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The map label for this gene is petC [H]

Identifier: 225630802

GI number: 225630802

Start: 1195555

End: 1196313

Strand: Reverse

Name: petC [H]

Synonym: WRi_011060

Alternate gene names: 225630802

Gene position: 1196313-1195555 (Counterclockwise)

Preceding gene: 225630803

Following gene: 225630801

Centisome position: 82.74

GC content: 36.1

Gene sequence:

>759_bases
ATGGGATCTAATGTATTTGCAATCTTCTGCATGTTATTTCTATCTAGTCTTATATCTGCAGAAGAATTTAAATCATTACC
AAATAAGAAAATAGACTGGAAATTTGATGGAATTGTCGGATCTTTCGATAGAGAGTCAATTCAGCGTGGCTATAAAGTGT
ATAAAGAAGTCTGTGCTGCTTGTCATTCAATGAATAGGGTAGCATTTCGTAATTTGCAAGATGTCGGTTTTTCTGAAGAA
GATGTAAAACAAATAGCAGCTTCTTATCAAGTTAAAGATGGTCCGAATGATTTGGGTGAAATGTTTGACAGACCTGGAGT
ACCTTCGGATTATTTTATTGCGCCTTTTGATACAAAAGAAGCAGCTGCAGCAAGCAACAATGGTGCAGTCCCACCAGACT
TATCATTAATTATTAAAGCAAGGCATGATGGTGCAAATTATGTCTATTCATTGTTAACAGGCTATCAAAACGGCGAACAC
GATGAAAATGATTTATATTTTAATTCGTATTTTCCAACAGGCAGATTAGCTATGGCGCCACCACTTTCTGAAGGAATGGT
GGAATATGATGGTGCAAGGCAAGCCACAGTTGAAAATATGGCGTATGATGTGATAAATTTTTTACAATGGGCAGCAGAGC
CAGAATTAGAGCGCCGGCATAAACTTGGATTAAAAGTAGTGGCGTATTTTATAATTTTAACAGTGTTTTTTGTATTAACT
AACAACAAAGTTTGGAGCAAGCTCTATAAAAAGAAGTGA

Upstream 100 bases:

>100_bases
AGTGCATGATAACCATAATGTCAGTGATGAAATAAGCTGGATTCCAGTGTCAGCTACTTGCATGACATCAATTCGAAATT
TACTAAAACAGTGGTTATGC

Downstream 100 bases:

>100_bases
TAGTCAATTTTGCCTCAAGCACAATGGTTGTCATCCAAGTAGCTAACACTGGTTCCTTTATGACGGTGTCATCCGAGTAG
CTGACACTGGGATGGCTTTG

Product: ubiquinol-cytochrome c reductase, cytochrome c1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGSNVFAIFCMLFLSSLISAEEFKSLPNKKIDWKFDGIVGSFDRESIQRGYKVYKEVCAACHSMNRVAFRNLQDVGFSEE
DVKQIAASYQVKDGPNDLGEMFDRPGVPSDYFIAPFDTKEAAAASNNGAVPPDLSLIIKARHDGANYVYSLLTGYQNGEH
DENDLYFNSYFPTGRLAMAPPLSEGMVEYDGARQATVENMAYDVINFLQWAAEPELERRHKLGLKVVAYFIILTVFFVLT
NNKVWSKLYKKK

Sequences:

>Translated_252_residues
MGSNVFAIFCMLFLSSLISAEEFKSLPNKKIDWKFDGIVGSFDRESIQRGYKVYKEVCAACHSMNRVAFRNLQDVGFSEE
DVKQIAASYQVKDGPNDLGEMFDRPGVPSDYFIAPFDTKEAAAASNNGAVPPDLSLIIKARHDGANYVYSLLTGYQNGEH
DENDLYFNSYFPTGRLAMAPPLSEGMVEYDGARQATVENMAYDVINFLQWAAEPELERRHKLGLKVVAYFIILTVFFVLT
NNKVWSKLYKKK
>Mature_251_residues
GSNVFAIFCMLFLSSLISAEEFKSLPNKKIDWKFDGIVGSFDRESIQRGYKVYKEVCAACHSMNRVAFRNLQDVGFSEED
VKQIAASYQVKDGPNDLGEMFDRPGVPSDYFIAPFDTKEAAAASNNGAVPPDLSLIIKARHDGANYVYSLLTGYQNGEHD
ENDLYFNSYFPTGRLAMAPPLSEGMVEYDGARQATVENMAYDVINFLQWAAEPELERRHKLGLKVVAYFIILTVFFVLTN
NKVWSKLYKKK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21359867, Length=240, Percent_Identity=45.4166666666667, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17506225, Length=219, Percent_Identity=41.5525114155251, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6324639, Length=222, Percent_Identity=46.3963963963964, Blast_Score=202, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24658292, Length=223, Percent_Identity=43.9461883408072, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI21358225, Length=226, Percent_Identity=41.5929203539823, Blast_Score=174, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: NA

Molecular weight: Translated: 28441; Mature: 28309

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNVFAIFCMLFLSSLISAEEFKSLPNKKIDWKFDGIVGSFDRESIQRGYKVYKEVCAA
CCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
CHSMNRVAFRNLQDVGFSEEDVKQIAASYQVKDGPNDLGEMFDRPGVPSDYFIAPFDTKE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCHH
AAAASNNGAVPPDLSLIIKARHDGANYVYSLLTGYQNGEHDENDLYFNSYFPTGRLAMAP
HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEECC
PLSEGMVEYDGARQATVENMAYDVINFLQWAAEPELERRHKLGLKVVAYFIILTVFFVLT
CHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NNKVWSKLYKKK
CCHHHHHHHHCC
>Mature Secondary Structure 
GSNVFAIFCMLFLSSLISAEEFKSLPNKKIDWKFDGIVGSFDRESIQRGYKVYKEVCAA
CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
CHSMNRVAFRNLQDVGFSEEDVKQIAASYQVKDGPNDLGEMFDRPGVPSDYFIAPFDTKE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCHH
AAAASNNGAVPPDLSLIIKARHDGANYVYSLLTGYQNGEHDENDLYFNSYFPTGRLAMAP
HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEECC
PLSEGMVEYDGARQATVENMAYDVINFLQWAAEPELERRHKLGLKVVAYFIILTVFFVLT
CHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NNKVWSKLYKKK
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]