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The map label for this gene is petB [H]

Identifier: 225630803

GI number: 225630803

Start: 1196682

End: 1197911

Strand: Reverse

Name: petB [H]

Synonym: WRi_011070

Alternate gene names: 225630803

Gene position: 1197911-1196682 (Counterclockwise)

Preceding gene: 225630804

Following gene: 225630802

Centisome position: 82.85

GC content: 36.83

Gene sequence:

>1230_bases
ATGCAGGAAGATAACAAAAAAGAAACAATAAAAGAAGAAAAAGGCATATTAGGATGGATAGAATATAGATTGCCTATATT
TTCTTTTCTAAGACACACTGCTTCTTACCAAGTGCCAAAAAACTTAAATTATGCTTGGAACTTTGGCTCTTTGGCTGGTA
TAGCGCTGATTTTACAAATAATAACAGGTATATTTCTTGCTATGCACTACACTCCGCATGTTGATTATGCGTTTAATAGT
GTAGAGCGCATAATGCGAGATGTGAATTACGGGTGGTTAATACGCTACACTCACGCTGTTGGAGCATCGCTCTTCTTTAT
GGTAGTCTATGTTCATATAATGCGTGGATTATATTACGGATCTTATAAAAGACCGAGAGAGATGGTGTGGTTTATTGGAA
TATTTATATTTTTTGCAATGATGGCAACTGCCTTTATGGGATATGTATTGCCTTGGGGACAAATGAGTTTCTGGGGTGCA
ACAGTTATAACCAACTTATTTTCTGCTATACCTTTAATTGGCAATAAAATAGTTATATGGTTATGGGGTGGTTTTTCAGT
GGATAACCCAACCCTTAACCGTTTTTTCGCTCTGCATTATCTTCTGCCTTTTGTTATTATTGCTTTAGCTATGCTTCATG
TGATAGCTCTGCATAGGTTTGGCTCTGGTAACCCAAGTGGAGTGGAGGTAAAATCAGATAAGGATACCATCCCTCTCTAT
CCTTATTATATAGTCAAGGATTGCATAACTTTTGGTCTGTTTTTTGTAGTTTTGTTCGCATTTGTTTTCTATGCTCCCAA
TTATCTTGGGCATCCAGACAATTATATAGAAGCTGATTCTATGGTCACTCCGGTACATATAGTGCCAGAGTGGTATTTTT
TACCTTTTTATGCAATGCTACGTTCAATTCCAGATAAACTTACTGGTGTGCTTACCATGTTTGCGTCTATTTTAGTGTGG
TTTTTGTTACCTTGGCTTGATAAATCAAAAGTTAAAAGTGGTGCTTATCGCCCGGTGTTTAAGAAATTTTTTTGGGTTTT
TGCAATAAATTTTGTACTTCTTGCCTGGCTTGGAGGACAAGAGGTAAAAGAGCCTTACATCACTATGAGTAGGCTATCTA
CTCTTTATTACTTTGCATACTTTGTGATAGTTTTACCACTGCTTAGTAAGTATGAAAAGCCAAAAGAACCACCAAAAACC
TTAAGTGATTCTGTGCCGGAGATGAGGTGA

Upstream 100 bases:

>100_bases
TATTGCTTTAAAGTTTTTATTTGTGCGTAAAGGATAAGTTGCTACAATAAAAAAATAAGATAAAAGTAGCAATGGACATG
TGTTCAGAAAGGTTTAAGTT

Downstream 100 bases:

>100_bases
TGTCAATTCAAAGCAGATCTCTTACAAAATTCTCTGTCATCCCAGAGCTCTCTTCTGTCATCCCAGAGCCCTCTTTTGTC
ATCCCAGTGCTTGACACTGG

Product: ubiquinol-cytochrome c reductase, cytochrome b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MQEDNKKETIKEEKGILGWIEYRLPIFSFLRHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDYAFNS
VERIMRDVNYGWLIRYTHAVGASLFFMVVYVHIMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGA
TVITNLFSAIPLIGNKIVIWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHVIALHRFGSGNPSGVEVKSDKDTIPLY
PYYIVKDCITFGLFFVVLFAFVFYAPNYLGHPDNYIEADSMVTPVHIVPEWYFLPFYAMLRSIPDKLTGVLTMFASILVW
FLLPWLDKSKVKSGAYRPVFKKFFWVFAINFVLLAWLGGQEVKEPYITMSRLSTLYYFAYFVIVLPLLSKYEKPKEPPKT
LSDSVPEMR

Sequences:

>Translated_409_residues
MQEDNKKETIKEEKGILGWIEYRLPIFSFLRHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDYAFNS
VERIMRDVNYGWLIRYTHAVGASLFFMVVYVHIMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGA
TVITNLFSAIPLIGNKIVIWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHVIALHRFGSGNPSGVEVKSDKDTIPLY
PYYIVKDCITFGLFFVVLFAFVFYAPNYLGHPDNYIEADSMVTPVHIVPEWYFLPFYAMLRSIPDKLTGVLTMFASILVW
FLLPWLDKSKVKSGAYRPVFKKFFWVFAINFVLLAWLGGQEVKEPYITMSRLSTLYYFAYFVIVLPLLSKYEKPKEPPKT
LSDSVPEMR
>Mature_409_residues
MQEDNKKETIKEEKGILGWIEYRLPIFSFLRHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDYAFNS
VERIMRDVNYGWLIRYTHAVGASLFFMVVYVHIMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGA
TVITNLFSAIPLIGNKIVIWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHVIALHRFGSGNPSGVEVKSDKDTIPLY
PYYIVKDCITFGLFFVVLFAFVFYAPNYLGHPDNYIEADSMVTPVHIVPEWYFLPFYAMLRSIPDKLTGVLTMFASILVW
FLLPWLDKSKVKSGAYRPVFKKFFWVFAINFVLLAWLGGQEVKEPYITMSRLSTLYYFAYFVIVLPLLSKYEKPKEPPKT
LSDSVPEMR

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=370, Percent_Identity=50.8108108108108, Blast_Score=367, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6226529, Length=355, Percent_Identity=56.6197183098592, Blast_Score=400, Evalue=1e-112,
Organism=Saccharomyces cerevisiae, GI6226532, Length=233, Percent_Identity=57.9399141630901, Blast_Score=280, Evalue=3e-76,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=59.8684210526316, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6226530, Length=136, Percent_Identity=52.2058823529412, Blast_Score=146, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 47459; Mature: 47459

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]