHCCEECCEECCCCEEEECCCCCCCCCCHHHHHHHHHH VLKVCGDWGAHPDKEDFKILLSCPQHQEVVKGIYK HHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA