| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630785
Identifier: 225630785
GI number: 225630785
Start: 1179882
End: 1180925
Strand: Direct
Name: 225630785
Synonym: WRi_010880
Alternate gene names: NA
Gene position: 1179882-1180925 (Clockwise)
Preceding gene: 225630784
Following gene: 225630788
Centisome position: 81.6
GC content: 30.84
Gene sequence:
>1044_bases GTGGCTAGAAATGTTTTGAATGAAAATGAGTACCACGCTTTAAAGCAGTTGTTTTTAACATTTAATATTCAAAAGGAGGA TGTGGTAAATTCTGACATTAAGCATATTAAGAAAAAGCTTAGTCAACAATACCGTAAATTATCGTTAAAATATCATTCAG ATAAAAACCCAAACAATAAAGAAGCGGAGGAGAAATTTAAGGTTATTGCATTAAATAAGCCATTTTTTGAAGAATTTATA ATAGAGCCATTGGAGAAAGGTCTCAATAAAAGAAATAATTTAATAAAAGAATTACGCGGTAAGTTGTGGAGTCGCAGTTA TGAAGAATTGCAAAAATACTTAGATGATAAGTGCAGAAATAAACTCTATAATAAGCAGCAGTCAATTAACAATAATGTAA CTGCTTATGTAAAATATTCTTCTTATTCAAATCTCTTAGGAGTTCTTTTAGTATCCTTCACATCAATTGCATTTTTAATA ATTAATGGTATTTCTTCTAATGTACCAATAGCAGTAGGTTTTCTTGCTCCCTTGTTAGCAGGATCTATTTTGAGTCTAGC TGTTAAGAGCATTTATACTAGAAATGGGAAAGAGTTTAATCATCAGACTAATATTTTATTATTGTTTAACTTTGACCAAG AATGCGAAAATTTTTCAAAGAGTGATAGGACTAAATTAAAGTGGCTAAAAAATTCAGTTATTTTGAGCAACACAATCTGT ACACCTTTAATGTTTTTCAGTGTGGGATTAGATTTAGTTGCCAACGGCTTTGGTATAACTAACTCTATGATGTTATCCGG CTTATTACTTTCATTACCATTCACGCTTTTAATTGTTACTTCACCTATTTTAAATGCTGCAAGTAATTATATTCTCAAAA AGACAGCTATAAATTCAATTGAGGAGCAATTTAAAGGTGATGATCAGTTTATAGAAGTCGGTAACGAAAAGCCAAGCAGT ACTATGAGCAATCAAAGTTATTTCCCCATCGGTCAGTTAATATCATCAAAGTTAGCTATTCTCCATAGCGAAGTCTCTAG CTAG
Upstream 100 bases:
>100_bases ATTACTTCTCTTGCCAGCTCCACAATTAAACAACTCTGCAATGTCTCCTATTTGACTGGCCAACAATGAGAGTTGGTATT AGTTAATTTGTAGGTGTAAT
Downstream 100 bases:
>100_bases GAACAATGAGCCACAGATCAGTATGGTTTTGACGTTTTGGATAGAGGCTTTTAATATGTGATTTGATATTGCATCGCCAA TTGACTCACACTCAATTGCT
Product: DnaJ domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MARNVLNENEYHALKQLFLTFNIQKEDVVNSDIKHIKKKLSQQYRKLSLKYHSDKNPNNKEAEEKFKVIALNKPFFEEFI IEPLEKGLNKRNNLIKELRGKLWSRSYEELQKYLDDKCRNKLYNKQQSINNNVTAYVKYSSYSNLLGVLLVSFTSIAFLI INGISSNVPIAVGFLAPLLAGSILSLAVKSIYTRNGKEFNHQTNILLLFNFDQECENFSKSDRTKLKWLKNSVILSNTIC TPLMFFSVGLDLVANGFGITNSMMLSGLLLSLPFTLLIVTSPILNAASNYILKKTAINSIEEQFKGDDQFIEVGNEKPSS TMSNQSYFPIGQLISSKLAILHSEVSS
Sequences:
>Translated_347_residues MARNVLNENEYHALKQLFLTFNIQKEDVVNSDIKHIKKKLSQQYRKLSLKYHSDKNPNNKEAEEKFKVIALNKPFFEEFI IEPLEKGLNKRNNLIKELRGKLWSRSYEELQKYLDDKCRNKLYNKQQSINNNVTAYVKYSSYSNLLGVLLVSFTSIAFLI INGISSNVPIAVGFLAPLLAGSILSLAVKSIYTRNGKEFNHQTNILLLFNFDQECENFSKSDRTKLKWLKNSVILSNTIC TPLMFFSVGLDLVANGFGITNSMMLSGLLLSLPFTLLIVTSPILNAASNYILKKTAINSIEEQFKGDDQFIEVGNEKPSS TMSNQSYFPIGQLISSKLAILHSEVSS >Mature_346_residues ARNVLNENEYHALKQLFLTFNIQKEDVVNSDIKHIKKKLSQQYRKLSLKYHSDKNPNNKEAEEKFKVIALNKPFFEEFII EPLEKGLNKRNNLIKELRGKLWSRSYEELQKYLDDKCRNKLYNKQQSINNNVTAYVKYSSYSNLLGVLLVSFTSIAFLII NGISSNVPIAVGFLAPLLAGSILSLAVKSIYTRNGKEFNHQTNILLLFNFDQECENFSKSDRTKLKWLKNSVILSNTICT PLMFFSVGLDLVANGFGITNSMMLSGLLLSLPFTLLIVTSPILNAASNYILKKTAINSIEEQFKGDDQFIEVGNEKPSST MSNQSYFPIGQLISSKLAILHSEVSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39375; Mature: 39244
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNVLNENEYHALKQLFLTFNIQKEDVVNSDIKHIKKKLSQQYRKLSLKYHSDKNPNNK CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EAEEKFKVIALNKPFFEEFIIEPLEKGLNKRNNLIKELRGKLWSRSYEELQKYLDDKCRN CHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KLYNKQQSINNNVTAYVKYSSYSNLLGVLLVSFTSIAFLIINGISSNVPIAVGFLAPLLA HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH GSILSLAVKSIYTRNGKEFNHQTNILLLFNFDQECENFSKSDRTKLKWLKNSVILSNTIC HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH TPLMFFSVGLDLVANGFGITNSMMLSGLLLSLPFTLLIVTSPILNAASNYILKKTAINSI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEQFKGDDQFIEVGNEKPSSTMSNQSYFPIGQLISSKLAILHSEVSS HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARNVLNENEYHALKQLFLTFNIQKEDVVNSDIKHIKKKLSQQYRKLSLKYHSDKNPNNK CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EAEEKFKVIALNKPFFEEFIIEPLEKGLNKRNNLIKELRGKLWSRSYEELQKYLDDKCRN CHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KLYNKQQSINNNVTAYVKYSSYSNLLGVLLVSFTSIAFLIINGISSNVPIAVGFLAPLLA HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH GSILSLAVKSIYTRNGKEFNHQTNILLLFNFDQECENFSKSDRTKLKWLKNSVILSNTIC HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH TPLMFFSVGLDLVANGFGITNSMMLSGLLLSLPFTLLIVTSPILNAASNYILKKTAINSI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEQFKGDDQFIEVGNEKPSSTMSNQSYFPIGQLISSKLAILHSEVSS HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA